RefSeq NC_014164
DoriC accession number pORI00000197
OriC length 686 nt
OriC AT content 0.6093
The location of oriC region 3133..340 nt
Browse in NCBI
OriC map
OriC sequences
AATGCTCATATGGACTTAAAACGGCATTTAAGAGCTTTCTAAGCGATTTTAACTAGCAGTGGGCTATTTAACTGTCTGTCAACGGTAAATCGACGTAGAGGGGCTTATTGAGCCTTACAGGCGATGTTAGCCCCTCTTGGAGGCTTTAAGGAGTTGACTGACTTTACTCAACCCAAGAGCCTTATGTCCTAGGAAACAAGCCATTGTTTCCTCGAGCCCAGCGGCGGCAAGCGTTGCGCTCCAGCTGGCTCAGCTGGTCAGTGTGGCTGAAAGCCACGGTTTAAAAAAAGCAGTTCAGCGGTTTTTGCTGATCTGCTTTTTGGGGTTTAAAAACGCCAATTTTTGGCGTTTTCTTCTTATCTTGATACTAGTATGATCAACTAGTTTTTTATTTTTGCGAGTAATTTGTCCCTTATCATTGATTTTATGGGGTTTTGGTGTATTATTGGACATATAAAATTTAATAATAAAGAAGCGCAAAAAAAACCCACGTGCAAGTTCCTGATTTGGCCGTCCGGAACACGTGAGTTTGATTTCAAAGTTTTATTGCTTCAAAGCCTAGTATAACAGATGCTATAGGGACTTTGGAATAATTAGGTATATAATTTTTATGGTTGTCAAAATTATATAAGCAAAAACAGAAATCAAACTCCTTTTCACGTAGGTTAGAAAAGGAGCTTTTATAT
AATGCTCATATGGACTTAAAACGGCATTTAAGAGCTTTCTAAGCGATTTTAACTAGCAGTGGGCTATTTAACTGTCTGTCAACGGTAAATCGACGTAGAGGGGCTTATTGAGCCTTACAGGCGATGTTAGCCCCTCTTGGAGGCTTTAAGGAGTTGACTGACTTTACTCAACCCAAGAGCCTTATGTCCTAGGAAACAAGCCATTGTTTCCTCGAGCCCAGCGGCGGCAAGCGTTGCGCTCCAGCTGGCTCAGCTGGTCAGTGTGGCTGAAAGCCACGGTTTAAAAAAAGCAGTTCAGCGGTTTTTGCTGATCTGCTTTTTGGGGTTTAAAAACGCCAATTTTTGGCGTTTTCTTCTTATCTTGATACTAGTATGATCAACTAGTTTTTTATTTTTGCGAGTAATTTGTCCCTTATCATTGATTTTATGGGGTTTTGGTGTATTATTGGACATATAAAATTTAATAATAAAGAAGCGCAAAAAAAACCCACGTGCAAGTTCCTGATTTGGCCGTCCGGAACACGTGAGTTTGATTTCAAAGTTTTATTGCTTCAAAGCCTAGTATAACAGATGCTATAGGGACTTTGGAATAATTAGGTATATAATTTTTATGGTTGTCAAAATTATATAAGCAAAAACAGAAATCAAACTCCTTTTCACGTAGGTTAGAAAAGGAGCTTTTATAT
AT-rich region
The information of repeat sequences

Motif AGCBGCTYWTTGDGGCTTAAAGVCG

StartP-valueSite
994.52e-12ATCGACGTAGAGGGGCTTATTGAGCCTTACAGGCGATGTTAGCCC
1291.49e-11AGGCGATGTTAGCCCCTCTTGGAGGCTTTAAGGAGTTGACTGACT
2523.21e-11CAGCTGGCTCAGCTGGTCAGTGTGGCTGAAAGCCACGGTTTAAAA
3111.21e-10GTTTTTGCTGATCTGCTTTTTGGGGTTTAAAAACGCCAATTTTTG

Motif ARCCCAVSDGC

StartP-valueSite
4851.85e-07GCGCAAAAAAAACCCACGTGCAAGTTCCTGA
1705.78e-07GACTTTACTCAACCCAAGAGCCTTATGTCCT
2151.33e-06TGTTTCCTCGAGCCCAGCGGCGGCAAGCGTT

Motif AAAVAAGC

StartP-valueSite
4691.43e-05ATTTAATAATAAAGAAGCGCAAAAAAAA
1942.59e-05ATGTCCTAGGAAACAAGCCATTGTTTCC
6713.69e-05GTAGGTTAGAAAAGGAGCTTTTATAT
2845.55e-05CCACGGTTTAAAAAAAGCAGTTCAGCGG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000197 100.0 686 0 0 1 686 1 686 0.0 1267
pORI00000183 95.546 449 16 4 240 686 252 698 0.0 715
pORI00000174 99.407 337 1 1 350 686 328 663 0.0 610
pORI00000368 85.385 520 54 14 34 538 486 998 0.0 520
pORI00000042 85.385 520 55 13 34 538 535 1048 0.0 520
pORI00000460 84.57 512 55 17 34 530 535 1037 0.0 486
pORI00000068 82.06 301 43 9 38 328 314 613 0.0 246
pORI00000004 80.309 259 30 15 286 530 1 252 4.2039e-45 176
pORI00000963 86.207 145 13 5 37 181 138 1 2.94e-37 150
pORI00000811 86.207 145 13 5 37 181 138 1 2.94e-37 150
pORI00000751 85.811 148 14 5 34 181 516 656 2.94e-37 150
pORI00000265 88.0 50 4 2 65 114 379 426 1.83e-09 58