RefSeq NC_011136
DoriC accession number pORI00000444
OriC length 284 nt
OriC AT content 0.6232
The location of oriC region 1543..1826 nt
Browse in NCBI
OriC map
OriC sequences
AGAGAATGTCAGGATATGATCAACGGTAAATCCGTTGGCATATCCCTTTTTTGTTGTCAGCTTGCTGACTTCTGATACAGGTTTTAGCATTACTCCAATTTATTTGGAGTGTAAGTGCGCATTATCATGTACATTATCATGTACATTATCATGTAATGCGCACTATCATGTAATACGCACTATCATGTAATACGCACTATCATGTAATACGCACTATCATGTAATGCGCACTATCATGTAATGCGCACTATCATGTAATGCGCACTATCATGTAATGCGCACTA
AGAGAATGTCAGGATATGATCAACGGTAAATCCGTTGGCATATCCCTTTTTTGTTGTCAGCTTGCTGACTTCTGATACAGGTTTTAGCATTACTCCAATTTATTTGGAGTGTAAGTGCGCATTATCATGTACATTATCATGTACATTATCATGTAATGCGCACTATCATGTAATACGCACTATCATGTAATACGCACTATCATGTAATACGCACTATCATGTAATGCGCACTATCATGTAATGCGCACTATCATGTAATGCGCACTATCATGTAATGCGCACTA
AT-rich region
The information of repeat sequences

Motif GTAATGCGCACTATCATGTAATDCGCACT

StartP-valueSite
2552.92e-18GCACTATCATGTAATGCGCACTATCATGTAATGCGCACTA
2212.92e-18GCACTATCATGTAATGCGCACTATCATGTAATGCGCACTATCATGTAAT
1537.66e-18ACATTATCATGTAATGCGCACTATCATGTAATACGCACTATCATGTAAT
1871.23e-16GCACTATCATGTAATACGCACTATCATGTAATACGCACTATCATGTAAT
1125.20e-12ATTTGGAGTGTAAGTGCGCATTATCATGTACATTATCATGTACATTATC

Motif TGTCAG

StartP-valueSite
552.01e-04CCTTTTTTGTTGTCAGCTTGCTGACT
72.01e-04AGAGAATGTCAGGATATGATCA

Motif GGYAWATCC

StartP-valueSite
374.36e-06TAAATCCGTTGGCATATCCCTTTTTTGTT
257.72e-06TATGATCAACGGTAAATCCGTTGGCATAT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000444 100.0 284 0 0 1 284 1 284 0.0 525
pORI00000444 86.916 107 6 6 186 284 110 216 1.54e-26 113
pORI00000444 86.916 107 6 6 110 216 186 284 1.54e-26 113
pORI00000444 94.643 56 3 0 229 284 144 199 9.32e-19 88
pORI00000444 94.643 56 3 0 144 199 229 284 9.32e-19 88
pORI00000444 83.562 73 4 6 220 284 110 182 5.65e-11 62
pORI00000444 83.562 73 4 6 110 182 220 284 5.65e-11 62
pORI00000963 95.181 249 5 4 1 249 557 316 0.0 387
pORI00000963 97.744 133 2 1 152 283 448 316 0.0 228
pORI00000963 95.726 117 4 1 169 284 448 332 0.0 187
pORI00000963 94.0 100 5 1 186 284 448 349 1.17e-37 150
pORI00000963 93.976 83 4 1 203 284 448 366 7.11e-30 124
pORI00000963 100.0 57 0 0 210 266 372 316 2.57e-24 106
pORI00000963 93.939 66 3 1 220 284 448 383 4.31e-22 99
pORI00000963 96.154 52 2 0 147 198 367 316 3.35e-18 86
pORI00000963 93.878 49 2 1 237 284 448 400 2.61e-14 73
pORI00000963 97.143 35 1 0 147 181 350 316 2.03e-10 60
pORI00000811 97.235 217 4 1 1 215 532 316 0.0 366
pORI00000811 100.0 76 0 0 208 283 391 316 7.06e-35 141
pORI00000811 89.655 116 3 3 152 266 423 316 2.54e-34 139
pORI00000811 95.714 70 0 2 215 284 398 332 1.99e-25 110
pORI00000811 94.34 53 0 2 232 284 398 349 5.61e-16 79
pORI00000811 100.0 40 0 0 210 249 355 316 7.26e-15 75
pORI00000811 97.143 35 1 0 147 181 350 316 2.03e-10 60
pORI00000751 88.889 288 25 1 1 281 1 288 0.0 348
pORI00000460 89.855 276 19 6 1 274 1 269 0.0 346
pORI00000042 89.855 276 19 6 1 274 1 269 0.0 346
pORI00000649 88.0 300 15 8 1 284 511 217 0.0 335
pORI00000368 88.215 297 14 8 1 281 1 292 0.0 335
pORI00000250 79.699 133 13 5 1 120 1 132 1.21e-17 84
pORI00000068 96.0 50 2 0 80 129 74 123 4.34e-17 82
pORI00000391 92.308 52 3 1 81 131 59 110 2.61e-14 73