RefSeq NC_008505
DoriC accession number pORI00000408
OriC length 780 nt
OriC AT content 0.6821
The location of oriC region 18417..19196 nt
Browse in NCBI
OriC map
OriC sequences
AGTAAAAAGACTTGCCAAGAAAAACATACGGTAAGTCTTTTTTGCTAGTCAAAACTTAACAGTTTTGACCTATTTTTAGCATGCAGATGAATAATGAGGTTAGAGCAGGTCATAAATAACGGTCATAGTTAAAAGCTAAAATTGTACGTTTTAGTCAATTACATACAAGCCTATTTAAGGGCTTTTTCTTTTATCCATGATAATTATCACTAACTCACGTTTAAAACCGCTTAGAATGCAAACTATGATCTTGTAGGACTATTCAAAGTGTTTAGACTAAACAAAGTAGCCACGACCGTTAGGGAGTTCTTTTTAGTGGCAGAATGTATCTAATATAAAATCAGAATGTACAAGCGGAGCGACAAGAGCAACGCAGGGAGTTTAAATTTAGAACTTCAATTCAATGGTTTTGACTTTTTCTTTTGACCTTGATTTTAATTTTTGAAAAAAATAAAAAAAGGCGAAGCCTATATTAATTTATCATATATATTTTAATCTTTTGTTCTTTTGCGTGGAAAAAAATCCGGTGTTTACAAGGGAATGCAGATTTTTATCACTACAAAAAGCGATGTATATCACTACAAAAAGCGATGTATATCACTACAAAAAGCGATGCATATCACTACAAAAAGCGATGTATATCACTACAAAAAGCGATGCATATCACTACAAAGTATTGTATATGTAGTGATTAAGTGGTATAATGAAAGCATAGAGAATACAGACCGCAAAATCAGTTTCTCTATGCTTAACCAAAATTACTCACAAAGGAGTATTTCT
AGTAAAAAGACTTGCCAAGAAAAACATACGGTAAGTCTTTTTTGCTAGTCAAAACTTAACAGTTTTGACCTATTTTTAGCATGCAGATGAATAATGAGGTTAGAGCAGGTCATAAATAACGGTCATAGTTAAAAGCTAAAATTGTACGTTTTAGTCAATTACATACAAGCCTATTTAAGGGCTTTTTCTTTTATCCATGATAATTATCACTAACTCACGTTTAAAACCGCTTAGAATGCAAACTATGATCTTGTAGGACTATTCAAAGTGTTTAGACTAAACAAAGTAGCCACGACCGTTAGGGAGTTCTTTTTAGTGGCAGAATGTATCTAATATAAAATCAGAATGTACAAGCGGAGCGACAAGAGCAACGCAGGGAGTTTAAATTTAGAACTTCAATTCAATGGTTTTGACTTTTTCTTTTGACCTTGATTTTAATTTTTGAAAAAAATAAAAAAAGGCGAAGCCTATATTAATTTATCATATATATTTTAATCTTTTGTTCTTTTGCGTGGAAAAAAATCCGGTGTTTACAAGGGAATGCAGATTTTTATCACTACAAAAAGCGATGTATATCACTACAAAAAGCGATGTATATCACTACAAAAAGCGATGCATATCACTACAAAAAGCGATGTATATCACTACAAAAAGCGATGCATATCACTACAAAGTATTGTATATGTAGTGATTAAGTGGTATAATGAAAGCATAGAGAATACAGACCGCAAAATCAGTTTCTCTATGCTTAACCAAAATTACTCACAAAGGAGTATTTCT
AT-rich region
The information of repeat sequences

Motif TATCACTACAAAAAGCGATGY

StartP-valueSite
6404.54e-13AAGCGATGTATATCACTACAAAAAGCGATGCATATCACTAC
5964.54e-13AAGCGATGTATATCACTACAAAAAGCGATGCATATCACTAC
6181.39e-12AAGCGATGCATATCACTACAAAAAGCGATGTATATCACTAC
5741.39e-12AAGCGATGTATATCACTACAAAAAGCGATGTATATCACTAC
5521.39e-12TGCAGATTTTTATCACTACAAAAAGCGATGTATATCACTAC

Motif GRCTTTTTCTTTTRWCCWTGAT

StartP-valueSite
4127.99e-13CAATGGTTTTGACTTTTTCTTTTGACCTTGATTTTAATTTTT
1807.99e-13CCTATTTAAGGGCTTTTTCTTTTATCCATGATAATTATCACT

Motif GTTCTTTTKMGTGG

StartP-valueSite
5028.64e-10TTAATCTTTTGTTCTTTTGCGTGGAAAAAAATCC
3068.49e-09CCGTTAGGGAGTTCTTTTTAGTGGCAGAATGTAT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000849 100.0 780 0 0 1 780 1 780 0.0 1441
pORI00000849 96.429 84 3 0 590 673 546 629 7.25e-34 139
pORI00000849 96.429 84 3 0 546 629 590 673 7.25e-34 139
pORI00000849 98.214 56 1 0 618 673 552 607 1.23e-21 99
pORI00000849 98.214 56 1 0 552 607 618 673 1.23e-21 99
pORI00000532 100.0 780 0 0 1 780 203 982 0.0 1441
pORI00000532 96.429 84 3 0 590 673 748 831 7.25e-34 139
pORI00000532 96.429 84 3 0 546 629 792 875 7.25e-34 139
pORI00000532 98.214 56 1 0 618 673 754 809 1.23e-21 99
pORI00000532 98.214 56 1 0 552 607 820 875 1.23e-21 99
pORI00000408 100.0 780 0 0 1 780 1 780 0.0 1441
pORI00000408 96.429 84 3 0 590 673 546 629 7.25e-34 139
pORI00000408 96.429 84 3 0 546 629 590 673 7.25e-34 139
pORI00000408 98.214 56 1 0 618 673 552 607 1.23e-21 99
pORI00000408 98.214 56 1 0 552 607 618 673 1.23e-21 99
pORI00000349 90.256 585 43 13 49 626 766 1343 0.0 752
pORI00000113 94.82 444 19 4 74 515 231 672 0.0 689
pORI00000847 90.741 378 27 7 177 550 22 395 0.0 497
pORI00000507 85.648 216 28 3 405 619 1075 1288 0.0 224
pORI00000378 84.259 216 20 13 422 629 1156 1365 0.0 198
pORI00000797 90.226 133 10 3 421 550 318 186 2.56438e-43 171
pORI00000790 93.913 115 4 3 421 532 1205 1319 2.56438e-43 171
pORI00000208 81.951 205 26 11 422 619 1165 1365 4.30002e-41 163
pORI00000397 87.681 138 14 3 408 542 334 197 2e-39 158
pORI00000397 94.444 36 2 0 738 773 44 9 7.51e-09 57
pORI00000848 89.216 102 8 3 433 533 305 206 2.03e-29 124
pORI00000260 89.552 67 4 3 450 513 203 269 1.24e-16 82
pORI00000982 75.882 170 34 4 455 620 285 119 4.46e-16 81