RefSeq NC_017445.1
Accession number NC_017445.1
DoriC accession number ORI96000391
OriC length 467 nt
OriC AT content 0.54818
The location of oriC region 1279982..1280448 nt
Browse in NCBI
OriC map
OriC sequences
gidAGGTACTGCACCTCGCGGCTTGTGCGAATTAAGGGGATGTTGCTGAGGGCGTGGATTCTACTCAACTTTAGACGATGGGGAAAGCATCGGGATCGTCGTGTATTAAAAAGAAGATCTTTTTTATTTAGAGATCTCTTTATTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCGGTTTTACTGATAACGATCAACTTATTAGAGACGATCGTTAGCTGTTAACGGTCGGTGATCCTGAACCGTATAAGCTGGGATCTAAATGGCATGTTATGCACAGGCTCAGGGAGGATGCCAGGTTGTTATTGGGATAATAACCGGTTTTCACCCGGTAGTTAGCCATGTTATCCACAGAAAAAGGCGTAAAAAAGCCGTTAAAAAGCGAAATATTTACAAAACCCGGCGTGGGAAACGGAGATTTCAGGGGGATCGGAAAGACGATCGCTGACCGATCCCTTGCCGGTmioC
gidAGGTACTGCACCTCGCGGCTTGTGCGAATTAAGGGGATGTTGCTGAGGGCGTGGATTCTACTCAACTTTAGACGATGGGGAAAGCATCGGGATCGTCGTGTATTAAAAAGAAGATCTTTTTTATTTAGAGATCTCTTTATTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCGGTTTTACTGATAACGATCAACTTATTAGAGACGATCGTTAGCTGTTAACGGTCGGTGATCCTGAACCGTATAAGCTGGGATCTAAATGGCATGTTATGCACAGGCTCAGGGAGGATGCCAGGTTGTTATTGGGATAATAACCGGTTTTCACCCGGTAGTTAGCCATGTTATCCACAGAAAAAGGCGTAAAAAAGCCGTTAAAAAGCGAAATATTTACAAAACCCGGCGTGGGAAACGGAGATTTCAGGGGGATCGGAAAGACGATCGCTGACCGATCCCTTGCCGGTmioC
gidAGGTACTGCACCTCGCGGCTTGTGCGAATTAAGGGGATGTTGCTGAGGGCGTGGATTCTACTCAACTTTAGACGATGGGGAAAGCATCGGGATCGTCGTGTATTAAAAAGAAGATCTTTTTTATTTAGAGATCTCTTTATTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCGGTTTTACTGATAACGATCAACTTATTAGAGACGATCGTTAGCTGTTAACGGTCGGTGATCCTGAACCGTATAAGCTGGGATCTAAATGGCATGTTATGCACAGGCTCAGGGAGGATGCCAGGTTGTTATTGGGATAATAACCGGTTTTCACCCGGTAGTTAGCCATGTTATCCACAGAAAAAGGCGTAAAAAAGCCGTTAAAAAGCGAAATATTTACAAAACCCGGCGTGGGAAACGGAGATTTCAGGGGGATCGGAAAGACGATCGCTGACCGATCCCTTGCCGGTmioC
gidAGGTACTGCACCTCGCGGCTTGTGCGAATTAAGGGGATGTTGCTGAGGGCGTGGATTCTACTCAACTTTAGACGATGGGGAAAGCATCGGGATCGTCGTGTATTAAAAAGAAGATCTTTTTTATTTAGAGATCTCTTTATTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCGGTTTTACTGATAACGATCAACTTATTAGAGACGATCGTTAGCTGTTAACGGTCGGTGATCCTGAACCGTATAAGCTGGGATCTAAATGGCATGTTATGCACAGGCTCAGGGAGGATGCCAGGTTGTTATTGGGATAATAACCGGTTTTCACCCGGTAGTTAGCCATGTTATCCACAGAAAAAGGCGTAAAAAAGCCGTTAAAAAGCGAAATATTTACAAAACCCGGCGTGGGAAACGGAGATTTCAGGGGGATCGGAAAGACGATCGCTGACCGATCCCTTGCCGGTmioC
gidAGGTACTGCACCTCGCGGCTTGTGCGAATTAAGGGGATGTTGCTGAGGGCGTGGATTCTACTCAACTTTAGACGATGGGGAAAGCATCGGGATCGTCGTGTATTAAAAAGAAGATCTTTTTTATTTAGAGATCTCTTTATTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCGGTTTTACTGATAACGATCAACTTATTAGAGACGATCGTTAGCTGTTAACGGTCGGTGATCCTGAACCGTATAAGCTGGGATCTAAATGGCATGTTATGCACAGGCTCAGGGAGGATGCCAGGTTGTTATTGGGATAATAACCGGTTTTCACCCGGTAGTTAGCCATGTTATCCACAGAAAAAGGCGTAAAAAAGCCGTTAAAAAGCGAAATATTTACAAAACCCGGCGTGGGAAACGGAGATTTCAGGGGGATCGGAAAGACGATCGCTGACCGATCCCTTGCCGGTmioC
