RefSeq | NC_014306.1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Accession number | NC_014306.1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Lineage | bacteria, proteobacteria, gammaproteobacteria, enterobacteriales, enterobacteriaceae, erwinia. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
DoriC accession number | ORI94030311 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC length | 461 nt | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC AT content | 0.563991 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
The location of oriC region | 1..461 nt | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Browse in NCBI | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC map |
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OriC sequences |
gidAGGAACTGCACCTCGCGATTGTGCGATTTAGGGAGATTGGTTATCAGGGCGTGGATTCTACGCAACTTTGGGCGATGGGGAAAGCGCACTACCCGGTGTGTATTAAAAAGAAGATCTTTTTTATCTAGAGATCTCTTTGTTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCTTTTTTCCTGATAACGATCATCATCTTATTAAGGATCGTTAGCTGTGAAAGATCGGTGATCCTACGGCGTATAAGCTGGGATCTAAATGGCACCTTATCCACAAGCTCCGGCAAGTACTCAAGTTGTTCTTGGGATAACAACCGGTTATTACCGGGTTTTAAGCATAGTTATACACAAACGATCGCCACTTAAATGAACAAAAAAGGACATTATTTACAAAACCTGTCCGTTTTTTTTCGATCCGGCAGCCAAAATCAGGGCGATCCTGCTGCCAGCGATCCmioC
gidAGGAACTGCACCTCGCGATTGTGCGATTTAGGGAGATTGGTTATCAGGGCGTGGATTCTACGCAACTTTGGGCGATGGGGAAAGCGCACTACCCGGTGTGTATTAAAAAGAAGATCTTTTTTATCTAGAGATCTCTTTGTTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCTTTTTTCCTGATAACGATCATCATCTTATTAAGGATCGTTAGCTGTGAAAGATCGGTGATCCTACGGCGTATAAGCTGGGATCTAAATGGCACCTTATCCACAAGCTCCGGCAAGTACTCAAGTTGTTCTTGGGATAACAACCGGTTATTACCGGGTTTTAAGCATAGTTATACACAAACGATCGCCACTTAAATGAACAAAAAAGGACATTATTTACAAAACCTGTCCGTTTTTTTTCGATCCGGCAGCCAAAATCAGGGCGATCCTGCTGCCAGCGATCCmioC
gidAGGAACTGCACCTCGCGATTGTGCGATTTAGGGAGATTGGTTATCAGGGCGTGGATTCTACGCAACTTTGGGCGATGGGGAAAGCGCACTACCCGGTGTGTATTAAAAAGAAGATCTTTTTTATCTAGAGATCTCTTTGTTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCTTTTTTCCTGATAACGATCATCATCTTATTAAGGATCGTTAGCTGTGAAAGATCGGTGATCCTACGGCGTATAAGCTGGGATCTAAATGGCACCTTATCCACAAGCTCCGGCAAGTACTCAAGTTGTTCTTGGGATAACAACCGGTTATTACCGGGTTTTAAGCATAGTTATACACAAACGATCGCCACTTAAATGAACAAAAAAGGACATTATTTACAAAACCTGTCCGTTTTTTTTCGATCCGGCAGCCAAAATCAGGGCGATCCTGCTGCCAGCGATCCmioC
gidAGGAACTGCACCTCGCGATTGTGCGATTTAGGGAGATTGGTTATCAGGGCGTGGATTCTACGCAACTTTGGGCGATGGGGAAAGCGCACTACCCGGTGTGTATTAAAAAGAAGATCTTTTTTATCTAGAGATCTCTTTGTTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCTTTTTTCCTGATAACGATCATCATCTTATTAAGGATCGTTAGCTGTGAAAGATCGGTGATCCTACGGCGTATAAGCTGGGATCTAAATGGCACCTTATCCACAAGCTCCGGCAAGTACTCAAGTTGTTCTTGGGATAACAACCGGTTATTACCGGGTTTTAAGCATAGTTATACACAAACGATCGCCACTTAAATGAACAAAAAAGGACATTATTTACAAAACCTGTCCGTTTTTTTTCGATCCGGCAGCCAAAATCAGGGCGATCCTGCTGCCAGCGATCCmioC
gidAGGAACTGCACCTCGCGATTGTGCGATTTAGGGAGATTGGTTATCAGGGCGTGGATTCTACGCAACTTTGGGCGATGGGGAAAGCGCACTACCCGGTGTGTATTAAAAAGAAGATCTTTTTTATCTAGAGATCTCTTTGTTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCTTTTTTCCTGATAACGATCATCATCTTATTAAGGATCGTTAGCTGTGAAAGATCGGTGATCCTACGGCGTATAAGCTGGGATCTAAATGGCACCTTATCCACAAGCTCCGGCAAGTACTCAAGTTGTTCTTGGGATAACAACCGGTTATTACCGGGTTTTAAGCATAGTTATACACAAACGATCGCCACTTAAATGAACAAAAAAGGACATTATTTACAAAACCTGTCCGTTTTTTTTCGATCCGGCAGCCAAAATCAGGGCGATCCTGCTGCCAGCGATCCmioC
