RefSeq NZ_CP004408
DoriC accession number pORI00000649
OriC length 511 nt
OriC AT content 0.6145
The location of oriC region 1782..230 nt
Browse in NCBI
OriC map
OriC sequences
CTGTTAGCTAAAATCGCTTAGAACGCAAATAAGAGCCTTTAAAATTAACGTTCAAAAATAAAAAAGTTCGAAGGAGCTAGCGACTGAACTTATTTATTTTTGAATGTTCCAAACTGACGCAAGTCAGTTACGTTTGAGCAACGCGAAATCTGATGCAGGTTTTGATGGGTTTAGCACAACACAACTTCATGTTGTGTGTAAGTGCGCACTACATGATAATGCGCACTACATGATAATGCGCACTACATGATAATGTGCGCACTACATGATAATGCGCACTACATGATAATGTGCGCACTACATGATAATGCGCACTACATGATAATGTACATGATAATGTGCGCACTACATGATAATGCGCACTACATGATAATGCGCACTACATGATAATGTGCACTTACACTCCAAATAAATTGGAGTAATGCTAAAACCTGTATCAGAAGTCAGCAAGCTGACAACAAAAAAGGGATATGCCAACGGATTTACCGTTGATCATATCCTGACATTCTCT
CTGTTAGCTAAAATCGCTTAGAACGCAAATAAGAGCCTTTAAAATTAACGTTCAAAAATAAAAAAGTTCGAAGGAGCTAGCGACTGAACTTATTTATTTTTGAATGTTCCAAACTGACGCAAGTCAGTTACGTTTGAGCAACGCGAAATCTGATGCAGGTTTTGATGGGTTTAGCACAACACAACTTCATGTTGTGTGTAAGTGCGCACTACATGATAATGCGCACTACATGATAATGCGCACTACATGATAATGTGCGCACTACATGATAATGCGCACTACATGATAATGTGCGCACTACATGATAATGCGCACTACATGATAATGTACATGATAATGTGCGCACTACATGATAATGCGCACTACATGATAATGCGCACTACATGATAATGTGCACTTACACTCCAAATAAATTGGAGTAATGCTAAAACCTGTATCAGAAGTCAGCAAGCTGACAACAAAAAAGGGATATGCCAACGGATTTACCGTTGATCATATCCTGACATTCTCT
AT-rich region
The information of repeat sequences

Motif GTGCGCACTACATGATAATGCGCACTACA

StartP-valueSite
3392.70e-18ACATGATAATGTGCGCACTACATGATAATGCGCACTACATGATAATGCG
2912.70e-18ACATGATAATGTGCGCACTACATGATAATGCGCACTACATGATAATGTA
2552.70e-18ACATGATAATGTGCGCACTACATGATAATGCGCACTACATGATAATGTG
2022.70e-18TTGTGTGTAAGTGCGCACTACATGATAATGCGCACTACATGATAATGCG
3732.45e-16CTACATGATAATGCGCACTACATGATAATGTGCACTTACACTCCAAATA

Motif SAASKBAKTTAYBKTTGA

StartP-valueSite
4751.20e-09AGGGATATGCCAACGGATTTACCGTTGATCATATCCTG
1202.06e-09CAAACTGACGCAAGTCAGTTACGTTTGAGCAACGCGAA
861.03e-08GCTAGCGACTGAACTTATTTATTTTTGAATGTTCCAAA

