RefSeq NC_015666.1
DoriC accession number aORI10010171
OriC length 954 nt
OriC AT content 0.4706
The location of oriC region 729722..730675 nt
Browse in NCBI
OriC map
OriC sequences
CTGTAGGGCCCTCCAGCACCGCGGGGTGCATCTGAGCGTACTACTGACTGAATTCACTTAAGCTTATGTCAGACATATCTATAAACCAACAACAGTGAGTTATCAGGAGGGATGTGAAAGTATGTCTCTCATTAATCCGATATGTAGGGTGGTCCATGGCAACGATTGGCTCGATCCGGCCGTGGTCCCCCACCCCTTTGTTTCAACTGGAGAGTGCCGAGGGTGCGGTGTCCCGGAGCAGTTCGATCGGTCAATCGGACCCCTTTCCTTCGAGTCGAGCCGAAAAGAGAGGGTCTCTCCGGACGGAATCGGGCGGACCCAGCGGTTCTAGTAACTCGAGGTGCTCTAGATCGCGAATCTAGTTGAAACTAGTAACTAGCTGCAACAGCCCTAGTAAAGTCCTAGATTTGCTAGTCGTTCGGATATTGTTTTTCAGGCAGTCACCTAAAGCTTCTCCTTCTAGAGACACCTTCTCCCCACCCACCCCTTCTTCAGGCCGTTCCACCTGAAACGAAGGGGTGGGGGGCTTCCGATGATCATCGTCGATCTTCCAAACTGATCACGAGTCACGATATCGAGGCCCACTATTCATCAGAATCCTGTTCTATCTTTCCAGACACTGTTCGACGATATCATATCGTCCGGTCTACCGGCTTCCAGAACGATGTGCCAGGGCGTTCGCCGACCGCCTAATCCATCATTAGGTCACACGGGCATAGCAGCAGGGTACCCTAATCCCGTACTGCAGCGTTGCAAGCGAGTCCAGTCTCGATTACCCCCGTGAATCGAAGGGAAGAATTTAATACAACGCTCTTCCTCTGTTTCGTTTGCATCAACTGGACCCGGACCGGGTTGCTGGAATCGTTGATGGGCCCCTACGGCCCGTCTACCTCGCTACATTCCTGATCTCGGGTTCGGATTTCCACCTGAAACAAGGGGGTGACTGTACGACGG
CTGTAGGGCCCTCCAGCACCGCGGGGTGCATCTGAGCGTACTACTGACTGAATTCACTTAAGCTTATGTCAGACATATCTATAAACCAACAACAGTGAGTTATCAGGAGGGATGTGAAAGTATGTCTCTCATTAATCCGATATGTAGGGTGGTCCATGGCAACGATTGGCTCGATCCGGCCGTGGTCCCCCACCCCTTTGTTTCAACTGGAGAGTGCCGAGGGTGCGGTGTCCCGGAGCAGTTCGATCGGTCAATCGGACCCCTTTCCTTCGAGTCGAGCCGAAAAGAGAGGGTCTCTCCGGACGGAATCGGGCGGACCCAGCGGTTCTAGTAACTCGAGGTGCTCTAGATCGCGAATCTAGTTGAAACTAGTAACTAGCTGCAACAGCCCTAGTAAAGTCCTAGATTTGCTAGTCGTTCGGATATTGTTTTTCAGGCAGTCACCTAAAGCTTCTCCTTCTAGAGACACCTTCTCCCCACCCACCCCTTCTTCAGGCCGTTCCACCTGAAACGAAGGGGTGGGGGGCTTCCGATGATCATCGTCGATCTTCCAAACTGATCACGAGTCACGATATCGAGGCCCACTATTCATCAGAATCCTGTTCTATCTTTCCAGACACTGTTCGACGATATCATATCGTCCGGTCTACCGGCTTCCAGAACGATGTGCCAGGGCGTTCGCCGACCGCCTAATCCATCATTAGGTCACACGGGCATAGCAGCAGGGTACCCTAATCCCGTACTGCAGCGTTGCAAGCGAGTCCAGTCTCGATTACCCCCGTGAATCGAAGGGAAGAATTTAATACAACGCTCTTCCTCTGTTTCGTTTGCATCAACTGGACCCGGACCGGGTTGCTGGAATCGTTGATGGGCCCCTACGGCCCGTCTACCTCGCTACATTCCTGATCTCGGGTTCGGATTTCCACCTGAAACAAGGGGGTGACTGTACGACGG
CTGTAGGGCCCTCCAGCACCGCGGGGTGCATCTGAGCGTACTACTGACTGAATTCACTTAAGCTTATGTCAGACATATCTATAAACCAACAACAGTGAGTTATCAGGAGGGATGTGAAAGTATGTCTCTCATTAATCCGATATGTAGGGTGGTCCATGGCAACGATTGGCTCGATCCGGCCGTGGTCCCCCACCCCTTTGTTTCAACTGGAGAGTGCCGAGGGTGCGGTGTCCCGGAGCAGTTCGATCGGTCAATCGGACCCCTTTCCTTCGAGTCGAGCCGAAAAGAGAGGGTCTCTCCGGACGGAATCGGGCGGACCCAGCGGTTCTAGTAACTCGAGGTGCTCTAGATCGCGAATCTAGTTGAAACTAGTAACTAGCTGCAACAGCCCTAGTAAAGTCCTAGATTTGCTAGTCGTTCGGATATTGTTTTTCAGGCAGTCACCTAAAGCTTCTCCTTCTAGAGACACCTTCTCCCCACCCACCCCTTCTTCAGGCCGTTCCACCTGAAACGAAGGGGTGGGGGGCTTCCGATGATCATCGTCGATCTTCCAAACTGATCACGAGTCACGATATCGAGGCCCACTATTCATCAGAATCCTGTTCTATCTTTCCAGACACTGTTCGACGATATCATATCGTCCGGTCTACCGGCTTCCAGAACGATGTGCCAGGGCGTTCGCCGACCGCCTAATCCATCATTAGGTCACACGGGCATAGCAGCAGGGTACCCTAATCCCGTACTGCAGCGTTGCAAGCGAGTCCAGTCTCGATTACCCCCGTGAATCGAAGGGAAGAATTTAATACAACGCTCTTCCTCTGTTTCGTTTGCATCAACTGGACCCGGACCGGGTTGCTGGAATCGTTGATGGGCCCCTACGGCCCGTCTACCTCGCTACATTCCTGATCTCGGGTTCGGATTTCCACCTGAAACAAGGGGGTGACTGTACGACGG
ORB     AT-rich region
The information of repeat sequences

