RefSeq NZ_CP021969
DoriC accession number pORI00000982
OriC length 501 nt
OriC AT content 0.7086
The location of oriC region 10460..10960 nt
Browse in NCBI
OriC map
OriC sequences
ATAAATACGCTCCTTTAGGCGTGTTGTTGGATAAGCATAAAGAAAAACTTTTAGTCGGGAATTTCTTTATGCTTTTATTATAACATTATATAGCGACAAAATATTTTAAACAGTCGCTATATACATAGTTTTTTGTCGCTATATACATAGTTTTTTGTCGCTATATACATAGTTTTTTGTCGCTATATTACCTATTAAACCCTTGATATTACTGAATTTCTAACTACGCAAAAGAACAAAAGATTAAAATATAAAAGATAAACTTATAATAGGCTCCGCCTTTTTATTGATTCAATAAAAAACAAAACAAAAAGAACACTGGTGCACATAAATTTCGTACAGAGTGTTCTTTTTGTTTTGAATCATTTCAAATGCTGGATACCTAGTTATCTATCATAATTGCCACTTATTAAGCCAATAGCGACGTTTTAAGTTACTTAATGATTATTTCTACGTATTTCATCTAAAAACGCTTAGACGGGCAAATAAGCCGTTATAACG
ATAAATACGCTCCTTTAGGCGTGTTGTTGGATAAGCATAAAGAAAAACTTTTAGTCGGGAATTTCTTTATGCTTTTATTATAACATTATATAGCGACAAAATATTTTAAACAGTCGCTATATACATAGTTTTTTGTCGCTATATACATAGTTTTTTGTCGCTATATACATAGTTTTTTGTCGCTATATTACCTATTAAACCCTTGATATTACTGAATTTCTAACTACGCAAAAGAACAAAAGATTAAAATATAAAAGATAAACTTATAATAGGCTCCGCCTTTTTATTGATTCAATAAAAAACAAAACAAAAAGAACACTGGTGCACATAAATTTCGTACAGAGTGTTCTTTTTGTTTTGAATCATTTCAAATGCTGGATACCTAGTTATCTATCATAATTGCCACTTATTAAGCCAATAGCGACGTTTTAAGTTACTTAATGATTATTTCTACGTATTTCATCTAAAAACGCTTAGACGGGCAAATAAGCCGTTATAACG
AT-rich region
The information of repeat sequences

Motif GTCGCTATATACMTAGTT

StartP-valueSite
1575.51e-11ATAGTTTTTTGTCGCTATATACATAGTTTTTTGTCGCT
1355.51e-11ATAGTTTTTTGTCGCTATATACATAGTTTTTTGTCGCT
1135.51e-11ATTTTAAACAGTCGCTATATACATAGTTTTTTGTCGCT
3713.12e-08AATCATTTCAAATGCTGGATACCTAGTTATCTATCATA
1795.08e-08ATAGTTTTTTGTCGCTATATTACCTATTAAACCCTTGA

Motif CBTTTAGDCGKG

StartP-valueSite
4711.08e-08CATCTAAAAACGCTTAGACGGGCAAATAAGCC
129.42e-08TAAATACGCTCCTTTAGGCGTGTTGTTGGATA
481.29e-07TAAAGAAAAACTTTTAGTCGGGAATTTCTTTA

Motif AGCGAC

StartP-valueSite
4205.56e-05TTAAGCCAATAGCGACGTTTTAAGTT
925.56e-05AACATTATATAGCGACAAAATATTTT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000982 100.0 501 0 0 1 501 1 501 0.0 926
pORI00000506 89.505 505 46 7 1 501 502 1 0.0 632
pORI00000843 84.149 511 62 11 1 501 502 1 0.0 477
pORI00000425 83.858 508 67 14 1 501 500 1 0.0 470
pORI00000787 81.349 504 84 9 1 501 497 1 0.0 401
pORI00000786 81.349 504 84 9 1 501 497 1 0.0 401
pORI00000511 81.349 504 84 9 1 501 497 1 0.0 401
pORI00000260 81.452 496 71 17 1 490 492 12 0.0 387
pORI00000482 77.821 514 84 24 1 501 497 1 0.0 291
pORI00000208 75.646 271 37 27 35 292 1449 1195 1.3e-24 108
pORI00000349 75.847 236 41 12 62 292 1392 1168 4.67e-24 106
pORI00000848 75.465 269 35 22 32 285 32 284 6.04e-23 102
pORI00000847 74.088 274 44 24 41 299 545 284 1.69e-18 88
pORI00000507 90.625 64 4 2 226 288 1182 1120 2.19e-17 84
pORI00000397 76.608 171 29 11 120 285 120 284 2.19e-17 84
pORI00000378 89.552 67 4 3 226 292 1249 1186 7.86e-17 82
pORI00000849 75.429 175 38 5 119 292 620 450 2.83e-16 81
pORI00000532 75.429 175 38 5 119 292 822 652 2.83e-16 81
pORI00000408 75.429 175 38 5 119 292 620 450 2.83e-16 81
pORI00000797 90.0 60 6 0 226 285 223 282 1.02e-15 79
pORI00000790 88.06 67 6 2 226 292 1300 1236 1.02e-15 79