RefSeq NZ_CP015127
DoriC accession number pORI00000811
OriC length 532 nt
OriC AT content 0.6184
The location of oriC region 1561..143 nt
Browse in NCBI
OriC map
OriC sequences
GGCTCTTGGGTTGAGTAAAGTCAGTCAACTCCTTAAAGCCTCAAAAAGGGACTAACTGCTAAAGCAGTAAGTCCCTTTAATTCGATTTACCGTTGACAGACAGTTAGATAGCTCACTGTTAGCTAAAATCGCTTAGAACGCAAATAAGAGCCTTTAAAATTAACGTTCAAAAATAAAAAAGTTCGAAGGAGCTAGCGACTGAACTTATTTATTTTTGAATGTTCCAAACTGACGCAAGTCAGTTTTGTTTGAGCAAAGCGAAATCTGATACAGGTTTTGATGGGTTTAGCACAACACAACTTCATGTTGTGTGTAAGTGCGCATTACATGATAGTGCGCATTACATGATAGTGCGCATTACATGATAGTGCGCATTACATGATAGTGCGTACATGATAATGTACATGATAATGCGCACTTACACTCCAAATAAATTGGAGTAATGCTAAAACCTGTATCAGAAGTCAGCAAGCTGACAACAAAAAAGGGATATGCCAACGGATTTACCGTTGATCATATCCTGACATTCTCT
GGCTCTTGGGTTGAGTAAAGTCAGTCAACTCCTTAAAGCCTCAAAAAGGGACTAACTGCTAAAGCAGTAAGTCCCTTTAATTCGATTTACCGTTGACAGACAGTTAGATAGCTCACTGTTAGCTAAAATCGCTTAGAACGCAAATAAGAGCCTTTAAAATTAACGTTCAAAAATAAAAAAGTTCGAAGGAGCTAGCGACTGAACTTATTTATTTTTGAATGTTCCAAACTGACGCAAGTCAGTTTTGTTTGAGCAAAGCGAAATCTGATACAGGTTTTGATGGGTTTAGCACAACACAACTTCATGTTGTGTGTAAGTGCGCATTACATGATAGTGCGCATTACATGATAGTGCGCATTACATGATAGTGCGCATTACATGATAGTGCGTACATGATAATGTACATGATAATGCGCACTTACACTCCAAATAAATTGGAGTAATGCTAAAACCTGTATCAGAAGTCAGCAAGCTGACAACAAAAAAGGGATATGCCAACGGATTTACCGTTGATCATATCCTGACATTCTCT
AT-rich region
The information of repeat sequences

Motif TACATGATAGTGCGC

StartP-valueSite
3597.90e-10TAGTGCGCATTACATGATAGTGCGCATTACATGAT
3427.90e-10TAGTGCGCATTACATGATAGTGCGCATTACATGAT
3257.90e-10AAGTGCGCATTACATGATAGTGCGCATTACATGAT
3762.01e-09TAGTGCGCATTACATGATAGTGCGTACATGATAAT
4023.34e-09CATGATAATGTACATGATAATGCGCACTTACACTC

Motif ATTTAHYGTTG

StartP-valueSite
5022.70e-07ATGCCAACGGATTTACCGTTGATCATATCCT
852.70e-07CTTTAATTCGATTTACCGTTGACAGACAGTT
2991.75e-05GCACAACACAACTTCATGTTGTGTGTAAGTG
1582.16e-05GAGCCTTTAAAATTAACGTTCAAAAATAAAA
2072.99e-05GACTGAACTTATTTATTTTTGAATGTTCCAA

Motif AAGTCMGY

StartP-valueSite
4625.62e-05CCTGTATCAGAAGTCAGCAAGCTGACAA
2365.62e-05AAACTGACGCAAGTCAGTTTTGTTTGAG
185.62e-05GGGTTGAGTAAAGTCAGTCAACTCCTTA
697.44e-05CTAAAGCAGTAAGTCCCTTTAATTCGAT
3151.29e-04TGTTGTGTGTAAGTGCGCATTACATGAT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000811 100.0 532 0 0 1 532 1 532 0.0 983
pORI00000963 95.332 557 1 4 1 532 1 557 0.0 861
pORI00000963 93.846 65 3 1 316 379 384 448 2.99e-21 97
pORI00000963 94.231 52 0 2 350 398 316 367 3.89e-15 77
pORI00000963 93.75 48 2 1 316 362 401 448 1.81e-13 71
pORI00000751 94.664 431 14 3 1 423 656 227 0.0 660
pORI00000751 91.518 224 13 4 314 532 223 1 0.0 303
pORI00000460 91.283 413 21 9 25 423 658 247 0.0 549
pORI00000460 92.07 227 9 4 314 532 226 1 0.0 311
pORI00000042 91.283 413 21 9 25 423 658 247 0.0 549
pORI00000042 92.07 227 9 4 314 532 226 1 0.0 311
pORI00000368 90.191 418 21 9 25 423 609 193 0.0 527
pORI00000368 90.0 230 7 7 314 532 225 1 0.0 283
pORI00000649 92.5 320 11 4 116 423 1 319 0.0 446
pORI00000649 90.0 230 7 7 314 532 287 511 0.0 283
pORI00000068 88.288 333 25 12 25 345 434 104 0.0 387
pORI00000068 96.0 50 2 0 404 453 123 74 8.37e-17 82
pORI00000444 97.235 217 4 1 316 532 215 1 0.0 366
pORI00000444 100.0 76 0 0 316 391 283 208 1.36e-34 141
pORI00000444 89.655 116 3 3 316 423 266 152 4.9e-34 139
pORI00000444 88.0 100 3 4 332 423 284 186 3.84e-25 110
pORI00000444 85.542 83 3 4 349 423 284 203 1.08e-15 79
pORI00000444 83.333 72 4 6 316 379 181 110 3.92e-10 60
pORI00000265 78.8 250 41 10 82 325 407 164 1.35e-39 158
pORI00000197 85.811 148 14 5 1 141 181 34 2.26e-37 150
pORI00000183 98.795 83 1 0 19 101 139 57 8.14e-37 148
pORI00000174 95.238 84 3 1 19 101 140 57 8.19e-32 132
pORI00000250 79.699 133 13 5 413 532 132 1 2.33e-17 84
pORI00000391 92.308 52 3 1 402 452 110 59 5.04e-14 73