| RefSeq | NZ_CP009508.1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| DoriC accession number | aORI10010280 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| OriC length | 2014 nt | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| OriC AT content | 0.2925 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| The location of oriC region | 5426789..912 nt | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Browse in NCBI | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| OriC map | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| OriC sequences |
TGTTTAGCTCCTTTTTTTAGTAAAATTCCTTTTTTAGTAAAATTCCTTTTTTAGTACAACTTCAGTTTTTGTAGATTTTTTTAGTTTCTTATGTGGAACAAATATTCTGTAAACAAATATTCTGTAAACAAATATTCTGTAAACAAATATCCTGTTTTTCACAGGTACATTTATCTCAAAAATCTCTATCTTCACAGCTGTAGATCAGTAGTCTTGTGCAGTTAATGTTGTTCCAGATAAGAGCACATTCGTTAAGCAAGATTACTTCTGTCAACACTACTTCTGTCTGCAAATTTGTCATTTACGGCATTGTCGACAGCCATGTTCAAAGAAGTGTATTTAAGAGACACATGTCAATTCTAAAATATTATTATATGTTATTTATATTATGGAATATAATTACTTAAATCAGTTCCATACTTTCTTGTTATCCGGATATTAAAAACAGTTCGTTTTACTTCTATACTTTTAAAATATTATTAAGATTATTAAGAGCAGTATCATTTCCGCTCTTTTCTTCAAAAAGTCTTTTAAAAATTTTGAGTATGATTATTTCTTTATTAAAGTGAGAGTAAAATTGCAGTAGATGATAAGTGGGATAGTGCTGTAGACAGTATGGTAGACAAATATTACTGACAGTTCCGGAACTGAACAACAGGTTCTAAAATAAATCTTTAGAAAAACAATAGGACGTTTAAAAATACCCAGTTAACGTAAAATTTGTAAGTTAATGTATAAACAGAGCCGTTTTTTTATGTATTTACACTCAATGAATATAGTTACTTTTAATATATATCCCTCATTTCCAGTAAAACTATATTCATTTTTTTACTAATTGTTTTGTCATCAATGATCTTACTCACATCAAAACTGTTCTAATTTTTAACACATCCACTTTCGTTTCAGTAAAGGTTTTCTCTTCTCATCTTTATTATCTATTAATAAATATTTTTAGTAGTTTAATGGAAATAAAGGGGTCTAAAATGCTCCGATTTTCTTCCATTAGAAAAAGGGGATTTAAAACTGACCTCAAAAGGTGCTGGAAATTCTAATATTTTATTTTTTTAAGACTGGTTTTAATGATGTCGATTTTTCCAGGGGATATTTATGTTTAAACACAACTCCAATGGAAATAAAGGGGTCCTCACCATAACTATTAATACCGTGTACTTCCATTGCATCTACTGCAAATATGTCCTGATATCATATGTTTATATACAATTATTATCGAAAATTTTAGCTAAAGAGCATTCCGAATACAGATTTAATATAGATTTATCAGGGTTTAAGAGATACCTTAAAGTGCGCAACCAGCTCTTCAGTTTATCCCCTTTCCGTTGGGAATAAAAATTTCAGGCAATTTCAGGCATTACCTTTAAGAAACATGCATTTATCTATCCATCTTCCTTCGTGGAATTCTCATTAATAAGGTTTGACCTATCAAAATTATACGAAATAACAAACCAGGTTTCCAGAATTATCGAGAATCAATAGTGAAAGACAATTTGAAAATTAACAATTACACCTTCCCATATATCTTTTCCATGTCTGGATGTTCTAAATTTCCGAAATATAACTTCGGAATAATGAAAATGTTCTAAAACTCTTTCAAAATCTGAATTAAACATTTATAATTTCCTCGATTATCGGACCAATGGAAAATTGATGATATGATACTTCAGGCAGGACTTTCAAGCATTTAAACTTGGCATAATAATTGGGACTGAAAATTAGGACTTAAAACTAAAAAAATTAAGGGTCAAATATCAAGGGTCAAAGAAGAATTGTAAAATTAAGTTAAAAACGAAACTGAAAATTAAGGTTGAAAATTTAAGATTAATAAGGAAAAACGCATGCAAGCTCATTAAATTTATTTGACTTGCTCTTAACATTTGACTTGCTCTTAACTTTACACACTCTGTCTGTGCATTTACCGCACATATAATTGTCCATATAAATTCGTTCAATCCGTTACATCTGTGTTTTTATAACTTTTATACGAAGAGGGTCATTC
