RefSeq NC_020389.1
DoriC accession number aORI10010192
OriC length 1334 nt
OriC AT content 0.6927
The location of oriC region 1340753..1342086 nt
Browse in NCBI
OriC map
OriC sequences
TGCGGTTTTTCCTGTCCCTGTTTTTCCGTAAATCAGGACATTTGAAGGAGTTTCTCCCCTGAGCGCGGATACCAGGATGGTTGCAAGGCTGTTTATCTGGTCGTTTCTGTGTAATAACAGATCCGGAGTATAAGAAGGACGAAGGACTTCTAAGTAATTTTTCGAACAAGCCGTCTAATGATTGAGCCTTTATCATAATGACCCTCTTAATAAAAGTTATAATATCATGGATTTGTTATAATATCTGGATTTAACGGGTTAGGATAGCCTAACATATAGCTGACATAATATGCAGAGTTATTAATGCAAAGTAAATAAGCCGTTTAAGAAAATACGGTCTAAAGAATGTTTTTCTCTTCTCACTTCAAATACTGCATAGTTAAACTCTACATAGCAAAGATATTTGGGAAGGTTTAACTGCTATTTTTTAAAGTGTTTTTTATTCTTAATAAGTGAACATAAATAATAATAGATTCACAGGGGAAGAATGGATAGACAAATGCATGTTTCTTAAAGTTAATGCCTGAAATTTTTATTCAAGGGATACTAATAACACGCTGAAAAGTCAGTTGCGCACTTTAAAGTATCTCTTAATCCCTGATTGAATGTGTATTCGGAACATTCTTTCATCCAATTTCAGTTCACATTTGCAGTAGATGCAATGGAAGTACACGGTATTAATAGTTATGGTAAAGACCCCTTTGTTTCCACTGGAACAGTTATTTGCCTTAAATATTATACAAAAAAATCAATATCAATAGAGCATGTGAAAATAAAATAAAAAATCAAAAATTTTAAATAATAATTGAAGTAAACAGGTTCCTGAATCGAAACGAAAGTGGTTGTATTAAAAATGAAAACAGTCTTGATACGAATAACAATTAAGAAAAGAAAAAAATTAATAATAAATAAAAAACAGTTAGGAAGAAAAAAGCAATATAACCTGAAACTAAACATATATAAAAAGTATAAATAATCAAAAAAGAATAATAATCTTAAAATAACTTATTTAATTTCCGAAGTAAAACGAACTGCTTTTAATCCCTGATGACAAGACAGTATTATAAAACTGTAGAGATACTGATCTACAGCTATAGTATAAATGTGCATGAAGATGCAATACATGAGAAGCGATACACGAGAAGCGATAAATGAAAAGCGATAAATGAGAAGCGATACACGAGAAGCGATAAATGAGAAGCGATAAATGAGAATGTGACTCATAAAACGCAATTTATGAAACGCAATTCATAAGACATAATGTTTGATTGAAAACGAGATTACAAACGAAATTGATTAAAAAATAGGCTTTTGCTAAAAAATGGAGTTAAATC
TGCGGTTTTTCCTGTCCCTGTTTTTCCGTAAATCAGGACATTTGAAGGAGTTTCTCCCCTGAGCGCGGATACCAGGATGGTTGCAAGGCTGTTTATCTGGTCGTTTCTGTGTAATAACAGATCCGGAGTATAAGAAGGACGAAGGACTTCTAAGTAATTTTTCGAACAAGCCGTCTAATGATTGAGCCTTTATCATAATGACCCTCTTAATAAAAGTTATAATATCATGGATTTGTTATAATATCTGGATTTAACGGGTTAGGATAGCCTAACATATAGCTGACATAATATGCAGAGTTATTAATGCAAAGTAAATAAGCCGTTTAAGAAAATACGGTCTAAAGAATGTTTTTCTCTTCTCACTTCAAATACTGCATAGTTAAACTCTACATAGCAAAGATATTTGGGAAGGTTTAACTGCTATTTTTTAAAGTGTTTTTTATTCTTAATAAGTGAACATAAATAATAATAGATTCACAGGGGAAGAATGGATAGACAAATGCATGTTTCTTAAAGTTAATGCCTGAAATTTTTATTCAAGGGATACTAATAACACGCTGAAAAGTCAGTTGCGCACTTTAAAGTATCTCTTAATCCCTGATTGAATGTGTATTCGGAACATTCTTTCATCCAATTTCAGTTCACATTTGCAGTAGATGCAATGGAAGTACACGGTATTAATAGTTATGGTAAAGACCCCTTTGTTTCCACTGGAACAGTTATTTGCCTTAAATATTATACAAAAAAATCAATATCAATAGAGCATGTGAAAATAAAATAAAAAATCAAAAATTTTAAATAATAATTGAAGTAAACAGGTTCCTGAATCGAAACGAAAGTGGTTGTATTAAAAATGAAAACAGTCTTGATACGAATAACAATTAAGAAAAGAAAAAAATTAATAATAAATAAAAAACAGTTAGGAAGAAAAAAGCAATATAACCTGAAACTAAACATATATAAAAAGTATAAATAATCAAAAAAGAATAATAATCTTAAAATAACTTATTTAATTTCCGAAGTAAAACGAACTGCTTTTAATCCCTGATGACAAGACAGTATTATAAAACTGTAGAGATACTGATCTACAGCTATAGTATAAATGTGCATGAAGATGCAATACATGAGAAGCGATACACGAGAAGCGATAAATGAAAAGCGATAAATGAGAAGCGATACACGAGAAGCGATAAATGAGAAGCGATAAATGAGAATGTGACTCATAAAACGCAATTTATGAAACGCAATTCATAAGACATAATGTTTGATTGAAAACGAGATTACAAACGAAATTGATTAAAAAATAGGCTTTTGCTAAAAAATGGAGTTAAATC
TGCGGTTTTTCCTGTCCCTGTTTTTCCGTAAATCAGGACATTTGAAGGAGTTTCTCCCCTGAGCGCGGATACCAGGATGGTTGCAAGGCTGTTTATCTGGTCGTTTCTGTGTAATAACAGATCCGGAGTATAAGAAGGACGAAGGACTTCTAAGTAATTTTTCGAACAAGCCGTCTAATGATTGAGCCTTTATCATAATGACCCTCTTAATAAAAGTTATAATATCATGGATTTGTTATAATATCTGGATTTAACGGGTTAGGATAGCCTAACATATAGCTGACATAATATGCAGAGTTATTAATGCAAAGTAAATAAGCCGTTTAAGAAAATACGGTCTAAAGAATGTTTTTCTCTTCTCACTTCAAATACTGCATAGTTAAACTCTACATAGCAAAGATATTTGGGAAGGTTTAACTGCTATTTTTTAAAGTGTTTTTTATTCTTAATAAGTGAACATAAATAATAATAGATTCACAGGGGAAGAATGGATAGACAAATGCATGTTTCTTAAAGTTAATGCCTGAAATTTTTATTCAAGGGATACTAATAACACGCTGAAAAGTCAGTTGCGCACTTTAAAGTATCTCTTAATCCCTGATTGAATGTGTATTCGGAACATTCTTTCATCCAATTTCAGTTCACATTTGCAGTAGATGCAATGGAAGTACACGGTATTAATAGTTATGGTAAAGACCCCTTTGTTTCCACTGGAACAGTTATTTGCCTTAAATATTATACAAAAAAATCAATATCAATAGAGCATGTGAAAATAAAATAAAAAATCAAAAATTTTAAATAATAATTGAAGTAAACAGGTTCCTGAATCGAAACGAAAGTGGTTGTATTAAAAATGAAAACAGTCTTGATACGAATAACAATTAAGAAAAGAAAAAAATTAATAATAAATAAAAAACAGTTAGGAAGAAAAAAGCAATATAACCTGAAACTAAACATATATAAAAAGTATAAATAATCAAAAAAGAATAATAATCTTAAAATAACTTATTTAATTTCCGAAGTAAAACGAACTGCTTTTAATCCCTGATGACAAGACAGTATTATAAAACTGTAGAGATACTGATCTACAGCTATAGTATAAATGTGCATGAAGATGCAATACATGAGAAGCGATACACGAGAAGCGATAAATGAAAAGCGATAAATGAGAAGCGATACACGAGAAGCGATAAATGAGAAGCGATAAATGAGAATGTGACTCATAAAACGCAATTTATGAAACGCAATTCATAAGACATAATGTTTGATTGAAAACGAGATTACAAACGAAATTGATTAAAAAATAGGCTTTTGCTAAAAAATGGAGTTAAATC
ORB     AT-rich region
The information of repeat sequences

Motif GAGAAGCGATA

StartP-valueSite
11963.49e-07AGCGATAAATGAGAAGCGATAAATGAGAATG
