RefSeq NC_004528
DoriC accession number pORI00000260
OriC length 492 nt
OriC AT content 0.7154
The location of oriC region 7750..8241 nt
Browse in NCBI
OriC map
OriC sequences
CGTTAAACCTACTTATTTGCCCGTCTAAGCGTTTTTATCCATGTGACGTAGAAAATAATCATTGAACGGATTAAAACGCCTCTATGGGCTTAATAAGTGGTAATCAACTTATATACTTTGGAATCTATCTTTTAAAATCATCTAAAAAGAACACCCTGTACAAAATTATGTACACCGTGTTCTTTTGTTTTGTTTTTTATTGAATCAATAAAAAGGCGAAGCCTATTATAAGTTTATCTTTTATATTTTAATCTTTTGTTCTTTTGCGTAGTTATAAATATAGTGTTTGCAATGGATTCAAAGAAAAAACCAAGAGAAAAAACTATGTATATAGAGAGAAAAAACTATGCATATAGAGAGAAAAAACTATGCATATAGAGAATTTTAATTAATGATACTCTCTGTATTTTGGTACAATAAAAGCATAAAGAAATTCCCGACCAAAAGTTTTTCTTTATGCTTATTACACAAAACGCAAAGGAGCGTATTTAT
CGTTAAACCTACTTATTTGCCCGTCTAAGCGTTTTTATCCATGTGACGTAGAAAATAATCATTGAACGGATTAAAACGCCTCTATGGGCTTAATAAGTGGTAATCAACTTATATACTTTGGAATCTATCTTTTAAAATCATCTAAAAAGAACACCCTGTACAAAATTATGTACACCGTGTTCTTTTGTTTTGTTTTTTATTGAATCAATAAAAAGGCGAAGCCTATTATAAGTTTATCTTTTATATTTTAATCTTTTGTTCTTTTGCGTAGTTATAAATATAGTGTTTGCAATGGATTCAAAGAAAAAACCAAGAGAAAAAACTATGTATATAGAGAGAAAAAACTATGCATATAGAGAGAAAAAACTATGCATATAGAGAATTTTAATTAATGATACTCTCTGTATTTTGGTACAATAAAAGCATAAAGAAATTCCCGACCAAAAGTTTTTCTTTATGCTTATTACACAAAACGCAAAGGAGCGTATTTAT
AT-rich region
The information of repeat sequences

Motif GAAAAAACTATGYATATAGAG

StartP-valueSite
3602.07e-12CATATAGAGAGAAAAAACTATGCATATAGAGAATTTTAATT
3382.07e-12TATATAGAGAGAAAAAACTATGCATATAGAGAGAAAAAACT
3161.30e-11AAAACCAAGAGAAAAAACTATGTATATAGAGAGAAAAAACT
1596.21e-10GAACACCCTGTACAAAATTATGTACACCGTGTTCTTTTGTT

Motif CCCBWCTAWRAGTTT

StartP-valueSite
204.51e-10TACTTATTTGCCCGTCTAAGCGTTTTTATCCATGT
4362.59e-08TAAAGAAATTCCCGACCAAAAGTTTTTCTTTATGC
774.34e-08CGGATTAAAACGCCTCTATGGGCTTAATAAGTGGT
2217.75e-07AAAAGGCGAAGCCTATTATAAGTTTATCTTTTATA

Motif TCTTTTR

StartP-valueSite
2601.03e-04AATCTTTTGTTCTTTTGCGTAGTTATA
2521.03e-04TATATTTTAATCTTTTGTTCTTTTGCG
1811.03e-04TACACCGTGTTCTTTTGTTTTGTTTTT
2373.63e-04TATAAGTTTATCTTTTATATTTTAATC
1283.63e-04TTGGAATCTATCTTTTAAAATCATCTA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000260 100.0 492 0 0 1 492 1 492 0.0 909
pORI00000982 81.526 498 67 20 12 492 490 1 0.0 387
pORI00000506 79.839 496 80 16 12 492 12 502 0.0 344
pORI00000843 78.107 507 91 12 1 492 1 502 0.0 303
pORI00000787 77.668 506 90 21 1 492 1 497 0.0 287
pORI00000786 77.668 506 90 21 1 492 1 497 0.0 287
pORI00000511 77.668 506 90 21 1 492 1 497 0.0 287
pORI00000425 77.8 500 81 26 12 492 12 500 0.0 281
pORI00000482 76.389 504 100 19 1 492 1 497 0.0 254
pORI00000507 76.718 262 46 13 207 461 1120 1373 7.55e-32 132
pORI00000797 75.665 263 52 9 210 466 282 26 1.64e-28 121
pORI00000397 75.0 232 41 15 210 433 284 62 1.28e-19 92
pORI00000848 87.5 80 7 3 210 288 284 207 4.61e-19 90
pORI00000847 84.375 96 7 7 180 269 263 356 1.66e-18 88
pORI00000378 91.045 67 3 3 203 269 1186 1249 1.66e-18 88
pORI00000349 91.045 67 3 3 203 269 1168 1231 1.66e-18 88
pORI00000208 73.529 272 54 17 203 466 1195 1456 1.66e-18 88
pORI00000790 89.552 67 5 2 203 269 1236 1300 2.15e-17 84
pORI00000849 89.552 67 4 3 203 269 450 513 7.72e-17 82
pORI00000532 89.552 67 4 3 203 269 652 715 7.72e-17 82
pORI00000408 89.552 67 4 3 203 269 450 513 7.72e-17 82