TGTTTAGCTCCTTTTTTTAGTAAAATTCCTTTTTTAGTAAAATTCCTTTTTTAGTACAACTTCAGTTTTTGTAGATTTTTTTAGTTTCTTATGTGGAACAAATATTCTGTAAACAAATATTCTGTAAACAAATATTCTGTAAACAAATATCCTGTTTTTCACAGGTACATTTATCTCAAAAATCTCTATCTTCACAGCTGTAGATCAGTAGTCTTGTGCAGTTAATGTTGTTCCAGATAAGAGCACATTCGTTAAGCAAGATTACTTCTGTCAACACTACTTCTGTCTGCAAATTTGTCATTTACGGCATTGTCGACAGCCATGTTCAAAGAAGTGTATTTAAGAGACACATGTCAATTCTAAAATATTATTATATGTTATTTATATTATGGAATATAATTACTTAAATCAGTTCCATACTTTCTTGTTATCCGGATATTAAAAACAGTTCGTTTTACTTCTATACTTTTAAAATATTATTAAGATTATTAAGAGCAGTATCATTTCCGCTCTTTTCTTCAAAAAGTCTTTTAAAAATTTTGAGTATGATTATTTCTTTATTAAAGTGAGAGTAAAATTGCAGTAGATGATAAGTGGGATAGTGCTGTAGACAGTATGGTAGACAAATATTACTGACAGTTCCGGAACTGAACAACAGGTTCTAAAATAAATCTTTAGAAAAACAATAGGACGTTTAAAAATACCCAGTTAACGTAAAATTTGTAAGTTAATGTATAAACAGAGCCGTTTTTTTATGTATTTACACTCAATGAATATAGTTACTTTTAATATATATCCCTCATTTCCAGTAAAACTATATTCATTTTTTTACTAATTGTTTTGTCATCAATGATCTTACTCACATCAAAACTGTTCTAATTTTTAACACATCCACTTTCGTTTCAGTAAAGGTTTTCTCTTCTCATCTTTATTATCTATTAATAAATATTTTTAGTAGTTTAATGGAAATAAAGGGGTCTAAAATGCTCCGATTTTCTTCCATTAGAAAAAGGGGATTTAAAACTGACCTCAAAAGGTGCTGGAAATTCTAATATTTTATTTTTTTAAGACTGGTTTTAATGATGTCGATTTTTCCAGGGGATATTTATGTTTAAACACAACTCCAATGGAAATAAAGGGGTCCTCACCATAACTATTAATACCGTGTACTTCCATTGCATCTACTGCAAATATGTCCTGATATCATATGTTTATATACAATTATTATCGAAAATTTTAGCTAAAGAGCATTCCGAATACAGATTTAATATAGATTTATCAGGGTTTAAGAGATACCTTAAAGTGCGCAACCAGCTCTTCAGTTTATCCCCTTTCCGTTGGGAATAAAAATTTCAGGCAATTTCAGGCATTACCTTTAAGAAACATGCATTTATCTATCCATCTTCCTTCGTGGAATTCTCATTAATAAGGTTTGACCTATCAAAATTATACGAAATAACAAACCAGGTTTCCAGAATTATCGAGAATCAATAGTGAAAGACAATTTGAAAATTAACAATTACACCTTCCCATATATCTTTTCCATGTCTGGATGTTCTAAATTTCCGAAATATAACTTCGGAATAATGAAAATGTTCTAAAACTCTTTCAAAATCTGAATTAAACATTTATAATTTCCTCGATTATCGGACCAATGGAAAATTGATGATATGATACTTCAGGCAGGACTTTCAAGCATTTAAACTTGGCATAATAATTGGGACTGAAAATTAGGACTTAAAACTAAAAAAATTAAGGGTCAAATATCAAGGGTCAAAGAAGAATTGTAAAATTAAGTTAAAAACGAAACTGAAAATTAAGGTTGAAAATTTAAGATTAATAAGGAAAAACGCATGCAAGCTCATTAAATTTATTTGACTTGCTCTTAACATTTGACTTGCTCTTAACTTTACACACTCTGTCTGTGCATTTACCGCACATATAATTGTCCATATAAATTCGTTCAATCCGTTACATCTGTGTTTTTATAACTTTTATACGAAGAGGGTCATTC
