RefSeq NC_003893
DoriC accession number pORI00000368
OriC length 1107 nt
OriC AT content 0.6007
The location of oriC region 1568..613 nt
Browse in NCBI
OriC map
OriC sequences
AGAGAATGTCAGGATATGATCAACGGTAAATCCGTTGGCATATCCCTTTTTTGTTGTCAGCTTGCTGACTTCTGATACAGGTTTTAGCATTACTCCAATTTATTTGGAGTGTAAGTGCACATTATCATGTAGTGCGCATTATCATGTAGTGCGCATTATCATGTAGTGCGCACATTATCATGTACATTATCATGTAGTGCGCATTATCATGTAGTGCGCACATTATCATGTAGTGCGCATTATCATGTAGTGCGCACATTATCATGTAGTGCGCATTATCATGTAGTGCGCATTATCATGTAGTGCGCACTTACACACAACATGAAGTTGTGTTGTGCTAAACCCATCAAAACCTGCATCAGATTTCGCGTTGCTCAAACGTAACTGACTTGCGTCAGTTTGGAACATTCAAAAATAAATAAGTTCAGTCGCTAGCTCCTTCGAACTTTTTTATTTTTGAACGTTAATTTTAAAGGCTCTTATTTGCGTTCTAAGCGATTTTAGCTAACAGTTAGCTATCTAACTGTCTGTCAACGGTAAATCGACTTAGAGGGGCTTATTGAGCCTTACAGGCGATATTAGCCCCTCTTGGAGGCTTTAAGGAGTTGATAGACTAGACAATACCAAAAGCCTGACGTCTTGGAAAACAAGCCCTTGTTTTCCCGAGCCCAGCGGCGGCAAGCGTTACGGTCCAGCTGGTTCAGCTGGTCAGTGTGGCTGAAAGCCACGGTTTAAAAAAAGCAGTTCAGCGGTTTTTGCTGATCTGCTTTTTGGGGTTTAAAAACGCCAATTTTTGGCGTTTTCTTCTTATCTTGATACTATTAGCAACAACTAGTTTTTTAAAATCAAGCTTGATTAGGCTTAATTGGGCTTGTATCCATTGATTTTATAGGCTTTTGGTGTATTATTAGGGTTATAAATTGGTTGAAAGAAAGACAAAATAAAAACCCACGTGCAATTCCTAGTTTGGCCGCTCGGAACACGTGAGTTGATTATCATTTGCGATTTATAGCCTATTCTAGGGGAAAAGCCCTATGATGTCAAGGTTATAAGCTTATTGAAAAAGATAGTCAGCTCCTTCACGTGGATAAACTGGAGGAGCTTTTT
AGAGAATGTCAGGATATGATCAACGGTAAATCCGTTGGCATATCCCTTTTTTGTTGTCAGCTTGCTGACTTCTGATACAGGTTTTAGCATTACTCCAATTTATTTGGAGTGTAAGTGCACATTATCATGTAGTGCGCATTATCATGTAGTGCGCATTATCATGTAGTGCGCACATTATCATGTACATTATCATGTAGTGCGCATTATCATGTAGTGCGCACATTATCATGTAGTGCGCATTATCATGTAGTGCGCACATTATCATGTAGTGCGCATTATCATGTAGTGCGCATTATCATGTAGTGCGCACTTACACACAACATGAAGTTGTGTTGTGCTAAACCCATCAAAACCTGCATCAGATTTCGCGTTGCTCAAACGTAACTGACTTGCGTCAGTTTGGAACATTCAAAAATAAATAAGTTCAGTCGCTAGCTCCTTCGAACTTTTTTATTTTTGAACGTTAATTTTAAAGGCTCTTATTTGCGTTCTAAGCGATTTTAGCTAACAGTTAGCTATCTAACTGTCTGTCAACGGTAAATCGACTTAGAGGGGCTTATTGAGCCTTACAGGCGATATTAGCCCCTCTTGGAGGCTTTAAGGAGTTGATAGACTAGACAATACCAAAAGCCTGACGTCTTGGAAAACAAGCCCTTGTTTTCCCGAGCCCAGCGGCGGCAAGCGTTACGGTCCAGCTGGTTCAGCTGGTCAGTGTGGCTGAAAGCCACGGTTTAAAAAAAGCAGTTCAGCGGTTTTTGCTGATCTGCTTTTTGGGGTTTAAAAACGCCAATTTTTGGCGTTTTCTTCTTATCTTGATACTATTAGCAACAACTAGTTTTTTAAAATCAAGCTTGATTAGGCTTAATTGGGCTTGTATCCATTGATTTTATAGGCTTTTGGTGTATTATTAGGGTTATAAATTGGTTGAAAGAAAGACAAAATAAAAACCCACGTGCAATTCCTAGTTTGGCCGCTCGGAACACGTGAGTTGATTATCATTTGCGATTTATAGCCTATTCTAGGGGAAAAGCCCTATGATGTCAAGGTTATAAGCTTATTGAAAAAGATAGTCAGCTCCTTCACGTGGATAAACTGGAGGAGCTTTTT
AT-rich region
The information of repeat sequences

