RefSeq NZ_CP007060.1
DoriC accession number aORI10010275
OriC length 1140 nt
OriC AT content 0.5526
The location of oriC region 2846893..1064 nt
Browse in NCBI
OriC map
OriC sequences
CCTTGGCCTCCATTCGCACCCCGCCCCTTGTATGTTTGACGCAGGATACGGATAGTAACGAGTAGCTACCGTCGCGGAGACTTAAACTTACGGTCCAGACGGCGTCGACGTTGCGGACCGAGCGGCGTCGAGGATTTCGACGAGCGAACTGTCGAGCGAGGGCAGGAAGGAACTGAGCGGCCTCGACAGCTGGGCCGGCTCTACGAGGAGAAGGGGGAGAGGAATCGAGCGAAGAAAGTGGTGATTGGTAACCATGAACAGGCCACGTCAGGGCGATAGATTAGTGAGAACAGCCGGAAGAAGAGCGGTTCGCGGAGTGCTCGCGACCGATAGGCTGGAATCGAGCGGTTCGCCTGAGGAGGAACTGGTTCCACAGGACCGGTAGACAAGAACGAGAGGGAAGTCTGCAGGGAATCCCCCACCCCTTCGTTTCGACTGGAACGGTGAGAGGGACCAGTCCAGCAAACCGATCAGCCGGGAATCCACGCCAAACCCAACTAGAACTAGACCTTTGCAGCCCTACAATTGGATATGTTCTCTGTATTACGGATATTGTTTTTCGGGTAGGTACTTAGTTCTTCCCTAGGCTAGACGTCGTCTGTTGTGCCCACTCCTCTTTCTCCGTTCCACCTGAAACGAAGGGGTGGGGGGTTCGGCCACATCTCGGCGTTCGACCCCCTGGTTTCCGATGGAACGACCAGTCGACCAGTCTCAGAATTCCAGCTTCGTACGGTCGGGCTACTCCAAAGATCGGGAGCAGATCGAAGAATCGGTAGGTCCTGCAACAGGCTGATACTGCACCGATGAAGTCGTAGTTTGGTCGAACAAATTAACCGCCATGTAGCGATTTTCGTTATCAGATCTCTGCCTTATCCCGAGGAGCGGGCAACGTCCTTGTCAGTTCCTTACATGCTATGGATCGTGTCGAAACTGCTACACGGAGTACGGTCGACCTACAATCTGACCGCTCCAATTAGCATCATCGAAACTTATTAGTCTCTCCTGTTTCCATTGGTTCATCTGCATCAACTGGAGCGTCTGTCGGGAAGCTGTCGCGGAACGCCGCAGTAACGGTCGTTTCCGGGCCGCTGTCTGGTGACGGCGCTCTCCACACGAAACGAAGGGGTATCCAATCGACAC
CCTTGGCCTCCATTCGCACCCCGCCCCTTGTATGTTTGACGCAGGATACGGATAGTAACGAGTAGCTACCGTCGCGGAGACTTAAACTTACGGTCCAGACGGCGTCGACGTTGCGGACCGAGCGGCGTCGAGGATTTCGACGAGCGAACTGTCGAGCGAGGGCAGGAAGGAACTGAGCGGCCTCGACAGCTGGGCCGGCTCTACGAGGAGAAGGGGGAGAGGAATCGAGCGAAGAAAGTGGTGATTGGTAACCATGAACAGGCCACGTCAGGGCGATAGATTAGTGAGAACAGCCGGAAGAAGAGCGGTTCGCGGAGTGCTCGCGACCGATAGGCTGGAATCGAGCGGTTCGCCTGAGGAGGAACTGGTTCCACAGGACCGGTAGACAAGAACGAGAGGGAAGTCTGCAGGGAATCCCCCACCCCTTCGTTTCGACTGGAACGGTGAGAGGGACCAGTCCAGCAAACCGATCAGCCGGGAATCCACGCCAAACCCAACTAGAACTAGACCTTTGCAGCCCTACAATTGGATATGTTCTCTGTATTACGGATATTGTTTTTCGGGTAGGTACTTAGTTCTTCCCTAGGCTAGACGTCGTCTGTTGTGCCCACTCCTCTTTCTCCGTTCCACCTGAAACGAAGGGGTGGGGGGTTCGGCCACATCTCGGCGTTCGACCCCCTGGTTTCCGATGGAACGACCAGTCGACCAGTCTCAGAATTCCAGCTTCGTACGGTCGGGCTACTCCAAAGATCGGGAGCAGATCGAAGAATCGGTAGGTCCTGCAACAGGCTGATACTGCACCGATGAAGTCGTAGTTTGGTCGAACAAATTAACCGCCATGTAGCGATTTTCGTTATCAGATCTCTGCCTTATCCCGAGGAGCGGGCAACGTCCTTGTCAGTTCCTTACATGCTATGGATCGTGTCGAAACTGCTACACGGAGTACGGTCGACCTACAATCTGACCGCTCCAATTAGCATCATCGAAACTTATTAGTCTCTCCTGTTTCCATTGGTTCATCTGCATCAACTGGAGCGTCTGTCGGGAAGCTGTCGCGGAACGCCGCAGTAACGGTCGTTTCCGGGCCGCTGTCTGGTGACGGCGCTCTCCACACGAAACGAAGGGGTATCCAATCGACAC
CCTTGGCCTCCATTCGCACCCCGCCCCTTGTATGTTTGACGCAGGATACGGATAGTAACGAGTAGCTACCGTCGCGGAGACTTAAACTTACGGTCCAGACGGCGTCGACGTTGCGGACCGAGCGGCGTCGAGGATTTCGACGAGCGAACTGTCGAGCGAGGGCAGGAAGGAACTGAGCGGCCTCGACAGCTGGGCCGGCTCTACGAGGAGAAGGGGGAGAGGAATCGAGCGAAGAAAGTGGTGATTGGTAACCATGAACAGGCCACGTCAGGGCGATAGATTAGTGAGAACAGCCGGAAGAAGAGCGGTTCGCGGAGTGCTCGCGACCGATAGGCTGGAATCGAGCGGTTCGCCTGAGGAGGAACTGGTTCCACAGGACCGGTAGACAAGAACGAGAGGGAAGTCTGCAGGGAATCCCCCACCCCTTCGTTTCGACTGGAACGGTGAGAGGGACCAGTCCAGCAAACCGATCAGCCGGGAATCCACGCCAAACCCAACTAGAACTAGACCTTTGCAGCCCTACAATTGGATATGTTCTCTGTATTACGGATATTGTTTTTCGGGTAGGTACTTAGTTCTTCCCTAGGCTAGACGTCGTCTGTTGTGCCCACTCCTCTTTCTCCGTTCCACCTGAAACGAAGGGGTGGGGGGTTCGGCCACATCTCGGCGTTCGACCCCCTGGTTTCCGATGGAACGACCAGTCGACCAGTCTCAGAATTCCAGCTTCGTACGGTCGGGCTACTCCAAAGATCGGGAGCAGATCGAAGAATCGGTAGGTCCTGCAACAGGCTGATACTGCACCGATGAAGTCGTAGTTTGGTCGAACAAATTAACCGCCATGTAGCGATTTTCGTTATCAGATCTCTGCCTTATCCCGAGGAGCGGGCAACGTCCTTGTCAGTTCCTTACATGCTATGGATCGTGTCGAAACTGCTACACGGAGTACGGTCGACCTACAATCTGACCGCTCCAATTAGCATCATCGAAACTTATTAGTCTCTCCTGTTTCCATTGGTTCATCTGCATCAACTGGAGCGTCTGTCGGGAAGCTGTCGCGGAACGCCGCAGTAACGGTCGTTTCCGGGCCGCTGTCTGGTGACGGCGCTCTCCACACGAAACGAAGGGGTATCCAATCGACAC
ORB     AT-rich region
The information of repeat sequences

