RefSeq NC_014306.1
Accession number NC_014306.1
DoriC accession number ORI94030311
OriC length 461 nt
OriC AT content 0.563991
The location of oriC region 1..461 nt
Browse in NCBI
OriC map
OriC sequences
gidAGGAACTGCACCTCGCGATTGTGCGATTTAGGGAGATTGGTTATCAGGGCGTGGATTCTACGCAACTTTGGGCGATGGGGAAAGCGCACTACCCGGTGTGTATTAAAAAGAAGATCTTTTTTATCTAGAGATCTCTTTGTTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCTTTTTTCCTGATAACGATCATCATCTTATTAAGGATCGTTAGCTGTGAAAGATCGGTGATCCTACGGCGTATAAGCTGGGATCTAAATGGCACCTTATCCACAAGCTCCGGCAAGTACTCAAGTTGTTCTTGGGATAACAACCGGTTATTACCGGGTTTTAAGCATAGTTATACACAAACGATCGCCACTTAAATGAACAAAAAAGGACATTATTTACAAAACCTGTCCGTTTTTTTTCGATCCGGCAGCCAAAATCAGGGCGATCCTGCTGCCAGCGATCCmioC
gidAGGAACTGCACCTCGCGATTGTGCGATTTAGGGAGATTGGTTATCAGGGCGTGGATTCTACGCAACTTTGGGCGATGGGGAAAGCGCACTACCCGGTGTGTATTAAAAAGAAGATCTTTTTTATCTAGAGATCTCTTTGTTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCTTTTTTCCTGATAACGATCATCATCTTATTAAGGATCGTTAGCTGTGAAAGATCGGTGATCCTACGGCGTATAAGCTGGGATCTAAATGGCACCTTATCCACAAGCTCCGGCAAGTACTCAAGTTGTTCTTGGGATAACAACCGGTTATTACCGGGTTTTAAGCATAGTTATACACAAACGATCGCCACTTAAATGAACAAAAAAGGACATTATTTACAAAACCTGTCCGTTTTTTTTCGATCCGGCAGCCAAAATCAGGGCGATCCTGCTGCCAGCGATCCmioC
gidAGGAACTGCACCTCGCGATTGTGCGATTTAGGGAGATTGGTTATCAGGGCGTGGATTCTACGCAACTTTGGGCGATGGGGAAAGCGCACTACCCGGTGTGTATTAAAAAGAAGATCTTTTTTATCTAGAGATCTCTTTGTTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCTTTTTTCCTGATAACGATCATCATCTTATTAAGGATCGTTAGCTGTGAAAGATCGGTGATCCTACGGCGTATAAGCTGGGATCTAAATGGCACCTTATCCACAAGCTCCGGCAAGTACTCAAGTTGTTCTTGGGATAACAACCGGTTATTACCGGGTTTTAAGCATAGTTATACACAAACGATCGCCACTTAAATGAACAAAAAAGGACATTATTTACAAAACCTGTCCGTTTTTTTTCGATCCGGCAGCCAAAATCAGGGCGATCCTGCTGCCAGCGATCCmioC
gidAGGAACTGCACCTCGCGATTGTGCGATTTAGGGAGATTGGTTATCAGGGCGTGGATTCTACGCAACTTTGGGCGATGGGGAAAGCGCACTACCCGGTGTGTATTAAAAAGAAGATCTTTTTTATCTAGAGATCTCTTTGTTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCTTTTTTCCTGATAACGATCATCATCTTATTAAGGATCGTTAGCTGTGAAAGATCGGTGATCCTACGGCGTATAAGCTGGGATCTAAATGGCACCTTATCCACAAGCTCCGGCAAGTACTCAAGTTGTTCTTGGGATAACAACCGGTTATTACCGGGTTTTAAGCATAGTTATACACAAACGATCGCCACTTAAATGAACAAAAAAGGACATTATTTACAAAACCTGTCCGTTTTTTTTCGATCCGGCAGCCAAAATCAGGGCGATCCTGCTGCCAGCGATCCmioC
