RefSeq NZ_LN999010.1
DoriC accession number aORI10010326
OriC length 807 nt
OriC AT content 0.347
The location of oriC region 247894..248700 nt
Browse in NCBI
OriC map
OriC sequences
ACGTTTCTATTTTTATCTTAAAACCCCCAGAGTTTCATTTCCACTGGAACTTCTCTGGGAAGGTATCTACCAAAAATTTTCCCAGGGGTTCAGGTGTTTACAAACTCACAGTATATGACACATGTCATCTTTACATTGATCAATAACCATTTGTTTATTTAATGTACGTTTTTGTACATCCAAATTATCCACTTTTTCATTAGAAACATTACCTTGCTTATAAAATGTTCAAAGAAAATTATTTAAATAGAAGATTGAGCTAATATGGGAGAGTGTTTGTAAGGGATAAAAATTAATTATTCTGGTGTTTGCCAGTGAGTTCCACTGGAAATGAAACTCTGGGGGGTTTCACTTCTGTTTAACTTTGACTGAACTTTTAATCAAACATGCTTAACAAAATTGGGCAAAAGTGTGTAAAGATGTCTCAGTTTTCATGTACAAATCTGTTCATTGGATTTCCACAGGAAATTTTCTTGTACATTGCTCTTTGTAAATCCTGTCACATGAAGCATCCTGGGGCTCCTGAGGAATTTCCTGTGAAAGTCTTTCATATGAAATATATTTCAAATCTTGTTTTGACATGCATGTGTATAAGCAAAGCATAAAAACTCCGAGTGAAAGATAACCGTTGCTTTCCACTGGTTCGTGTGCTTCCTGTGGAAATAATACTCATGATGTGATAGTTCCACCTGAAAATCATGTCTTAATGTCATACTCATTTAAAGTTAGTTAACAAAATGAGTTCCATTTCCAGTGGAAATGGAGGTCATGTCATTAAAAAGCATGATTTCCAATGGAGGGACACCG
ACGTTTCTATTTTTATCTTAAAACCCCCAGAGTTTCATTTCCACTGGAACTTCTCTGGGAAGGTATCTACCAAAAATTTTCCCAGGGGTTCAGGTGTTTACAAACTCACAGTATATGACACATGTCATCTTTACATTGATCAATAACCATTTGTTTATTTAATGTACGTTTTTGTACATCCAAATTATCCACTTTTTCATTAGAAACATTACCTTGCTTATAAAATGTTCAAAGAAAATTATTTAAATAGAAGATTGAGCTAATATGGGAGAGTGTTTGTAAGGGATAAAAATTAATTATTCTGGTGTTTGCCAGTGAGTTCCACTGGAAATGAAACTCTGGGGGGTTTCACTTCTGTTTAACTTTGACTGAACTTTTAATCAAACATGCTTAACAAAATTGGGCAAAAGTGTGTAAAGATGTCTCAGTTTTCATGTACAAATCTGTTCATTGGATTTCCACAGGAAATTTTCTTGTACATTGCTCTTTGTAAATCCTGTCACATGAAGCATCCTGGGGCTCCTGAGGAATTTCCTGTGAAAGTCTTTCATATGAAATATATTTCAAATCTTGTTTTGACATGCATGTGTATAAGCAAAGCATAAAAACTCCGAGTGAAAGATAACCGTTGCTTTCCACTGGTTCGTGTGCTTCCTGTGGAAATAATACTCATGATGTGATAGTTCCACCTGAAAATCATGTCTTAATGTCATACTCATTTAAAGTTAGTTAACAAAATGAGTTCCATTTCCAGTGGAAATGGAGGTCATGTCATTAAAAAGCATGATTTCCAATGGAGGGACACCG
ACGTTTCTATTTTTATCTTAAAACCCCCAGAGTTTCATTTCCACTGGAACTTCTCTGGGAAGGTATCTACCAAAAATTTTCCCAGGGGTTCAGGTGTTTACAAACTCACAGTATATGACACATGTCATCTTTACATTGATCAATAACCATTTGTTTATTTAATGTACGTTTTTGTACATCCAAATTATCCACTTTTTCATTAGAAACATTACCTTGCTTATAAAATGTTCAAAGAAAATTATTTAAATAGAAGATTGAGCTAATATGGGAGAGTGTTTGTAAGGGATAAAAATTAATTATTCTGGTGTTTGCCAGTGAGTTCCACTGGAAATGAAACTCTGGGGGGTTTCACTTCTGTTTAACTTTGACTGAACTTTTAATCAAACATGCTTAACAAAATTGGGCAAAAGTGTGTAAAGATGTCTCAGTTTTCATGTACAAATCTGTTCATTGGATTTCCACAGGAAATTTTCTTGTACATTGCTCTTTGTAAATCCTGTCACATGAAGCATCCTGGGGCTCCTGAGGAATTTCCTGTGAAAGTCTTTCATATGAAATATATTTCAAATCTTGTTTTGACATGCATGTGTATAAGCAAAGCATAAAAACTCCGAGTGAAAGATAACCGTTGCTTTCCACTGGTTCGTGTGCTTCCTGTGGAAATAATACTCATGATGTGATAGTTCCACCTGAAAATCATGTCTTAATGTCATACTCATTTAAAGTTAGTTAACAAAATGAGTTCCATTTCCAGTGGAAATGGAGGTCATGTCATTAAAAAGCATGATTTCCAATGGAGGGACACCG
ORB     AT-rich region
The information of repeat sequences

Motif SATTTCCACTGGAA

StartP-valueSite
366.82e-09CCCAGAGTTTCATTTCCACTGGAACTTCTCTGGG
3178.62e-09GTTTGCCAGTGAGTTCCACTGGAAATGAAACTCT
4542.10e-08CTGTTCATTGGATTTCCACAGGAAATTTTCTTGT
7462.45e-08AAATGAGTTCCATTTCCAGTGGAAATGGAGGTCA
7866.65e-08TAAAAAGCATGATTTCCAATGGAGGGACACCG

Motif CCWSKGGTTCVKGWG

StartP-valueSite
821.48e-09AAAAATTTTCCCAGGGGTTCAGGTGTTTACAAACT
5136.03e-09CATGAAGCATCCTGGGGCTCCTGAGGAATTTCCTG
6361.03e-08CCGTTGCTTTCCACTGGTTCGTGTGCTTCCTGTGG

Motif AAACTCMSAG

StartP-valueSite
216.80e-07TTTTATCTTAAAACCCCCAGAGTTTCATTT
6061.39e-06CAAAGCATAAAAACTCCGAGTGAAAGATAA
1022.62e-06AGGTGTTTACAAACTCACAGTATATGACAC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010326 100.0 807 0 0 1 807 1 807 0.0 1491
aORI10010307 100.0 807 0 0 1 807 1 807 0.0 1491
aORI10010295 92.45 808 60 1 1 807 1 808 0.0 1153
aORI10010295 96.875 32 1 0 20 51 350 319 8.15e-09 55
aORI10010121 72.869 833 155 55 4 804 62 855 0.0 220
aORI10010121 96.875 32 1 0 20 51 401 370 8.15e-09 55
aORI10010101 83.942 137 17 5 233 365 543 408 1.7e-30 126
aORI10010101 90.196 51 5 0 2 52 774 724 1.05e-12 68
aORI10010003 100.0 31 0 0 318 348 706 736 6.3e-10 58
aORI10010369 96.97 33 1 0 19 51 141 173 2.27e-09 57
aORI10010262 94.595 37 1 1 15 50 161 197 2.27e-09 57