RefSeq NZ_CP016736
DoriC accession number pORI00000848
OriC length 1626 nt
OriC AT content 0.6894
The location of oriC region 7371..8996 nt
Browse in NCBI
OriC map
OriC sequences
AGTAAGTTGCTCCTTTGTGAGTGATTTTAAGTAGGCATAGAGAAAGTCATTTAGCGGTGAATTTTCTCTATGCTTTTATTATAACATATATGTGGACTTTGTACAGTTCTTTGACCACGTATACACAGTTTTTTGCCCACGTATACACAGTTTTTTGCCCACGTATACACAGTTTTTTGCCCACATTAAATTCTGTGAAACCCTATAAACACTGAATTTTTTAGCACGCAAAAGAACAAAAGATTAAAATATATAAGATAAATGTAAATAGGCTTCGCCTTTTTTTATTTTTCTTTAAATTAAAAATATTTTAAAGAAAAAAGGTTAAAATATCTCCAAAGTCCATATTTTTCGTTTTAGGATCTTTAAAAAAAGAGAACTTTTTAGTCCTCTTTTTCACCTTACTTTAGTTTACTACTTAGTATAACAAGTGACACAAGCTACACCCTTTCTATCACTAGGATAGTTAAAGTTGTATCATTTGTACACCCCCTCATTAGCTTTTCGGGGTGTTCGTGCATTCCCAACGCTCACTCCTTACGCTTTGCTCGGAGCTATGCTTACGGTCATGCACGAAAATAACTGTTATTATAATAGTTATATTATAGCGTTTTTTATAATCCTTTACAAGCTCTTAAATCGACATCTAAGACACTTTAGAGATTCTTCGTATAAATGATCAAAAACAAATAAAAAAGTCCTTAAAATAGAAAATAAGGGCCATTTTAGTAGTATTTTTTTGTTATTAGATAAAAACCGTATGATATAATGAATATTGGCGTTAAAGCCTATCCTAAAAAAGGAAAGGAGGTAGCACCATGAATCAATTCATACAGTTTGTTTCTGCTCTTGCTGTCAGTATACTGACAGAGTCTTTTAAAGCTTGGCTTAGCGATAAAAGGTCTAGTAAGAAACACAAAAAACGCCATTAAGCTTTTATACCAGGTACGGCAATACCTGGTATTTTTTTATAAAAAAATAGAGCCCGGCAAGGCTCTATTTCTGGTAGCACTATGATGCGCAAACCAATTCATACGTTAAGTAAAATTTATCACATCTTCTTTTTTTTGTCAAACTTATGCACTTGAACAACGTTATATTTCAAAGAGAAGGTGCTTACAACCATTTTTAAACAGATATTATGATAACTAATCATATTACCGTCGCCAAAAACTTACTTAAAATAAAAAGATAGGAATGTGATAAACCTGTCTTTTTATTAGCAGGACGATATACTGTACATCCAAACTTCGTTATACCATTTTATTATCTTAAAACCAAATACGTTTGTCAATAATTTATATCAGATTCACAAGATGATTTGATAGTTATGATAATGTTCTCATAACTATCAAAACGTTTCTCATTTTATTTTCCTATTTTTTATCCAAGAGCATAAGGGAAAGTGTCCCCAAAAGTTGGTTAAAGCCGCAGTACGACTTGTTTTAGCGAGGAATCAGATTTTTCTCATTTATAGTGTTTGTAAAGTGTTTCAAATCGCTCAACCACAGCTTTATATAAAATAGAGAAATTAGAAAAATCTCATAATATAGTCTTTTTAAAGGATTGTACAGTGCTTAAAAAGACTCAATAATCAAGCTTATACTTTGCTTTCATAATATTTTT
AGTAAGTTGCTCCTTTGTGAGTGATTTTAAGTAGGCATAGAGAAAGTCATTTAGCGGTGAATTTTCTCTATGCTTTTATTATAACATATATGTGGACTTTGTACAGTTCTTTGACCACGTATACACAGTTTTTTGCCCACGTATACACAGTTTTTTGCCCACGTATACACAGTTTTTTGCCCACATTAAATTCTGTGAAACCCTATAAACACTGAATTTTTTAGCACGCAAAAGAACAAAAGATTAAAATATATAAGATAAATGTAAATAGGCTTCGCCTTTTTTTATTTTTCTTTAAATTAAAAATATTTTAAAGAAAAAAGGTTAAAATATCTCCAAAGTCCATATTTTTCGTTTTAGGATCTTTAAAAAAAGAGAACTTTTTAGTCCTCTTTTTCACCTTACTTTAGTTTACTACTTAGTATAACAAGTGACACAAGCTACACCCTTTCTATCACTAGGATAGTTAAAGTTGTATCATTTGTACACCCCCTCATTAGCTTTTCGGGGTGTTCGTGCATTCCCAACGCTCACTCCTTACGCTTTGCTCGGAGCTATGCTTACGGTCATGCACGAAAATAACTGTTATTATAATAGTTATATTATAGCGTTTTTTATAATCCTTTACAAGCTCTTAAATCGACATCTAAGACACTTTAGAGATTCTTCGTATAAATGATCAAAAACAAATAAAAAAGTCCTTAAAATAGAAAATAAGGGCCATTTTAGTAGTATTTTTTTGTTATTAGATAAAAACCGTATGATATAATGAATATTGGCGTTAAAGCCTATCCTAAAAAAGGAAAGGAGGTAGCACCATGAATCAATTCATACAGTTTGTTTCTGCTCTTGCTGTCAGTATACTGACAGAGTCTTTTAAAGCTTGGCTTAGCGATAAAAGGTCTAGTAAGAAACACAAAAAACGCCATTAAGCTTTTATACCAGGTACGGCAATACCTGGTATTTTTTTATAAAAAAATAGAGCCCGGCAAGGCTCTATTTCTGGTAGCACTATGATGCGCAAACCAATTCATACGTTAAGTAAAATTTATCACATCTTCTTTTTTTTGTCAAACTTATGCACTTGAACAACGTTATATTTCAAAGAGAAGGTGCTTACAACCATTTTTAAACAGATATTATGATAACTAATCATATTACCGTCGCCAAAAACTTACTTAAAATAAAAAGATAGGAATGTGATAAACCTGTCTTTTTATTAGCAGGACGATATACTGTACATCCAAACTTCGTTATACCATTTTATTATCTTAAAACCAAATACGTTTGTCAATAATTTATATCAGATTCACAAGATGATTTGATAGTTATGATAATGTTCTCATAACTATCAAAACGTTTCTCATTTTATTTTCCTATTTTTTATCCAAGAGCATAAGGGAAAGTGTCCCCAAAAGTTGGTTAAAGCCGCAGTACGACTTGTTTTAGCGAGGAATCAGATTTTTCTCATTTATAGTGTTTGTAAAGTGTTTCAAATCGCTCAACCACAGCTTTATATAAAATAGAGAAATTAGAAAAATCTCATAATATAGTCTTTTTAAAGGATTGTACAGTGCTTAAAAAGACTCAATAATCAAGCTTATACTTTGCTTTCATAATATTTTT
AT-rich region
The information of repeat sequences

