RefSeq NZ_CP016601
DoriC accession number pORI00000843
OriC length 502 nt
OriC AT content 0.6972
The location of oriC region 5217..5718 nt
Browse in NCBI
OriC map
OriC sequences
CGTTAAAACGGCTTATTTGCCCGTCTAAGCGTTTTTAGCTACGAAACGTAGAAATAATCATCAAATAGATTAAAACGTCTCTATCGGCTTAATAAGTGGCAATCATATTAGATAACAAGTGATATTTCATTTAAATTCATTCAAAAAAGAACCCCACGTACAAAATTGACGTACTATGGGGTTCTTTTTGTTTTGTTTTGTTTTTTATTGAATCAATAAAAAGGCGAAGCCTATTATAAGTTTATCTTTTATATTTTAATCTTTTGTTCTTTTGCGCGGTTAGAAACACAGTAATACCAATGGTTTTACGTATTATATAGCTACCAAAAACTGTGTATATAGCTACCAAAAACTGTGTATATAGCTACCAAAAACTGTGTATATAGCTACGTTTCATATTTTTTTGTAGCTATATACTGGTATAATAAAAGCATAAAGAAATTCCTGTCTAAAAGTTTTTCTTTATGCTTATCCAACAACACGCCCAAAGGAGCGAATTTAT
CGTTAAAACGGCTTATTTGCCCGTCTAAGCGTTTTTAGCTACGAAACGTAGAAATAATCATCAAATAGATTAAAACGTCTCTATCGGCTTAATAAGTGGCAATCATATTAGATAACAAGTGATATTTCATTTAAATTCATTCAAAAAAGAACCCCACGTACAAAATTGACGTACTATGGGGTTCTTTTTGTTTTGTTTTGTTTTTTATTGAATCAATAAAAAGGCGAAGCCTATTATAAGTTTATCTTTTATATTTTAATCTTTTGTTCTTTTGCGCGGTTAGAAACACAGTAATACCAATGGTTTTACGTATTATATAGCTACCAAAAACTGTGTATATAGCTACCAAAAACTGTGTATATAGCTACCAAAAACTGTGTATATAGCTACGTTTCATATTTTTTTGTAGCTATATACTGGTATAATAAAAGCATAAAGAAATTCCTGTCTAAAAGTTTTTCTTTATGCTTATCCAACAACACGCCCAAAGGAGCGAATTTAT
AT-rich region
The information of repeat sequences

Motif GTATATAGCTACSAAAMAYWG

StartP-valueSite
3571.54e-12CAAAAACTGTGTATATAGCTACCAAAAACTGTGTATATAGC
3351.54e-12CAAAAACTGTGTATATAGCTACCAAAAACTGTGTATATAGC
3135.01e-11GTTTTACGTATTATATAGCTACCAAAAACTGTGTATATAGC
316.70e-10CCGTCTAAGCGTTTTTAGCTACGAAACGTAGAAATAATCAT
3793.84e-09CAAAAACTGTGTATATAGCTACGTTTCATATTTTTTTGTAG

Motif CAAHAAAAARSCSAAVS

StartP-valueSite
4741.51e-09TATGCTTATCCAACAACACGCCCAAAGGAGCGAATTT
1421.25e-08TAAATTCATTCAAAAAAGAACCCCACGTACAAAATTG
2141.57e-08TTTATTGAATCAATAAAAAGGCGAAGCCTATTATAAG

Motif TGCSCG

StartP-valueSite
2732.78e-05TTTGTTCTTTTGCGCGGTTAGAAACA
185.79e-05ACGGCTTATTTGCCCGTCTAAGCGTT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000843 100.0 502 0 0 1 502 1 502 0.0 928
pORI00000843 100.0 33 0 0 358 390 314 346 1.03e-10 62
pORI00000843 100.0 33 0 0 314 346 358 390 1.03e-10 62
pORI00000982 84.149 511 62 11 1 502 501 1 0.0 477
pORI00000787 82.574 505 77 8 1 502 1 497 0.0 435
pORI00000786 82.574 505 77 8 1 502 1 497 0.0 435
pORI00000511 82.574 505 77 8 1 502 1 497 0.0 435
pORI00000482 81.729 509 74 15 1 502 1 497 0.0 407
pORI00000506 81.336 509 81 9 1 502 1 502 0.0 401
pORI00000425 79.142 513 83 16 1 502 1 500 0.0 333
pORI00000260 78.15 508 89 14 1 502 1 492 0.0 303