Motif TCCASCTGAAACGARGGGGT

StartP-valueSite
5012.36e-12TTCAGGCCGTTCCACCTGAAACGAAGGGGTGGGGGGCTTC
9228.33e-12GGTTCGGATTTCCACCTGAAACAAGGGGGTGACTGTACGA
2754.54e-09TTCCTTCGAGTCGAGCCGAAAAGAGAGGGTCTCTCCGGAC
3584.95e-08AGATCGCGAATCTAGTTGAAACTAGTAACTAGCTGCAACA
7765.12e-08GTCTCGATTACCCCCGTGAATCGAAGGGAAGAATTTAATA

Motif TTTGYWTCAACTGGA

StartP-valueSite
8272.20e-09CTCTGTTTCGTTTGCATCAACTGGACCCGGACCGG
1972.20e-09CCCCCACCCCTTTGTTTCAACTGGAGAGTGCCGAG

Motif TAGTAA

StartP-valueSite
3921.68e-04GCAACAGCCCTAGTAAAGTCCTAGAT
3291.68e-04CCAGCGGTTCTAGTAACTCGAGGTGC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010171 100.0 954 0 0 1 954 1 954 0.0 1762
aORI10010160 81.768 181 21 11 779 953 1258 1432 7.22e-35 141
aORI10010160 94.366 71 4 0 1 71 1 71 2.04e-25 110
aORI10010219 79.29 169 29 6 788 954 73 237 1.57e-26 113
aORI10010315 78.09 178 28 10 782 954 1247 1418 3.41e-23 102
aORI10010315 90.411 73 7 0 6 78 7 79 1.58e-21 97
aORI10010150 77.907 172 27 9 788 954 1240 1405 1.58e-21 97
aORI10010150 74.879 207 41 9 327 528 603 803 1.23e-17 84
aORI10010201 89.855 69 7 0 6 74 1082 1014 2.65e-19 90
aORI10010201 90.909 66 3 3 782 846 185 122 3.43e-18 86
aORI10010393 88.06 67 7 1 778 844 176 111 5.74e-16 79
aORI10010393 88.889 54 3 3 479 530 719 667 1.61e-11 64
aORI10010216 92.157 51 1 2 475 525 499 452 3.45e-13 69
aORI10010162 90.196 51 2 1 475 525 244 197 1.61e-11 64
aORI10010237 100.0 32 0 0 814 845 1103 1134 2.08e-10 60
aORI10010313 100.0 31 0 0 498 528 251 221 7.48e-10 58
aORI10010275 97.059 34 0 1 497 530 622 654 2.69e-09 57