TGTTTAGCTCCTTTTTTTAGTAAAATTCCTTTTTTAGTAAAATTCCTTTTTTAGTACAACTTCAGTTTTTGTAGATTTTTTTAGTTTCTTATGTGGAACAAATATTCTGTAAACAAATATTCTGTAAACAAATATTCTGTAAACAAATATCCTGTTTTTCACAGGTACATTTATCTCAAAAATCTCTATCTTCACAGCTGTAGATCAGTAGTCTTGTGCAGTTAATGTTGTTCCAGATAAGAGCACATTCGTTAAGCAAGATTACTTCTGTCAACACTACTTCTGTCTGCAAATTTGTCATTTACGGCATTGTCGACAGCCATGTTCAAAGAAGTGTATTTAAGAGACACATGTCAATTCTAAAATATTATTATATGTTATTTATATTATGGAATATAATTACTTAAATCAGTTCCATACTTTCTTGTTATCCGGATATTAAAAACAGTTCGTTTTACTTCTATACTTTTAAAATATTATTAAGATTATTAAGAGCAGTATCATTTCCGCTCTTTTCTTCAAAAAGTCTTTTAAAAATTTTGAGTATGATTATTTCTTTATTAAAGTGAGAGTAAAATTGCAGTAGATGATAAGTGGGATAGTGCTGTAGACAGTATGGTAGACAAATATTACTGACAGTTCCGGAACTGAACAACAGGTTCTAAAATAAATCTTTAGAAAAACAATAGGACGTTTAAAAATACCCAGTTAACGTAAAATTTGTAAGTTAATGTATAAACAGAGCCGTTTTTTTATGTATTTACACTCAATGAATATAGTTACTTTTAATATATATCCCTCATTTCCAGTAAAACTATATTCATTTTTTTACTAATTGTTTTGTCATCAATGATCTTACTCACATCAAAACTGTTCTAATTTTTAACACATCCACTTTCGTTTCAGTAAAGGTTTTCTCTTCTCATCTTTATTATCTATTAATAAATATTTTTAGTAGTTTAATGGAAATAAAGGGGTCTAAAATGCTCCGATTTTCTTCCATTAGAAAAAGGGGATTTAAAACTGACCTCAAAAGGTGCTGGAAATTCTAATATTTTATTTTTTTAAGACTGGTTTTAATGATGTCGATTTTTCCAGGGGATATTTATGTTTAAACACAACTCCAATGGAAATAAAGGGGTCCTCACCATAACTATTAATACCGTGTACTTCCATTGCATCTACTGCAAATATGTCCTGATATCATATGTTTATATACAATTATTATCGAAAATTTTAGCTAAAGAGCATTCCGAATACAGATTTAATATAGATTTATCAGGGTTTAAGAGATACCTTAAAGTGCGCAACCAGCTCTTCAGTTTATCCCCTTTCCGTTGGGAATAAAAATTTCAGGCAATTTCAGGCATTACCTTTAAGAAACATGCATTTATCTATCCATCTTCCTTCGTGGAATTCTCATTAATAAGGTTTGACCTATCAAAATTATACGAAATAACAAACCAGGTTTCCAGAATTATCGAGAATCAATAGTGAAAGACAATTTGAAAATTAACAATTACACCTTCCCATATATCTTTTCCATGTCTGGATGTTCTAAATTTCCGAAATATAACTTCGGAATAATGAAAATGTTCTAAAACTCTTTCAAAATCTGAATTAAACATTTATAATTTCCTCGATTATCGGACCAATGGAAAATTGATGATATGATACTTCAGGCAGGACTTTCAAGCATTTAAACTTGGCATAATAATTGGGACTGAAAATTAGGACTTAAAACTAAAAAAATTAAGGGTCAAATATCAAGGGTCAAAGAAGAATTGTAAAATTAAGTTAAAAACGAAACTGAAAATTAAGGTTGAAAATTTAAGATTAATAAGGAAAAACGCATGCAAGCTCATTAAATTTATTTGACTTGCTCTTAACATTTGACTTGCTCTTAACTTTACACACTCTGTCTGTGCATTTACCGCACATATAATTGTCCATATAAATTCGTTCAATCCGTTACATCTGTGTTTTTATAACTTTTATACGAAGAGGGTCATTC
ORB
AT-rich region
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| The information of repeat sequences |
Motif AGWASTYTWATGSAWWTAAAGKKGTC
Motif AACAAATATTCTGT
Motif SRAWYTGAAAAWTARGATTTAAAAY
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| The result of BLAST |
Download
|