gidAGGAACTGCACCTCGCGATTGTGCGATTTAGGGAGATTGGTTATCAGGGCGTGGATTCTACGCAACTTTGGGCGATGGGGAAAGCGCACTACCCGGTGTGTATTAAAAAGAAGATCTTTTTTATCTAGAGATCTCTTTGTTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCTTTTTTCCTGATAACGATCATCATCTTATTAAGGATCGTTAGCTGTGAAAGATCGGTGATCCTACGGCGTATAAGCTGGGATCTAAATGGCACCTTATCCACAAGCTCCGGCAAGTACTCAAGTTGTTCTTGGGATAACAACCGGTTATTACCGGGTTTTAAGCATAGTTATACACAAACGATCGCCACTTAAATGAACAAAAAAGGACATTATTTACAAAACCTGTCCGTTTTTTTTCGATCCGGCAGCCAAAATCAGGGCGATCCTGCTGCCAGCGATCCmioC
gidAGGAACTGCACCTCGCGATTGTGCGATTTAGGGAGATTGGTTATCAGGGCGTGGATTCTACGCAACTTTGGGCGATGGGGAAAGCGCACTACCCGGTGTGTATTAAAAAGAAGATCTTTTTTATCTAGAGATCTCTTTGTTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCTTTTTTCCTGATAACGATCATCATCTTATTAAGGATCGTTAGCTGTGAAAGATCGGTGATCCTACGGCGTATAAGCTGGGATCTAAATGGCACCTTATCCACAAGCTCCGGCAAGTACTCAAGTTGTTCTTGGGATAACAACCGGTTATTACCGGGTTTTAAGCATAGTTATACACAAACGATCGCCACTTAAATGAACAAAAAAGGACATTATTTACAAAACCTGTCCGTTTTTTTTCGATCCGGCAGCCAAAATCAGGGCGATCCTGCTGCCAGCGATCCmioC
gidAGGAACTGCACCTCGCGATTGTGCGATTTAGGGAGATTGGTTATCAGGGCGTGGATTCTACGCAACTTTGGGCGATGGGGAAAGCGCACTACCCGGTGTGTATTAAAAAGAAGATCTTTTTTATCTAGAGATCTCTTTGTTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCTTTTTTCCTGATAACGATCATCATCTTATTAAGGATCGTTAGCTGTGAAAGATCGGTGATCCTACGGCGTATAAGCTGGGATCTAAATGGCACCTTATCCACAAGCTCCGGCAAGTACTCAAGTTGTTCTTGGGATAACAACCGGTTATTACCGGGTTTTAAGCATAGTTATACACAAACGATCGCCACTTAAATGAACAAAAAAGGACATTATTTACAAAACCTGTCCGTTTTTTTTCGATCCGGCAGCCAAAATCAGGGCGATCCTGCTGCCAGCGATCCmioC
gidaGGAACTGCACCTCGCGATTGTGCGATTTAGGGAGATTGGTTATCAGGGCGTGGATTCTACGCAACTTTGGGCGATGGGGAAAGCGCACTACCCGGTGTGTATTAAAAAGAAGATCTTTTTTATCTAGAGATCTCTTTGTTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCTTTTTTCCTGATAACGATCATCATCTTATTAAGGATCGTTAGCTGTGAAAGATCGGTGATCCTACGGCGTATAAGCTGGGATCTAAATGGCACCTTATCCACAAGCTCCGGCAAGTACTCAAGTTGTTCTTGGGATAACAACCGGTTATTACCGGGTTTTAAGCATAGTTATACACAAACGATCGCCACTTAAATGAACAAAAAAGGACATTATTTACAAAACCTGTCCGTTTTTTTTCGATCCGGCAGCCAAAATCAGGGCGATCCTGCTGCCAGCGATCCmioc