Motif TRCACAGTTYTTTGCCCACGT

StartP-valueSite
1445.27e-13TGCCCACGTATACACAGTTTTTTGCCCACGTATACACAGTT
1225.27e-13TGACCACGTATACACAGTTTTTTGCCCACGTATACACAGTT
1661.05e-11TGCCCACGTATACACAGTTTTTTGCCCACATTAAATTCTGT
1002.97e-11ATGTGGACTTTGTACAGTTCTTTGACCACGTATACACAGTT
5461.36e-09CCTTACGCTTTGCTCGGAGCTATGCTTACGGTCATGCACGA

Motif RGTAGCASTAYGA

StartP-valueSite
8105.77e-08AAGGAAAGGAGGTAGCACCATGAATCAATTCAT
10057.13e-08CTCTATTTCTGGTAGCACTATGATGCGCAAACC
14271.64e-07AGTTGGTTAAAGCCGCAGTACGACTTGTTTTAG
12193.26e-07CTGTCTTTTTATTAGCAGGACGATATACTGTAC

Motif CCMGGYAMGGC

StartP-valueSite
9851.59e-08AAAAATAGAGCCCGGCAAGGCTCTATTTCTG
9426.23e-08AGCTTTTATACCAGGTACGGCAATACCTGGT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000848 100.0 1626 0 0 1 1626 1 1626 0.0 3003
pORI00000508 89.528 869 63 22 120 974 1884 1030 0.0 1075
pORI00000797 80.645 310 37 22 10 307 8 306 0.0 219
pORI00000847 81.752 274 37 12 39 305 545 278 0.0 217
pORI00000378 78.247 308 47 20 1 299 1473 1177 1.4013e-45 180
pORI00000208 77.85 307 43 25 5 299 1479 1186 7.03031e-42 167
pORI00000790 78.361 305 31 25 10 307 1493 1217 2.53004e-41 165
pORI00000507 76.797 306 50 20 10 305 1397 1103 1.97e-37 152
pORI00000397 82.184 174 23 6 116 285 116 285 1.19e-34 143
pORI00000849 89.216 102 8 3 206 305 533 433 4.29e-29 124
pORI00000532 89.216 102 8 3 206 305 735 635 4.29e-29 124
pORI00000408 89.216 102 8 3 206 305 533 433 4.29e-29 124
pORI00000349 88.235 102 11 1 207 307 1250 1149 5.55e-28 121
pORI00000982 75.094 265 43 15 32 284 32 285 2.01e-22 102
pORI00000260 86.207 87 7 5 207 289 288 203 1.57e-18 90