RefSeq NZ_CP016735
DoriC accession number pORI00000847
OriC length 545 nt
OriC AT content 0.7046
The location of oriC region 48088..48632 nt
Browse in NCBI
OriC map
OriC sequences
TAAGCTGATATTAGCCCTCAGAAGGGCTTTTTCTTTTAACTATGATATTTATTACCAACTCACGTTTAAAATGTCTTAGAATGCAAAATATGAGTTTCTAGGACTATTTAAAGCTTTAGATCTAAACAAAGTAGTCACGACCGTTAGGGAGTTCTTTTTAGTGGCAGAATGAATCTAATATAAAATTAGAGTGTACAAGCGGAGCGACAAGAGCAACGTAGGGAGTTTAAATTTAGAACCTCAATTCAATGGTTTTGACTTTTTCTTTTGACCTTGATTTTAATTTTTGAAAAAATAAAAAAGGCGAAGCCTATTTATATTTATCATATATATTTTAATCTTTTGTTCTTTTGCGTGCAAAAAAAAATCAAGTGTTTGCAAGGGTTTACAGATTTAATGTGTACAAAAAACTGTTTACATGTGTACAAAAAACTGTTTACATGTGTACAAAAAACTGTTTACATGTGTACAAAAAAATAGTTAAAGTACACGTGTAGTGATATAATAAAAGCATAGAAGAAATTCACTCGCAAAAATGTTTCTCT
TAAGCTGATATTAGCCCTCAGAAGGGCTTTTTCTTTTAACTATGATATTTATTACCAACTCACGTTTAAAATGTCTTAGAATGCAAAATATGAGTTTCTAGGACTATTTAAAGCTTTAGATCTAAACAAAGTAGTCACGACCGTTAGGGAGTTCTTTTTAGTGGCAGAATGAATCTAATATAAAATTAGAGTGTACAAGCGGAGCGACAAGAGCAACGTAGGGAGTTTAAATTTAGAACCTCAATTCAATGGTTTTGACTTTTTCTTTTGACCTTGATTTTAATTTTTGAAAAAATAAAAAAGGCGAAGCCTATTTATATTTATCATATATATTTTAATCTTTTGTTCTTTTGCGTGCAAAAAAAAATCAAGTGTTTGCAAGGGTTTACAGATTTAATGTGTACAAAAAACTGTTTACATGTGTACAAAAAACTGTTTACATGTGTACAAAAAACTGTTTACATGTGTACAAAAAAATAGTTAAAGTACACGTGTAGTGATATAATAAAAGCATAGAAGAAATTCACTCGCAAAAATGTTTCTCT
AT-rich region
The information of repeat sequences

Motif CTGTTTWCATGTGTACAAAAA

StartP-valueSite
4551.62e-12GTACAAAAAACTGTTTACATGTGTACAAAAAAATAGTTAAA
4331.62e-12GTACAAAAAACTGTTTACATGTGTACAAAAAACTGTTTACA
4111.62e-12GTACAAAAAACTGTTTACATGTGTACAAAAAACTGTTTACA
3895.76e-10CAAGGGTTTACAGATTTAATGTGTACAAAAAACTGTTTACA
3431.26e-09TTTTAATCTTTTGTTCTTTTGCGTGCAAAAAAAAATCAAGT

Motif GCGRAGCS

StartP-valueSite
1991.40e-06GAGTGTACAAGCGGAGCGACAAGAGCAA
3042.74e-06AATAAAAAAGGCGAAGCCTATTTATATT

Motif CWAGHGYTWVGWAGGGHTT

StartP-valueSite
115.10e-09TAAGCTGATATTAGCCCTCAGAAGGGCTTTTTCTTTTAA
1389.83e-09AAAGTAGTCACGACCGTTAGGGAGTTCTTTTTAGTGGCA
3691.64e-08AAAAAAAAATCAAGTGTTTGCAAGGGTTTACAGATTTAA
2082.46e-08AGCGGAGCGACAAGAGCAACGTAGGGAGTTTAAATTTAG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000847 100.0 545 0 0 1 545 1 545 0.0 1007
pORI00000849 90.741 378 27 7 22 395 177 550 0.0 497
pORI00000532 90.741 378 27 7 22 395 379 752 0.0 497
pORI00000408 90.741 378 27 7 22 395 177 550 0.0 497
pORI00000349 90.556 360 27 7 22 377 894 1250 0.0 470
pORI00000113 90.323 341 25 8 22 357 334 671 0.0 440
pORI00000848 81.752 274 37 12 278 545 305 39 0.0 217
pORI00000397 81.295 278 39 12 253 522 334 62 0.0 213
pORI00000507 94.03 134 5 3 250 382 1075 1206 0.0 200
pORI00000378 80.524 267 31 21 267 522 1156 1412 0.0 185
pORI00000797 78.644 295 35 25 266 545 318 37 1.77965e-43 171
pORI00000790 83.516 182 18 11 266 439 1205 1382 3.85e-40 159
pORI00000208 86.567 134 11 7 267 395 1165 1296 1.4e-34 141
pORI00000982 74.088 274 44 24 284 545 299 41 1.84e-18 88
pORI00000260 84.375 96 7 7 263 356 180 269 1.84e-18 88