gidAGGTACTGCACCTCGCGGCTTGTGCGAATTAAGGGGATGTTGCTGAGGGCGTGGATTCTACTCAACTTTAGACGATGGGGAAAGCATCGGGATCGTCGTGTATTAAAAAGAAGATCTTTTTTATTTAGAGATCTCTTTATTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCGGTTTTACTGATAACGATCAACTTATTAGAGACGATCGTTAGCTGTTAACGGTCGGTGATCCTGAACCGTATAAGCTGGGATCTAAATGGCATGTTATGCACAGGCTCAGGGAGGATGCCAGGTTGTTATTGGGATAATAACCGGTTTTCACCCGGTAGTTAGCCATGTTATCCACAGAAAAAGGCGTAAAAAAGCCGTTAAAAAGCGAAATATTTACAAAACCCGGCGTGGGAAACGGAGATTTCAGGGGGATCGGAAAGACGATCGCTGACCGATCCCTTGCCGGTmioC
gidAGGTACTGCACCTCGCGGCTTGTGCGAATTAAGGGGATGTTGCTGAGGGCGTGGATTCTACTCAACTTTAGACGATGGGGAAAGCATCGGGATCGTCGTGTATTAAAAAGAAGATCTTTTTTATTTAGAGATCTCTTTATTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCGGTTTTACTGATAACGATCAACTTATTAGAGACGATCGTTAGCTGTTAACGGTCGGTGATCCTGAACCGTATAAGCTGGGATCTAAATGGCATGTTATGCACAGGCTCAGGGAGGATGCCAGGTTGTTATTGGGATAATAACCGGTTTTCACCCGGTAGTTAGCCATGTTATCCACAGAAAAAGGCGTAAAAAAGCCGTTAAAAAGCGAAATATTTACAAAACCCGGCGTGGGAAACGGAGATTTCAGGGGGATCGGAAAGACGATCGCTGACCGATCCCTTGCCGGTmioC
gidaGGTACTGCACCTCGCGGCTTGTGCGAATTAAGGGGATGTTGCTGAGGGCGTGGATTCTACTCAACTTTAGACGATGGGGAAAGCATCGGGATCGTCGTGTATTAAAAAGAAGATCTTTTTTATTTAGAGATCTCTTTATTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCGGTTTTACTGATAACGATCAACTTATTAGAGACGATCGTTAGCTGTTAACGGTCGGTGATCCTGAACCGTATAAGCTGGGATCTAAATGGCATGTTATGCACAGGCTCAGGGAGGATGCCAGGTTGTTATTGGGATAATAACCGGTTTTCACCCGGTAGTTAGCCATGTTATCCACAGAAAAAGGCGTAAAAAAGCCGTTAAAAAGCGAAATATTTACAAAACCCGGCGTGGGAAACGGAGATTTCAGGGGGATCGGAAAGACGATCGCTGACCGATCCCTTGCCGGTmioc
gidAGGTACTGCACCTCGCGGCTTGTGCGAATTAAGGGGATGTTGCTGAGGGCGTGGATTCTACTCAACTTTAGACGATGGGGAAAGCATCGGGATCGTCGTGTATTAAAAAGAAGATCTTTTTTATTTAGAGATCTCTTTATTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCGGTTTTACTGATAACGATCAACTTATTAGAGACGATCGTTAGCTGTTAACGGTCGGTGATCCTGAACCGTATAAGCTGGGATCTAAATGGCATGTTATGCACAGGCTCAGGGAGGATGCCAGGTTGTTATTGGGATAATAACCGGTTTTCACCCGGTAGTTAGCCATGTTATCCACAGAAAAAGGCGTAAAAAAGCCGTTAAAAAGCGAAATATTTACAAAACCCGGCGTGGGAAACGGAGATTTCAGGGGGATCGGAAAGACGATCGCTGACCGATCCCTTGCCGGTmioC
gidAGGTACTGCACCTCGCGGCTTGTGCGAATTAAGGGGATGTTGCTGAGGGCGTGGATTCTACTCAACTTTAGACGATGGGGAAAGCATCGGGATCGTCGTGTATTAAAAAGAAGATCTTTTTTATTTAGAGATCTCTTTATTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCGGTTTTACTGATAACGATCAACTTATTAGAGACGATCGTTAGCTGTTAACGGTCGGTGATCCTGAACCGTATAAGCTGGGATCTAAATGGCATGTTATGCACAGGCTCAGGGAGGATGCCAGGTTGTTATTGGGATAATAACCGGTTTTCACCCGGTAGTTAGCCATGTTATCCACAGAAAAAGGCGTAAAAAAGCCGTTAAAAAGCGAAATATTTACAAAACCCGGCGTGGGAAACGGAGATTTCAGGGGGATCGGAAAGACGATCGCTGACCGATCCCTTGCCGGTmioC
gidAGGTACTGCACCTCGCGGCTTGTGCGAATTAAGGGGATGTTGCTGAGGGCGTGGATTCTACTCAACTTTAGACGATGGGGAAAGCATCGGGATCGTCGTGTATTAAAAAGAAGATCTTTTTTATTTAGAGATCTCTTTATTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCGGTTTTACTGATAACGATCAACTTATTAGAGACGATCGTTAGCTGTTAACGGTCGGTGATCCTGAACCGTATAAGCTGGGATCTAAATGGCATGTTATGCACAGGCTCAGGGAGGATGCCAGGTTGTTATTGGGATAATAACCGGTTTTCACCCGGTAGTTAGCCATGTTATCCACAGAAAAAGGCGTAAAAAAGCCGTTAAAAAGCGAAATATTTACAAAACCCGGCGTGGGAAACGGAGATTTCAGGGGGATCGGAAAGACGATCGCTGACCGATCCCTTGCCGGTmioC
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif ADAGACGATCKYT

