RefSeq NC_010242
DoriC accession number pORI00000174
OriC length 663 nt
OriC AT content 0.6018
The location of oriC region 1718..2380 nt
Browse in NCBI
OriC map
OriC sequences
ATTTGGTCTATGGCTTTAATTTAGCCGCTGATGAGTATTGGAGCTGTTTAATGGCCGTCAGTCAACGGGTAAATCGAATTAAAGGGACTTACTGCTTTAGCAGTTAGTCCCTTTTTGAGGCTTTAGGGAGTTGATTGACTAACCAAACCCAGACACTGAATTGGCTGAAAGCCAAAGTTTCCTAAACTTTGCTTTCCTGCCTCACGGCGAGTGCGGGGTGAGTTTGAGCGGGAGCTCCCGCTCAATTATGCGGTCAAGCTGGCACAGCTTGGACTGGGTTCGGGGCGTCAGCGCCCGAGGGCTTAGAAACTGGTCGATTTTGACCAGTTTCTTCTTATCTTGATACTAGTATGATCAACTAGTTTTTTATTTTTGCGAGTAATTTGTCCCTTATCATTGATTTTATGGGGTTTTGGTGTATTATTGGACATATAAAATTTAATAATAAAGAAGCGCAAAAAAAACCCACGTGCAAGTTCCTGATTTGGCCGTCCGGAACACGTGAGTTTGATTTCAAAGTTTTATTGCTTCAAAGCCTAGTATAACAGATGCTATAGGACTTTTGAATAATTAGGTATATAATTTTTATGGTTGTCAAAATTATATAAGCAAAAACAGAAATCAAACTCCTTTTCACGTAGGTTAGAAAAGGAGCTTTTATAT
ATTTGGTCTATGGCTTTAATTTAGCCGCTGATGAGTATTGGAGCTGTTTAATGGCCGTCAGTCAACGGGTAAATCGAATTAAAGGGACTTACTGCTTTAGCAGTTAGTCCCTTTTTGAGGCTTTAGGGAGTTGATTGACTAACCAAACCCAGACACTGAATTGGCTGAAAGCCAAAGTTTCCTAAACTTTGCTTTCCTGCCTCACGGCGAGTGCGGGGTGAGTTTGAGCGGGAGCTCCCGCTCAATTATGCGGTCAAGCTGGCACAGCTTGGACTGGGTTCGGGGCGTCAGCGCCCGAGGGCTTAGAAACTGGTCGATTTTGACCAGTTTCTTCTTATCTTGATACTAGTATGATCAACTAGTTTTTTATTTTTGCGAGTAATTTGTCCCTTATCATTGATTTTATGGGGTTTTGGTGTATTATTGGACATATAAAATTTAATAATAAAGAAGCGCAAAAAAAACCCACGTGCAAGTTCCTGATTTGGCCGTCCGGAACACGTGAGTTTGATTTCAAAGTTTTATTGCTTCAAAGCCTAGTATAACAGATGCTATAGGACTTTTGAATAATTAGGTATATAATTTTTATGGTTGTCAAAATTATATAAGCAAAAACAGAAATCAAACTCCTTTTCACGTAGGTTAGAAAAGGAGCTTTTATAT
AT-rich region
The information of repeat sequences

Motif GGSCGTCMG

StartP-valueSite
531.19e-06GCTGTTTAATGGCCGTCAGTCAACGGGTA
4871.94e-06TTCCTGATTTGGCCGTCCGGAACACGTGA
2833.50e-06ACTGGGTTCGGGGCGTCAGCGCCCGAGGG

Motif AANCAAACNCA

StartP-valueSite
1411.61e-07TTGATTGACTAACCAAACCCAGACACTGAAT
4581.82e-06AAGAAGCGCAAAAAAAACCCACGTGCAAGTT
6201.06e-05CAAAAACAGAAATCAAACTCCTTTTCACGTA
6071.62e-05AAAATTATATAAGCAAAAACAGAAATCAAAC
4471.77e-05ATTTAATAATAAAGAAGCGCAAAAAAAACCC

Motif CKCCCG

StartP-valueSite
2924.47e-05GGGGCGTCAGCGCCCGAGGGCTTAGA
2351.10e-04TGAGCGGGAGCTCCCGCTCAATTATG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000174 100.0 663 0 0 1 663 1 663 0.0 1225
pORI00000183 97.283 368 4 6 299 663 334 698 0.0 619
pORI00000183 86.081 273 28 8 1 269 1 267 0.0 285
pORI00000197 99.407 337 1 1 328 663 350 686 0.0 610
pORI00000082 88.0 250 22 8 124 368 851 1097 0.0 289
pORI00000067 86.0 250 27 8 124 368 362 608 0.0 261
pORI00000963 95.238 84 3 1 57 140 101 19 1.03e-31 132
pORI00000811 95.238 84 3 1 57 140 101 19 1.03e-31 132
pORI00000751 95.238 84 3 1 57 140 556 638 1.03e-31 132
pORI00000454 95.0 80 3 1 193 271 1104 1183 1.72e-29 124
pORI00000265 81.761 159 20 7 117 271 434 587 1.72e-29 124
pORI00000215 88.889 99 9 2 193 290 1213 1310 2.23e-28 121