11823.49e-07AGCGATACACGAGAAGCGATAAATGAGAAGC
11683.49e-07AGCGATAAATGAGAAGCGATACACGAGAAGC
11403.49e-07AGCGATACACGAGAAGCGATAAATGAAAAGC
11263.49e-07TGCAATACATGAGAAGCGATACACGAGAAGC

Motif GSDGTTTHTCYKSTCABTKC

StartP-valueSite
21.31e-10TGCGGTTTTTCCTGTCCCTGTTTTTCCGTAA
472.20e-10GACATTTGAAGGAGTTTCTCCCCTGAGCGCGGATACCAGG
3476.57e-10GTCTAAAGAATGTTTTTCTCTTCTCACTTCAAATACTGCA
886.57e-10TGGTTGCAAGGCTGTTTATCTGGTCGTTTCTGTGTAATAA

Motif TTAATSCCTG

StartP-valueSite
10385.12e-07CGAACTGCTTTTAATCCCTGATGACAAGAC
5915.12e-07AAAGTATCTCTTAATCCCTGATTGAATGTG
5171.16e-06TTTCTTAAAGTTAATGCCTGAAATTTTTAT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010192 100.0 1334 0 0 1 1334 1 1334 0.0 2464
aORI10010192 92.188 64 4 1 1152 1214 1109 1172 3.72e-19 90
aORI10010192 92.188 64 4 1 1109 1172 1152 1214 3.72e-19 90
aORI10010285 99.666 299 1 0 985 1283 418 120 0.0 547
aORI10010285 100.0 250 0 0 197 446 1586 1337 0.0 462
aORI10010285 100.0 189 0 0 796 984 803 615 0.0 350
aORI10010285 100.0 183 0 0 445 627 1290 1108 0.0 339
aORI10010285 96.809 188 4 1 628 815 1075 890 0.0 313
aORI10010285 98.182 55 1 0 1280 1334 55 1 2.22e-21 97
aORI10010285 92.188 64 4 1 1109 1172 251 189 3.72e-19 90
aORI10010285 92.188 64 4 1 1152 1214 294 231 3.72e-19 90
aORI10010284 99.666 299 1 0 985 1283 418 120 0.0 547
aORI10010284 100.0 250 0 0 197 446 1586 1337 0.0 462
aORI10010284 100.0 189 0 0 796 984 803 615 0.0 350
aORI10010284 100.0 183 0 0 445 627 1290 1108 0.0 339
aORI10010284 96.809 188 4 1 628 815 1075 890 0.0 313
aORI10010284 98.182 55 1 0 1280 1334 55 1 2.22e-21 97
aORI10010284 92.188 64 4 1 1109 1172 251 189 3.72e-19 90
aORI10010284 92.188 64 4 1 1152 1214 294 231 3.72e-19 90
aORI10010283 99.666 299 1 0 985 1283 418 120 0.0 547
aORI10010283 100.0 250 0 0 197 446 1585 1336 0.0 462
aORI10010283 100.0 189 0 0 796 984 803 615 0.0 350
aORI10010283 100.0 183 0 0 445 627 1289 1107 0.0 339
aORI10010283 96.277 188 4 2 628 815 1074 890 0.0 305
aORI10010283 98.182 55 1 0 1280 1334 55 1 2.22e-21 97
aORI10010283 92.188 64 4 1 1109 1172 251 189 3.72e-19 90
aORI10010283 92.188 64 4 1 1152 1214 294 231 3.72e-19 90
aORI10010281 99.666 299 1 0 985 1283 418 120 0.0 547
aORI10010281 100.0 250 0 0 197 446 1586 1337 0.0 462