StartP-valueSite
4372.87e-08GGGGGATCGGAAAGACGATCGCTGACCGATCCC
2072.59e-07TCAACTTATTAGAGACGATCGTTAGCTGTTAAC
1562.96e-07TTCTATTAGGATCGACGATCTCTGTGGATAAGC
1064.59e-07CGTGTATTAAAAAGAAGATCTTTTTTATTTAGA

Motif AVCCGGT

StartP-valueSite
3303.35e-05ACCGGTTTTCACCCGGTAGTTAGCCAT
4015.61e-05TATTTACAAAACCCGGCGTGGGAAACG
3191.56e-04TTGGGATAATAACCGGTTTTCACCCGG
1761.56e-04TCTGTGGATAAGCCGGTTTTACTGATA

Motif GSCATGTTATSCACAG

StartP-valueSite
3421.28e-10CCGGTAGTTAGCCATGTTATCCACAGAAAAAGGCGT
2687.86e-10GGATCTAAATGGCATGTTATGCACAGGCTCAGGGAG
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI96000391 100.0 467 0 0 1 467 1 467 0.0 863
ORI93020116 90.889 461 38 4 1 460 1 458 0.0 616
ORI93020115 90.889 461 38 4 1 460 1 458 0.0 616
ORI92520062 88.286 461 45 9 1 458 1 455 0.0 544
ORI94030311 82.692 364 47 14 1 356 1 356 0.0 309
ORI92220054 79.487 312 54 10 50 356 332 26 0.0 213
ORI80020043 79.522 293 43 15 1 285 1 284 0.0 193
ORI10020019 77.551 343 55 20 1 333 1 331 0.0 187
ORI96000376 77.259 343 56 20 1 333 380 50 0.0 182
ORI96000375 77.259 343 56 20 1 333 1 331 0.0 182
ORI96000374 77.259 343 56 20 1 333 1 331 0.0 182
ORI93020117 77.259 343 56 20 1 333 1 331 0.0 182
ORI92520061 77.126 341 60 16 1 333 380 50 0.0 182
ORI92020050 77.259 343 56 20 1 333 1 331 0.0 182
ORI90020045 77.259 343 56 20 1 333 380 50 0.0 182
ORI20020031 77.259 343 56 20 1 333 1 331 0.0 182
ORI20020030 77.259 343 56 20 1 333 1 331 0.0 182
ORI92320057 76.968 343 57 20 1 333 380 50 4.2039e-45 176
ORI92220056 76.676 343 58 20 1 333 1 331 1.96182e-43 171
ORI10020008 76.316 342 62 17 1 333 1 332 9.10003e-42 165
ORI96020516 78.8 250 40 13 89 333 21 262 5.48e-39 156
ORI10020018 78.8 250 40 13 89 333 9 250 5.48e-39 156
ORI10030027 78.8 250 40 13 89 333 9 250 5.48e-39 156
ORI96000387 79.556 225 34 10 110 328 270 52 2.55e-37 150
ORI93020109 79.556 225 34 10 110 328 270 52 2.55e-37 150
ORI93020091 79.775 178 30 5 110 284 270 96 1.54e-29 124