Motif TGTAGTGCGCATTATCATGTAGTGCGCAC

StartP-valueSite
2823.17e-18CGCATTATCATGTAGTGCGCATTATCATGTAGTGCGCACTTACACACAA
2293.17e-18CACATTATCATGTAGTGCGCATTATCATGTAGTGCGCACATTATCATGT
1933.17e-18TACATTATCATGTAGTGCGCATTATCATGTAGTGCGCACATTATCATGT
1453.17e-18CGCATTATCATGTAGTGCGCATTATCATGTAGTGCGCACATTATCATGT
1112.71e-16TATTTGGAGTGTAAGTGCACATTATCATGTAGTGCGCATTATCATGTAG

Motif AGCBGCTYWTTGDGGCTTAAAGVCG

StartP-valueSite
5514.41e-12ATCGACTTAGAGGGGCTTATTGAGCCTTACAGGCGATATTAGCCC
5811.53e-11AGGCGATATTAGCCCCTCTTGGAGGCTTTAAGGAGTTGATAGACT
7033.11e-11CAGCTGGTTCAGCTGGTCAGTGTGGCTGAAAGCCACGGTTTAAAA
7621.31e-10GTTTTTGCTGATCTGCTTTTTGGGGTTTAAAAACGCCAATTTTTG

Motif TCAAMVGTAAAT

StartP-valueSite
5318.08e-08TAACTGTCTGTCAACGGTAAATCGACTTAGAG
208.08e-08CAGGATATGATCAACGGTAAATCCGTTGGCAT
3751.05e-06TTCGCGTTGCTCAAACGTAACTGACTTGCGTC
4092.06e-06TTTGGAACATTCAAAAATAAATAAGTTCAGTC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000368 100.0 1107 0 0 1 1107 1 1107 0.0 2045
pORI00000368 90.132 152 0 5 170 313 117 261 0.0 183
pORI00000368 90.132 152 0 5 117 261 170 313 0.0 183
pORI00000368 91.87 123 1 4 193 313 110 225 6.15997e-41 163
pORI00000368 91.87 123 1 4 110 225 193 313 6.15997e-41 163
pORI00000368 89.051 137 1 5 181 313 116 242 2.86e-39 158
pORI00000368 89.051 137 1 5 116 242 181 313 2.86e-39 158
pORI00000368 89.796 98 0 4 218 313 117 206 4.86e-27 117
pORI00000368 89.796 98 0 4 117 206 218 313 4.86e-27 117
pORI00000368 98.361 61 0 1 254 313 117 177 1.05e-23 106
pORI00000368 98.361 61 0 1 117 177 254 313 1.05e-23 106
pORI00000368 92.208 77 1 3 229 302 110 184 3.78e-23 104
pORI00000368 92.208 77 1 3 110 184 229 302 3.78e-23 104
pORI00000368 94.0 50 1 2 265 313 110 158 2.97e-14 75
pORI00000368 94.0 50 1 2 110 158 265 313 2.97e-14 75
pORI00000042 95.678 1157 0 4 1 1107 1 1157 0.0 1814
pORI00000042 97.059 170 1 3 110 278 196 362 0.0 283
pORI00000042 93.333 150 0 4 170 313 117 262 0.0 213
pORI00000042 95.489 133 1 3 181 313 116 243 0.0 207
pORI00000042 94.262 122 1 4 193 313 110 226 0.0 182
pORI00000042 96.875 96 0 2 218 313 117 209 2.86e-39 158
pORI00000042 90.351 114 0 3 117 225 255 362 1.04e-33 139
pORI00000042 85.315 143 1 9 110 242 230 362 6.24e-31 130
pORI00000042 94.186 86 1 3 229 313 110 192 2.25e-30 128
pORI00000042 88.889 99 1 4 116 206 266 362 6.29e-26 113
pORI00000042 98.361 61 0 1 117 177 303 362 1.05e-23 106
pORI00000042 98.333 60 0 1 254 313 117 175 3.78e-23 104
pORI00000042 92.208 77 1 3 110 184 278 351 3.78e-23 104
pORI00000042 94.0 50 1 2 265 313 110 158 2.97e-14 75
pORI00000042 94.0 50 1 2 110 158 314 362 2.97e-14 75
pORI00000460 93.029 1162 19 15 1 1107 1 1155 0.0 1640
pORI00000460 97.059 170 1 3 110 278 196 362 0.0 283
pORI00000460 93.333 150 0 4 170 313 117 262 0.0 213
pORI00000460 95.489 133 1 3 181 313 116 243 0.0 207