gidAGGAACTGCACCTCGCGATTGTGCGATTTAGGGAGATTGGTTATCAGGGCGTGGATTCTACGCAACTTTGGGCGATGGGGAAAGCGCACTACCCGGTGTGTATTAAAAAGAAGATCTTTTTTATCTAGAGATCTCTTTGTTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCTTTTTTCCTGATAACGATCATCATCTTATTAAGGATCGTTAGCTGTGAAAGATCGGTGATCCTACGGCGTATAAGCTGGGATCTAAATGGCACCTTATCCACAAGCTCCGGCAAGTACTCAAGTTGTTCTTGGGATAACAACCGGTTATTACCGGGTTTTAAGCATAGTTATACACAAACGATCGCCACTTAAATGAACAAAAAAGGACATTATTTACAAAACCTGTCCGTTTTTTTTCGATCCGGCAGCCAAAATCAGGGCGATCCTGCTGCCAGCGATCCmioC
gidAGGAACTGCACCTCGCGATTGTGCGATTTAGGGAGATTGGTTATCAGGGCGTGGATTCTACGCAACTTTGGGCGATGGGGAAAGCGCACTACCCGGTGTGTATTAAAAAGAAGATCTTTTTTATCTAGAGATCTCTTTGTTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCTTTTTTCCTGATAACGATCATCATCTTATTAAGGATCGTTAGCTGTGAAAGATCGGTGATCCTACGGCGTATAAGCTGGGATCTAAATGGCACCTTATCCACAAGCTCCGGCAAGTACTCAAGTTGTTCTTGGGATAACAACCGGTTATTACCGGGTTTTAAGCATAGTTATACACAAACGATCGCCACTTAAATGAACAAAAAAGGACATTATTTACAAAACCTGTCCGTTTTTTTTCGATCCGGCAGCCAAAATCAGGGCGATCCTGCTGCCAGCGATCCmioC
gidAGGAACTGCACCTCGCGATTGTGCGATTTAGGGAGATTGGTTATCAGGGCGTGGATTCTACGCAACTTTGGGCGATGGGGAAAGCGCACTACCCGGTGTGTATTAAAAAGAAGATCTTTTTTATCTAGAGATCTCTTTGTTAGATCTTCTATTAGGATCGACGATCTCTGTGGATAAGCCTTTTTTCCTGATAACGATCATCATCTTATTAAGGATCGTTAGCTGTGAAAGATCGGTGATCCTACGGCGTATAAGCTGGGATCTAAATGGCACCTTATCCACAAGCTCCGGCAAGTACTCAAGTTGTTCTTGGGATAACAACCGGTTATTACCGGGTTTTAAGCATAGTTATACACAAACGATCGCCACTTAAATGAACAAAAAAGGACATTATTTACAAAACCTGTCCGTTTTTTTTCGATCCGGCAGCCAAAATCAGGGCGATCCTGCTGCCAGCGATCCmioC
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif TAAGSMTHKTTWBCTGHNAACGATC

StartP-valueSite
1741.78e-11TCTCTGTGGATAAGCCTTTTTTCCTGATAACGATCATCATCTTAT
2092.51e-11ATCATCTTATTAAGGATCGTTAGCTGTGAAAGATCGGTGATCCTA
3391.88e-10TACCGGGTTTTAAGCATAGTTATACACAAACGATCGCCACTTAAA
4363.16e-10CAGCCAAAATCAGGGCGATCCTGCTGCCAGCGATCC

Motif CCGGCA

StartP-valueSite
4221.29e-04TTTTTTCGATCCGGCAGCCAAAATCA
2871.29e-04TCCACAAGCTCCGGCAAGTACTCAAG

Motif GCACCT

StartP-valueSite
2691.65e-04GATCTAAATGGCACCTTATCCACAAG
71.65e-04GGAACTGCACCTCGCGATTGTG
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI94030311 100.0 461 0 0 1 461 1 461 0.0 852
ORI93020116 82.967 364 45 14 1 356 1 355 0.0 313
ORI93020115 82.967 364 45 14 1 356 1 355 0.0 313
ORI96000391 82.692 364 47 14 1 356 1 356 0.0 309
ORI92520062 81.944 360 56 9 1 356 1 355 0.0 296