RefSeq | NZ_CP009501.1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
DoriC accession number | aORI10010277 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC length | 2479 nt | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC AT content | 0.2848 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
The location of oriC region | 2227021..2229499 nt | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Browse in NCBI | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC map | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC sequences |
AATGATCCTCTATAAAGATTTATGATGTCAAGTATGTTTGGGGTTAAGGTAGTTGATATACATTTTTTTATAAAGATAGTTGACACATTTATTTACTTTTAACATGGATAATCGGCACACTCAGCGTATTTGAGCAATGCTAATATACGCGATTAATTAATAAAGTAATATAATATACATAATTATATAATATACAAAGTTATACATGGCTATAAGGTGCACATTAAATTTGTAAAGTAAACATAATATACACTGTTAATTGACACAGTAAATAACTCGTATACTATCTTTACTTTACACCTACATTCATTTTTGCTTTTACAGCAACTGTTTTTAATGTTTTATTGCTTTAAAGTGTTTTTCAGCTGCCTGAAATCAGGATTTTTCACAGGCGGCTCCGTTTTTAATTCTCTGAACCTACAGCATTGAATACTCATGTTTTTAGAGCTATATTTTTATAAGTTCTCTAGGTATCTTTCCTGAAGTTACCTGCCTAAATTACCTGTTTAGATGACTTGCATAATCTGATTACTTGCCTAATAATCCTGATTATACTTGCCTAATAATCCTGATTACTTGCCTAATTTTTCTATCCATATTTTAGATAGCTGTAACCGTAATTGCTGTATAAGCCCTGTATTAATATCAATTGCTGCTAAACTATTTTCAGGTAATATTTTCTAAGTGGAGTTGTTTTTAGGTGATATTTTTAGGTAATGTTATGCTCTTGATCAAAGAGAGTCTCAGAGCCGTTATGAATAAGATTTTTTAATGGGAGTTCTGAAAGGGGGATTTGGAAAAGAATGTTTTTTAATTCCAAATTTCACTGAACTTCTAATCCAAATCTCACTAAACTTCTAATCCAAATCTCACTAAACTTCTAATCTTTAACTTCTAATAATCTTTAACTTCTAATCTTTAACTTCTAATCTTAAGATTCTACTATAAACTTTAATTTTGGTTTTTAATTTCGAGCGTTTAACTTTTAATTTTTAACTTTGAATGTTTAACTGCAAATTCTTAAATTAAAATTCTTAAATCTATATTATTATTTCGAGATTTCGAGGGTTAAACTCTACTTTATGATTGTTGGATATTTAGTACGCTGGATTTTTACCACATTGGATTTTTACTAGATATTTTTCTGCTTTCTATGAAAAAACCTGTAAACCCCAATCATGAGGGAGAAGGGATAGTAGATACATGTTTCTTATAGTTAATGCTTGAAATTCTTACCTTCTGTTAATTGCTCCTAAGACGTGGGGCAAATTTTACTTATTGAGGCGCATCTCAAGCCTGAAGAAAACCTTTATTCGGGGTCTTCTTTAGCCAAAATTTTAGGTGAAATTGGTATATAAACAAGTAATTTTAAGCTATATTTGCAGTAGATGCAATGGAAGTACACGTTATTAATTGTTATGGTATAGACCCTTTTATTTCCACTGGAACTTGATTTTATTTTAAATATATACCAAGAAAAACGATAACAGGAAACATAATCAATTTGAGCAAAAATATTCTTGATTCCATAACCACTGGAGGTTAAATTTTAATCCTTCTTTTCGTATGGAAGAAGTTATGAAAAGTTTTTACTCTTTTTCTAAAGTTAAAAGAATAAAAATTTTAAGATAAAATAAGAATCCTGTGTGAATTCAGTATGAGTGAATTTATTGCTGTAGTAAATTGAAAAAATTAAGATAGAGAAAATTGGAAAAATAAAAAATAGAAAATGAAAAATCAAAAGTTGGTCATAAAAATAAAGAAATGAGTAAAGTGAAAGAAAAATAAGTGAAAGTGGGCAGGAAAATAAGGGAAATTAGGAAAATAAAGGAAATAGGAAAAGTGAAAGAAAATAGGAAAAATAAGGGAAATAGAAAAGGTTAGAAAAGGTGAAAGGAAATAAAGAAAAATTAAAAAATAAGGGAAAAATAAGGAAATCTGGAAGAAAAAAAGAAAAGCTGAGAGAAAATAAGGAAAGAATGAATGAAAATAAAAAAGGACCCCTTTGTTTCCACTGGAAAGTTTATATAACCCCCGGACCCCATGATTTCCACTAAAAAGACATCAGGGCTTGAGCCAACAAAATAAAACGAAGTTTTATTTTAGTTGGGAACAAAATAATGTTGTTTAGTTATAGAAATTTTATTATATATAGTTAACTATTACTAAATATTTAATAATTAGTTTATTTAAATGAAAAGTAATGGAAAGATCGTCATTTTTTACCATTAGAAGACAGTTCCATTTGACATTTTAGTTCCATTTGACATTTTCCTTCTTCCATGAAAACATCTCCAATCGAAATAAAGGGGTCCCTCTCTAAAGAAGACATCTCTATGATTAAGATTTTGTGGAATTTTTTCTCTACTTTTTATTCTTTAAAGCAAGGTTTGGCTCTTCTAATTGTATTGTAGATTATCCGGTAATTAGCAGTTAATTCCATAAATCTTTTAAATAAAACTGGTTTTACTCTATGCAC
AATGATCCTCTATAAAGATTTATGATGTCAAGTATGTTTGGGGTTAAGGTAGTTGATATACATTTTTTTATAAAGATAGTTGACACATTTATTTACTTTTAACATGGATAATCGGCACACTCAGCGTATTTGAGCAATGCTAATATACGCGATTAATTAATAAAGTAATATAATATACATAATTATATAATATACAAAGTTATACATGGCTATAAGGTGCACATTAAATTTGTAAAGTAAACATAATATACACTGTTAATTGACACAGTAAATAACTCGTATACTATCTTTACTTTACACCTACATTCATTTTTGCTTTTACAGCAACTGTTTTTAATGTTTTATTGCTTTAAAGTGTTTTTCAGCTGCCTGAAATCAGGATTTTTCACAGGCGGCTCCGTTTTTAATTCTCTGAACCTACAGCATTGAATACTCATGTTTTTAGAGCTATATTTTTATAAGTTCTCTAGGTATCTTTCCTGAAGTTACCTGCCTAAATTACCTGTTTAGATGACTTGCATAATCTGATTACTTGCCTAATAATCCTGATTATACTTGCCTAATAATCCTGATTACTTGCCTAATTTTTCTATCCATATTTTAGATAGCTGTAACCGTAATTGCTGTATAAGCCCTGTATTAATATCAATTGCTGCTAAACTATTTTCAGGTAATATTTTCTAAGTGGAGTTGTTTTTAGGTGATATTTTTAGGTAATGTTATGCTCTTGATCAAAGAGAGTCTCAGAGCCGTTATGAATAAGATTTTTTAATGGGAGTTCTGAAAGGGGGATTTGGAAAAGAATGTTTTTTAATTCCAAATTTCACTGAACTTCTAATCCAAATCTCACTAAACTTCTAATCCAAATCTCACTAAACTTCTAATCTTTAACTTCTAATAATCTTTAACTTCTAATCTTTAACTTCTAATCTTAAGATTCTACTATAAACTTTAATTTTGGTTTTTAATTTCGAGCGTTTAACTTTTAATTTTTAACTTTGAATGTTTAACTGCAAATTCTTAAATTAAAATTCTTAAATCTATATTATTATTTCGAGATTTCGAGGGTTAAACTCTACTTTATGATTGTTGGATATTTAGTACGCTGGATTTTTACCACATTGGATTTTTACTAGATATTTTTCTGCTTTCTATGAAAAAACCTGTAAACCCCAATCATGAGGGAGAAGGGATAGTAGATACATGTTTCTTATAGTTAATGCTTGAAATTCTTACCTTCTGTTAATTGCTCCTAAGACGTGGGGCAAATTTTACTTATTGAGGCGCATCTCAAGCCTGAAGAAAACCTTTATTCGGGGTCTTCTTTAGCCAAAATTTTAGGTGAAATTGGTATATAAACAAGTAATTTTAAGCTATATTTGCAGTAGATGCAATGGAAGTACACGTTATTAATTGTTATGGTATAGACCCTTTTATTTCCACTGGAACTTGATTTTATTTTAAATATATACCAAGAAAAACGATAACAGGAAACATAATCAATTTGAGCAAAAATATTCTTGATTCCATAACCACTGGAGGTTAAATTTTAATCCTTCTTTTCGTATGGAAGAAGTTATGAAAAGTTTTTACTCTTTTTCTAAAGTTAAAAGAATAAAAATTTTAAGATAAAATAAGAATCCTGTGTGAATTCAGTATGAGTGAATTTATTGCTGTAGTAAATTGAAAAAATTAAGATAGAGAAAATTGGAAAAATAAAAAATAGAAAATGAAAAATCAAAAGTTGGTCATAAAAATAAAGAAATGAGTAAAGTGAAAGAAAAATAAGTGAAAGTGGGCAGGAAAATAAGGGAAATTAGGAAAATAAAGGAAATAGGAAAAGTGAAAGAAAATAGGAAAAATAAGGGAAATAGAAAAGGTTAGAAAAGGTGAAAGGAAATAAAGAAAAATTAAAAAATAAGGGAAAAATAAGGAAATCTGGAAGAAAAAAAGAAAAGCTGAGAGAAAATAAGGAAAGAATGAATGAAAATAAAAAAGGACCCCTTTGTTTCCACTGGAAAGTTTATATAACCCCCGGACCCCATGATTTCCACTAAAAAGACATCAGGGCTTGAGCCAACAAAATAAAACGAAGTTTTATTTTAGTTGGGAACAAAATAATGTTGTTTAGTTATAGAAATTTTATTATATATAGTTAACTATTACTAAATATTTAATAATTAGTTTATTTAAATGAAAAGTAATGGAAAGATCGTCATTTTTTACCATTAGAAGACAGTTCCATTTGACATTTTAGTTCCATTTGACATTTTCCTTCTTCCATGAAAACATCTCCAATCGAAATAAAGGGGTCCCTCTCTAAAGAAGACATCTCTATGATTAAGATTTTGTGGAATTTTTTCTCTACTTTTTATTCTTTAAAGCAAGGTTTGGCTCTTCTAATTGTATTGTAGATTATCCGGTAATTAGCAGTTAATTCCATAAATCTTTTAAATAAAACTGGTTTTACTCTATGCAC
AATGATCCTCTATAAAGATTTATGATGTCAAGTATGTTTGGGGTTAAGGTAGTTGATATACATTTTTTTATAAAGATAGTTGACACATTTATTTACTTTTAACATGGATAATCGGCACACTCAGCGTATTTGAGCAATGCTAATATACGCGATTAATTAATAAAGTAATATAATATACATAATTATATAATATACAAAGTTATACATGGCTATAAGGTGCACATTAAATTTGTAAAGTAAACATAATATACACTGTTAATTGACACAGTAAATAACTCGTATACTATCTTTACTTTACACCTACATTCATTTTTGCTTTTACAGCAACTGTTTTTAATGTTTTATTGCTTTAAAGTGTTTTTCAGCTGCCTGAAATCAGGATTTTTCACAGGCGGCTCCGTTTTTAATTCTCTGAACCTACAGCATTGAATACTCATGTTTTTAGAGCTATATTTTTATAAGTTCTCTAGGTATCTTTCCTGAAGTTACCTGCCTAAATTACCTGTTTAGATGACTTGCATAATCTGATTACTTGCCTAATAATCCTGATTATACTTGCCTAATAATCCTGATTACTTGCCTAATTTTTCTATCCATATTTTAGATAGCTGTAACCGTAATTGCTGTATAAGCCCTGTATTAATATCAATTGCTGCTAAACTATTTTCAGGTAATATTTTCTAAGTGGAGTTGTTTTTAGGTGATATTTTTAGGTAATGTTATGCTCTTGATCAAAGAGAGTCTCAGAGCCGTTATGAATAAGATTTTTTAATGGGAGTTCTGAAAGGGGGATTTGGAAAAGAATGTTTTTTAATTCCAAATTTCACTGAACTTCTAATCCAAATCTCACTAAACTTCTAATCCAAATCTCACTAAACTTCTAATCTTTAACTTCTAATAATCTTTAACTTCTAATCTTTAACTTCTAATCTTAAGATTCTACTATAAACTTTAATTTTGGTTTTTAATTTCGAGCGTTTAACTTTTAATTTTTAACTTTGAATGTTTAACTGCAAATTCTTAAATTAAAATTCTTAAATCTATATTATTATTTCGAGATTTCGAGGGTTAAACTCTACTTTATGATTGTTGGATATTTAGTACGCTGGATTTTTACCACATTGGATTTTTACTAGATATTTTTCTGCTTTCTATGAAAAAACCTGTAAACCCCAATCATGAGGGAGAAGGGATAGTAGATACATGTTTCTTATAGTTAATGCTTGAAATTCTTACCTTCTGTTAATTGCTCCTAAGACGTGGGGCAAATTTTACTTATTGAGGCGCATCTCAAGCCTGAAGAAAACCTTTATTCGGGGTCTTCTTTAGCCAAAATTTTAGGTGAAATTGGTATATAAACAAGTAATTTTAAGCTATATTTGCAGTAGATGCAATGGAAGTACACGTTATTAATTGTTATGGTATAGACCCTTTTATTTCCACTGGAACTTGATTTTATTTTAAATATATACCAAGAAAAACGATAACAGGAAACATAATCAATTTGAGCAAAAATATTCTTGATTCCATAACCACTGGAGGTTAAATTTTAATCCTTCTTTTCGTATGGAAGAAGTTATGAAAAGTTTTTACTCTTTTTCTAAAGTTAAAAGAATAAAAATTTTAAGATAAAATAAGAATCCTGTGTGAATTCAGTATGAGTGAATTTATTGCTGTAGTAAATTGAAAAAATTAAGATAGAGAAAATTGGAAAAATAAAAAATAGAAAATGAAAAATCAAAAGTTGGTCATAAAAATAAAGAAATGAGTAAAGTGAAAGAAAAATAAGTGAAAGTGGGCAGGAAAATAAGGGAAATTAGGAAAATAAAGGAAATAGGAAAAGTGAAAGAAAATAGGAAAAATAAGGGAAATAGAAAAGGTTAGAAAAGGTGAAAGGAAATAAAGAAAAATTAAAAAATAAGGGAAAAATAAGGAAATCTGGAAGAAAAAAAGAAAAGCTGAGAGAAAATAAGGAAAGAATGAATGAAAATAAAAAAGGACCCCTTTGTTTCCACTGGAAAGTTTATATAACCCCCGGACCCCATGATTTCCACTAAAAAGACATCAGGGCTTGAGCCAACAAAATAAAACGAAGTTTTATTTTAGTTGGGAACAAAATAATGTTGTTTAGTTATAGAAATTTTATTATATATAGTTAACTATTACTAAATATTTAATAATTAGTTTATTTAAATGAAAAGTAATGGAAAGATCGTCATTTTTTACCATTAGAAGACAGTTCCATTTGACATTTTAGTTCCATTTGACATTTTCCTTCTTCCATGAAAACATCTCCAATCGAAATAAAGGGGTCCCTCTCTAAAGAAGACATCTCTATGATTAAGATTTTGTGGAATTTTTTCTCTACTTTTTATTCTTTAAAGCAAGGTTTGGCTCTTCTAATTGTATTGTAGATTATCCGGTAATTAGCAGTTAATTCCATAAATCTTTTAAATAAAACTGGTTTTACTCTATGCAC
ORB
AT-rich region
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The information of repeat sequences |
Motif YTWAACTTCTAATCYWWAWCT
Motif GGACCCYTTTWTTTCCACTGRAAMK
Motif TACTTGCCTAATWWTCCTG
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The result of BLAST |
Download
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