pORI00000460 94.262 122 1 4 193 313 110 226 0.0 182
pORI00000460 96.875 96 0 2 218 313 117 209 2.86e-39 158
pORI00000460 90.351 114 0 3 117 225 255 362 1.04e-33 139
pORI00000460 85.315 143 1 9 110 242 230 362 6.24e-31 130
pORI00000460 94.186 86 1 3 229 313 110 192 2.25e-30 128
pORI00000460 88.889 99 1 4 116 206 266 362 6.29e-26 113
pORI00000460 98.361 61 0 1 117 177 303 362 1.05e-23 106
pORI00000460 98.333 60 0 1 254 313 117 175 3.78e-23 104
pORI00000460 92.208 77 1 3 110 184 278 351 3.78e-23 104
pORI00000460 94.0 50 1 2 265 313 110 158 2.97e-14 75
pORI00000460 94.0 50 1 2 110 158 314 362 2.97e-14 75
pORI00000649 100.0 511 0 0 1 511 511 1 0.0 944
pORI00000649 90.132 152 0 5 117 261 342 199 0.0 183
pORI00000649 90.132 152 0 5 170 313 395 251 0.0 183
pORI00000649 91.87 123 1 4 110 225 319 199 6.15997e-41 163
pORI00000649 91.87 123 1 4 193 313 402 287 6.15997e-41 163
pORI00000649 89.552 134 0 5 119 242 328 199 2.86e-39 158
pORI00000649 89.552 134 0 5 184 313 393 270 2.86e-39 158
pORI00000649 89.796 98 0 4 117 206 294 199 4.86e-27 117
pORI00000649 89.796 98 0 4 218 313 395 306 4.86e-27 117
pORI00000649 98.361 61 0 1 117 177 258 199 1.05e-23 106
pORI00000649 98.361 61 0 1 254 313 395 335 1.05e-23 106
pORI00000649 92.208 77 1 3 110 184 283 210 3.78e-23 104
pORI00000649 92.208 77 1 3 229 302 402 328 3.78e-23 104
pORI00000649 94.0 50 1 2 110 158 247 199 2.97e-14 75
pORI00000649 94.0 50 1 2 265 313 402 354 2.97e-14 75
pORI00000751 89.612 645 18 12 1 609 1 632 0.0 774
pORI00000751 89.714 175 5 6 110 278 176 343 0.0 211
pORI00000751 89.809 157 5 5 110 261 193 343 0.0 191
pORI00000751 94.393 107 4 1 202 308 132 236 6.15997e-41 163
pORI00000751 88.489 139 5 5 110 242 210 343 2.86e-39 158
pORI00000751 89.256 121 4 4 110 225 227 343 8.02e-35 143
pORI00000751 86.29 124 4 5 193 313 110 223 1.04e-28 122
pORI00000751 88.35 103 3 5 110 206 244 343 1.75e-26 115
pORI00000751 93.333 75 2 2 110 184 261 332 2.93e-24 108
pORI00000751 94.118 68 2 2 110 177 278 343 1.36e-22 102
pORI00000068 90.234 512 34 14 282 779 104 613 0.0 654
pORI00000963 90.487 431 30 7 185 615 438 19 0.0 558
pORI00000963 90.726 248 13 5 1 242 557 314 0.0 322
pORI00000811 89.858 424 23 9 193 615 423 19 0.0 527
pORI00000811 90.0 230 7 7 1 225 532 314 0.0 283
pORI00000197 85.385 520 54 14 486 998 34 538 0.0 520
pORI00000004 91.005 378 20 13 737 1107 1 371 0.0 497
pORI00000444 88.215 297 14 8 1 292 1 281 0.0 335
pORI00000391 93.671 79 4 1 81 158 59 137 4.86e-27 117
pORI00000391 96.0 50 0 2 265 313 89 137 6.38e-16 81
pORI00000391 97.826 46 0 1 128 172 89 134 2.29e-15 79
pORI00000391 94.118 51 0 2 246 295 89 137 2.97e-14 75
pORI00000391 93.75 48 0 2 210 256 89 134 1.38e-12 69
pORI00000391 100.0 36 0 0 185 220 99 134 4.97e-12 68
pORI00000250 79.389 131 13 5 1 118 1 130 6.38e-16 81