Motif TGATAA

StartP-valueSite
3325.65e-04ATAATGTACATGATAATGTGCGCACT
3205.65e-04GCGCACTACATGATAATGTACATGAT
2845.65e-04GCGCACTACATGATAATGTGCGCACT
2485.65e-04GCGCACTACATGATAATGTGCGCACT
2315.65e-04GCGCACTACATGATAATGCGCACTAC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000649 100.0 511 0 0 1 511 1 511 0.0 944
pORI00000649 90.132 152 0 5 251 395 199 342 0.0 183
pORI00000649 90.132 152 0 5 199 342 251 395 0.0 183
pORI00000649 91.87 123 1 4 287 402 199 319 2.78999e-41 163
pORI00000649 91.87 123 1 4 199 319 287 402 2.78999e-41 163
pORI00000649 89.552 134 0 5 270 393 199 328 1.3e-39 158
pORI00000649 89.552 134 0 5 199 328 270 393 1.3e-39 158
pORI00000649 89.796 98 0 4 306 395 199 294 2.2e-27 117
pORI00000649 89.796 98 0 4 199 294 306 395 2.2e-27 117
pORI00000649 98.361 61 0 1 335 395 199 258 4.76e-24 106
pORI00000649 98.361 61 0 1 199 258 335 395 4.76e-24 106
pORI00000649 92.208 77 1 3 328 402 210 283 1.71e-23 104
pORI00000649 92.208 77 1 3 210 283 328 402 1.71e-23 104
pORI00000649 94.0 50 1 2 354 402 199 247 1.34e-14 75
pORI00000649 94.0 50 1 2 199 247 354 402 1.34e-14 75
pORI00000368 100.0 511 0 0 1 511 511 1 0.0 944
pORI00000368 90.132 152 0 5 199 342 261 117 0.0 183
pORI00000368 90.132 152 0 5 251 395 313 170 0.0 183
pORI00000368 91.87 123 1 4 199 319 225 110 2.78999e-41 163
pORI00000368 91.87 123 1 4 287 402 313 193 2.78999e-41 163
pORI00000368 89.051 137 1 5 199 331 242 116 1.3e-39 158
pORI00000368 89.051 137 1 5 270 396 313 181 1.3e-39 158
pORI00000368 89.796 98 0 4 199 294 206 117 2.2e-27 117
pORI00000368 89.796 98 0 4 306 395 313 218 2.2e-27 117
pORI00000368 98.361 61 0 1 199 258 177 117 4.76e-24 106
pORI00000368 98.361 61 0 1 335 395 313 254 4.76e-24 106
pORI00000368 92.208 77 1 3 210 283 184 110 1.71e-23 104
pORI00000368 92.208 77 1 3 328 402 302 229 1.71e-23 104
pORI00000368 94.0 50 1 2 199 247 158 110 1.34e-14 75
pORI00000368 94.0 50 1 2 354 402 313 265 1.34e-14 75
pORI00000460 91.25 560 0 3 1 511 560 1 0.0 717
pORI00000460 97.059 170 1 3 234 402 362 196 0.0 283
pORI00000460 93.333 150 0 4 199 342 262 117 0.0 213
pORI00000460 95.489 133 1 3 199 331 243 116 0.0 207
pORI00000460 94.262 122 1 4 199 319 226 110 0.0 182
pORI00000460 96.875 96 0 2 199 294 209 117 1.3e-39 158
pORI00000460 90.351 114 0 3 287 395 362 255 4.7e-34 139
pORI00000460 85.315 143 1 9 270 402 362 230 2.83e-31 130
pORI00000460 94.186 86 1 3 199 283 192 110 1.02e-30 128
pORI00000460 88.889 99 1 4 306 396 362 266 2.85e-26 113
pORI00000460 98.361 61 0 1 335 395 362 303 4.76e-24 106
pORI00000460 98.333 60 0 1 199 258 175 117 1.71e-23 104
pORI00000460 92.208 77 1 3 328 402 351 278 1.71e-23 104
pORI00000460 94.0 50 1 2 199 247 158 110 1.34e-14 75
pORI00000460 94.0 50 1 2 354 402 362 314 1.34e-14 75
pORI00000042 91.25 560 0 3 1 511 560 1 0.0 717
pORI00000042 97.059 170 1 3 234 402 362 196 0.0 283
pORI00000042 93.333 150 0 4 199 342 262 117 0.0 213
pORI00000042 95.489 133 1 3 199 331 243 116 0.0 207
pORI00000042 94.262 122 1 4 199 319 226 110 0.0 182
pORI00000042 96.875 96 0 2 199 294 209 117 1.3e-39 158
pORI00000042 90.351 114 0 3 287 395 362 255 4.7e-34 139
pORI00000042 85.315 143 1 9 270 402 362 230 2.83e-31 130
pORI00000042 94.186 86 1 3 199 283 192 110 1.02e-30 128
pORI00000042 88.889 99 1 4 306 396 362 266 2.85e-26 113
pORI00000042 98.361 61 0 1 335 395 362 303 4.76e-24 106
pORI00000042 98.333 60 0 1 199 258 175 117 1.71e-23 104
pORI00000042 92.208 77 1 3 328 402 351 278 1.71e-23 104
pORI00000042 94.0 50 1 2 199 247 158 110 1.34e-14 75
pORI00000042 94.0 50 1 2 354 402 362 314 1.34e-14 75
pORI00000751 90.859 547 8 7 1 511 541 1 0.0 695
pORI00000751 89.714 175 5 6 234 402 343 176 0.0 211
pORI00000751 89.809 157 5 5 251 402 343 193 0.0 191
pORI00000751 94.393 107 4 1 204 310 236 132 2.78999e-41 163
pORI00000751 88.489 139 5 5 270 402 343 210 1.3e-39 158
pORI00000751 89.256 121 4 4 287 402 343 227 3.63e-35 143
pORI00000751 86.29 124 4 5 199 319 223 110 4.73e-29 122
pORI00000751 88.35 103 3 5 306 402 343 244 7.91e-27 115
pORI00000751 93.333 75 2 2 328 402 332 261 1.32e-24 108
pORI00000751 94.118 68 2 2 335 402 343 278 6.16e-23 102
pORI00000963 93.272 327 18 2 1 327 116 438 0.0 479
pORI00000963 90.726 248 13 5 270 511 314 557 0.0 322
pORI00000811 92.5 320 11 4 1 319 116 423 0.0 446
pORI00000811 90.0 230 7 7 287 511 314 532 0.0 283
pORI00000444 88.215 297 14 8 220 511 281 1 0.0 335
pORI00000068 92.735 234 11 6 1 230 335 104 0.0 333
pORI00000391 93.671 79 4 1 354 431 137 59 2.2e-27 117
pORI00000391 96.0 50 0 2 199 247 137 89 2.89e-16 81
pORI00000391 97.826 46 0 1 340 384 134 89 1.04e-15 79
pORI00000391 94.118 51 0 2 217 266 137 89 1.34e-14 75
pORI00000391 93.75 48 0 2 256 302 134 89 6.25e-13 69
pORI00000391 100.0 36 0 0 292 327 134 99 2.25e-12 68
pORI00000250 79.389 131 13 5 394 511 130 1 2.89e-16 81