gidAGGAACTGCACCTCGCGATTGTGCGATTTAGGGAGATTGGTTATCAGGGCGTGGATTCTACGCAACTTTGGGCGATGGGGAAAGCGCACTACCCGGTGTGTATTAAAAAGAAGATCTTTTTTATCTAGAGATCTCTTTGTTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCTTTTTTCCTGATAACGATCATCATCTTATTAAGGATCGTTAGCTGTGAAAGATCGGTGATCCTACGGCGTATAAGCTGGGATCTAAATGGCACCTTATCCACAAGCTCCGGCAAGTACTCAAGTTGTTCTTGGGATAACAACCGGTTATTACCGGGTTTTAAGCATAGTTATACACAAACGATCGCCACTTAAATGAACAAAAAAGGACATTATTTACAAAACCTGTCCGTTTTTTTTCGATCCGGCAGCCAAAATCAGGGCGATCCTGCTGCCAGCGATCCmioC
gidaGGAACTGCACCTCGCGATTGTGCGATTTAGGGAGATTGGTTATCAGGGCGTGGATTCTACGCAACTTTGGGCGATGGGGAAAGCGCACTACCCGGTGTGTATTAAAAAGAAGATCTTTTTTATCTAGAGATCTCTTTGTTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCTTTTTTCCTGATAACGATCATCATCTTATTAAGGATCGTTAGCTGTGAAAGATCGGTGATCCTACGGCGTATAAGCTGGGATCTAAATGGCACCTTATCCACAAGCTCCGGCAAGTACTCAAGTTGTTCTTGGGATAACAACCGGTTATTACCGGGTTTTAAGCATAGTTATACACAAACGATCGCCACTTAAATGAACAAAAAAGGACATTATTTACAAAACCTGTCCGTTTTTTTTCGATCCGGCAGCCAAAATCAGGGCGATCCTGCTGCCAGCGATCCmioc
gidAGGAACTGCACCTCGCGATTGTGCGATTTAGGGAGATTGGTTATCAGGGCGTGGATTCTACGCAACTTTGGGCGATGGGGAAAGCGCACTACCCGGTGTGTATTAAAAAGAAGATCTTTTTTATCTAGAGATCTCTTTGTTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCTTTTTTCCTGATAACGATCATCATCTTATTAAGGATCGTTAGCTGTGAAAGATCGGTGATCCTACGGCGTATAAGCTGGGATCTAAATGGCACCTTATCCACAAGCTCCGGCAAGTACTCAAGTTGTTCTTGGGATAACAACCGGTTATTACCGGGTTTTAAGCATAGTTATACACAAACGATCGCCACTTAAATGAACAAAAAAGGACATTATTTACAAAACCTGTCCGTTTTTTTTCGATCCGGCAGCCAAAATCAGGGCGATCCTGCTGCCAGCGATCCmioC
gidAGGAACTGCACCTCGCGATTGTGCGATTTAGGGAGATTGGTTATCAGGGCGTGGATTCTACGCAACTTTGGGCGATGGGGAAAGCGCACTACCCGGTGTGTATTAAAAAGAAGATCTTTTTTATCTAGAGATCTCTTTGTTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCTTTTTTCCTGATAACGATCATCATCTTATTAAGGATCGTTAGCTGTGAAAGATCGGTGATCCTACGGCGTATAAGCTGGGATCTAAATGGCACCTTATCCACAAGCTCCGGCAAGTACTCAAGTTGTTCTTGGGATAACAACCGGTTATTACCGGGTTTTAAGCATAGTTATACACAAACGATCGCCACTTAAATGAACAAAAAAGGACATTATTTACAAAACCTGTCCGTTTTTTTTCGATCCGGCAGCCAAAATCAGGGCGATCCTGCTGCCAGCGATCCmioC
gidAGGAACTGCACCTCGCGATTGTGCGATTTAGGGAGATTGGTTATCAGGGCGTGGATTCTACGCAACTTTGGGCGATGGGGAAAGCGCACTACCCGGTGTGTATTAAAAAGAAGATCTTTTTTATCTAGAGATCTCTTTGTTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCTTTTTTCCTGATAACGATCATCATCTTATTAAGGATCGTTAGCTGTGAAAGATCGGTGATCCTACGGCGTATAAGCTGGGATCTAAATGGCACCTTATCCACAAGCTCCGGCAAGTACTCAAGTTGTTCTTGGGATAACAACCGGTTATTACCGGGTTTTAAGCATAGTTATACACAAACGATCGCCACTTAAATGAACAAAAAAGGACATTATTTACAAAACCTGTCCGTTTTTTTTCGATCCGGCAGCCAAAATCAGGGCGATCCTGCTGCCAGCGATCCmioC
5'-DnaA box-3'
3'-DnaA box-5'
Spacer
DnaA-trio
ATP-DnaA box
AT-rich region GATC CtrA binding motif Fis binding site IHF binding site |
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The information of repeat sequences |
Motif TAAGSMTHKTTWBCTGHNAACGATC
Motif CCGGCA
Motif GCACCT
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Distribution of genes on leading or lagging strand |
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Distribution of nucleotide on leading or lagging strand |
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The result of BLAST |
Download
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