aORI10010281 100.0 189 0 0 796 984 803 615 0.0 350
aORI10010281 100.0 183 0 0 445 627 1290 1108 0.0 339
aORI10010281 96.809 188 4 1 628 815 1075 890 0.0 313
aORI10010281 98.182 55 1 0 1280 1334 55 1 2.22e-21 97
aORI10010281 92.188 64 4 1 1109 1172 251 189 3.72e-19 90
aORI10010281 92.188 64 4 1 1152 1214 294 231 3.72e-19 90
aORI10010018 99.666 299 1 0 985 1283 1168 1466 0.0 547
aORI10010018 100.0 250 0 0 197 446 1 250 0.0 462
aORI10010018 100.0 189 0 0 796 984 783 971 0.0 350
aORI10010018 100.0 183 0 0 445 627 297 479 0.0 339
aORI10010018 99.408 169 0 1 628 796 512 679 0.0 305
aORI10010018 89.744 78 4 1 1261 1334 1508 1585 2.22e-21 97
aORI10010018 92.188 64 4 1 1152 1214 1292 1355 3.72e-19 90
aORI10010018 92.188 64 4 1 1109 1172 1335 1397 3.72e-19 90
aORI10010282 100.0 250 0 0 197 446 1628 1379 0.0 462
aORI10010282 97.391 230 6 0 985 1214 460 231 0.0 392
aORI10010282 100.0 189 0 0 796 984 845 657 0.0 350
aORI10010282 100.0 183 0 0 445 627 1332 1150 0.0 339
aORI10010282 96.277 188 5 1 628 815 1117 932 0.0 307
aORI10010282 97.076 171 5 0 1113 1283 290 120 0.0 289
aORI10010282 98.182 55 1 0 1280 1334 55 1 2.22e-21 97
aORI10010282 92.188 64 4 1 1109 1172 251 189 3.72e-19 90
aORI10010017 91.262 103 9 0 634 736 878 980 1.01e-34 141
aORI10010287 82.895 152 24 2 644 794 942 792 4.71e-33 135
aORI10010287 82.278 158 25 3 471 627 1146 991 1.69e-32 134
aORI10010287 90.323 93 7 2 1000 1090 249 157 1.32e-28 121
aORI10010379 92.045 88 7 0 646 733 1025 938 1.02e-29 124
aORI10010379 79.762 168 24 8 471 634 1231 1070 2.21e-26 113
aORI10010378 92.045 88 7 0 646 733 993 906 1.02e-29 124
aORI10010378 79.762 168 24 8 471 634 1199 1038 2.21e-26 113
aORI10010286 87.379 103 11 2 633 734 1069 968 1.71e-27 117
aORI10010286 89.062 64 4 2 473 536 1260 1200 2.9e-15 77
aORI10010382 89.011 91 10 0 646 736 1284 1194 2.21e-26 113
aORI10010381 83.471 121 17 3 633 752 1273 1155 2.86e-25 110
aORI10010280 94.286 70 4 0 646 715 1192 1123 1.03e-24 108
aORI10010279 94.286 70 4 0 646 715 1188 1119 1.03e-24 108
aORI10010277 85.849 106 10 5 646 748 1378 1481 1.03e-24 108
aORI10010380 93.056 72 5 0 646 717 424 353 3.69e-24 106
aORI10010278 89.189 74 8 0 643 716 585 512 2.88e-20 94