Motif GTTTCVACTGGAACG

StartP-valueSite
4292.70e-09CCACCCCTTCGTTTCGACTGGAACGGTGAGAGGGA
6828.45e-08CGACCCCCTGGTTTCCGATGGAACGACCAGTCGAC
6243.26e-07CTCTTTCTCCGTTCCACCTGAAACGAAGGGGTGGG
10233.68e-07TGGTTCATCTGCATCAACTGGAGCGTCTGTCGGGA
3674.49e-07AGGAGGAACTGGTTCCACAGGACCGGTAGACAAGA

Motif AHNKTCBTTDTCRGDTCBBTRCHTDVT

StartP-valueSite
8471.71e-12CCATGTAGCGATTTTCGTTATCAGATCTCTGCCTTATCCCGAGGAGC
5503.39e-11TGTATTACGGATATTGTTTTTCGGGTAGGTACTTAGTTCTTCCCTAG
10719.91e-11CGCCGCAGTAACGGTCGTTTCCGGGCCGCTGTCTGGTGACGGCGCTC
8881.06e-10AGGAGCGGGCAACGTCCTTGTCAGTTCCTTACATGCTATGGATCGTG

Motif CSTMCRDTCKGACCNCTCCHMTK

StartP-valueSite
9533.97e-12GTACGGTCGACCTACAATCTGACCGCTCCAATTAGCATCATCG
71.65e-09CCTTGGCCTCCATTCGCACCCCGCCCCTTGTATGTTTGA
5962.54e-09GGCTAGACGTCGTCTGTTGTGCCCACTCCTCTTTCTCCGTTCC
7271.05e-08ATTCCAGCTTCGTACGGTCGGGCTACTCCAAAGATCGGGAGCA
5191.39e-08CCTTTGCAGCCCTACAATTGGATATGTTCTCTGTATTACGGAT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010275 100.0 1140 0 0 1 1140 1 1140 0.0 2106
aORI10010171 97.059 34 0 1 622 654 497 530 3.22e-09 57
aORI10010372 100.0 29 0 0 626 654 873 845 1.16e-08 55
aORI10010313 100.0 29 0 0 623 651 251 223 1.16e-08 55
aORI10010216 100.0 29 0 0 622 650 480 452 1.16e-08 55
aORI10010162 96.97 33 0 1 622 653 225 193 1.16e-08 55
aORI10010150 100.0 29 0 0 623 651 773 801 1.16e-08 55
aORI10010082 100.0 28 0 0 416 443 264 291 4.16e-08 53