RefSeq NC_017528.1
Accession number NC_017528.1
DoriC accession number ORI96040579
OriC length 781 nt
OriC AT content 0.40589
The location of oriC region 4405985..178 nt
Browse in NCBI
OriC map
OriC sequences
rpmHGGGCGTCTCCTCGCTATGTCTGGCAACATCACCATCCGGCCACTCACTGCCTTCCAACTCGATTGGCCCGCGGGACAGTCGGAGGTAGTTTTCGCTGCTGGCCGGCGCGGTCCCTGGACTAATCCAGGTCGCAGCCGCATCGCCGACTTTCGGGCGACTGTTCGAGGGTACTTACGCGCCTTCGCCTGGTCAAACCTCGCCCACCCGGCAACCGCTTCAGGGCATCCTGCCCGCTAAGCTGCTCACCATCCGTACACCCGAGACCGCCACACTCACAAAGAACCCACCACAACGCAAAACAACGGTTGGCAGCCGTACGGAAAACTGTTAGCTTCGGGCGGTGTAGTTATCACGCCGTTTCAGCGTGGAAACGGCACTCGACAATCAAGCGAGGATGGCGGATCGACTAGCGGCCCGGACAACTTGAACCGGGTGTTTTCAACACGAGGATCGCGAGCCGTTGCCGGTAGGTTGCGGCTGGTTATCGACGGTACTGTCCACATTTGTGGATAGCCATGTGGACAGTTCACCTGCCCACAACAACGGTTGTAGCTCGACCCGGAACCAAGACCCGGAACTAACGAGAACCAGGGAGATACGTCGTTGACCGATGACCCCGGTTCAGGCTTCACCACAGTGTGGAACGCGGTCGTCTCCGAACTTAACGGCGACCCTAAGGTTGACGACGGACCCAGCAGTGATGCTAATCTCAGCGCTCCGCTGACCCCTCAGCAAAGGGCTTGGCTCAATCTCGTCCAGCCATTGACCATCGTCGAGGGGTdnaA
rpmHGGGCGTCTCCTCGCTATGTCTGGCAACATCACCATCCGGCCACTCACTGCCTTCCAACTCGATTGGCCCGCGGGACAGTCGGAGGTAGTTTTCGCTGCTGGCCGGCGCGGTCCCTGGACTAATCCAGGTCGCAGCCGCATCGCCGACTTTCGGGCGACTGTTCGAGGGTACTTACGCGCCTTCGCCTGGTCAAACCTCGCCCACCCGGCAACCGCTTCAGGGCATCCTGCCCGCTAAGCTGCTCACCATCCGTACACCCGAGACCGCCACACTCACAAAGAACCCACCACAACGCAAAACAACGGTTGGCAGCCGTACGGAAAACTGTTAGCTTCGGGCGGTGTAGTTATCACGCCGTTTCAGCGTGGAAACGGCACTCGACAATCAAGCGAGGATGGCGGATCGACTAGCGGCCCGGACAACTTGAACCGGGTGTTTTCAACACGAGGATCGCGAGCCGTTGCCGGTAGGTTGCGGCTGGTTATCGACGGTACTGTCCACATTTGTGGATAGCCATGTGGACAGTTCACCTGCCCACAACAACGGTTGTAGCTCGACCCGGAACCAAGACCCGGAACTAACGAGAACCAGGGAGATACGTCGTTGACCGATGACCCCGGTTCAGGCTTCACCACAGTGTGGAACGCGGTCGTCTCCGAACTTAACGGCGACCCTAAGGTTGACGACGGACCCAGCAGTGATGCTAATCTCAGCGCTCCGCTGACCCCTCAGCAAAGGGCTTGGCTCAATCTCGTCCAGCCATTGACCATCGTCGAGGGGTdnaA
rpmHGGGCGTCTCCTCGCTATGTCTGGCAACATCACCATCCGGCCACTCACTGCCTTCCAACTCGATTGGCCCGCGGGACAGTCGGAGGTAGTTTTCGCTGCTGGCCGGCGCGGTCCCTGGACTAATCCAGGTCGCAGCCGCATCGCCGACTTTCGGGCGACTGTTCGAGGGTACTTACGCGCCTTCGCCTGGTCAAACCTCGCCCACCCGGCAACCGCTTCAGGGCATCCTGCCCGCTAAGCTGCTCACCATCCGTACACCCGAGACCGCCACACTCACAAAGAACCCACCACAACGCAAAACAACGGTTGGCAGCCGTACGGAAAACTGTTAGCTTCGGGCGGTGTAGTTATCACGCCGTTTCAGCGTGGAAACGGCACTCGACAATCAAGCGAGGATGGCGGATCGACTAGCGGCCCGGACAACTTGAACCGGGTGTTTTCAACACGAGGATCGCGAGCCGTTGCCGGTAGGTTGCGGCTGGTTATCGACGGTACTGTCCACATTTGTGGATAGCCATGTGGACAGTTCACCTGCCCACAACAACGGTTGTAGCTCGACCCGGAACCAAGACCCGGAACTAACGAGAACCAGGGAGATACGTCGTTGACCGATGACCCCGGTTCAGGCTTCACCACAGTGTGGAACGCGGTCGTCTCCGAACTTAACGGCGACCCTAAGGTTGACGACGGACCCAGCAGTGATGCTAATCTCAGCGCTCCGCTGACCCCTCAGCAAAGGGCTTGGCTCAATCTCGTCCAGCCATTGACCATCGTCGAGGGGTdnaA
rpmHGGGCGTCTCCTCGCTATGTCTGGCAACATCACCATCCGGCCACTCACTGCCTTCCAACTCGATTGGCCCGCGGGACAGTCGGAGGTAGTTTTCGCTGCTGGCCGGCGCGGTCCCTGGACTAATCCAGGTCGCAGCCGCATCGCCGACTTTCGGGCGACTGTTCGAGGGTACTTACGCGCCTTCGCCTGGTCAAACCTCGCCCACCCGGCAACCGCTTCAGGGCATCCTGCCCGCTAAGCTGCTCACCATCCGTACACCCGAGACCGCCACACTCACAAAGAACCCACCACAACGCAAAACAACGGTTGGCAGCCGTACGGAAAACTGTTAGCTTCGGGCGGTGTAGTTATCACGCCGTTTCAGCGTGGAAACGGCACTCGACAATCAAGCGAGGATGGCGGATCGACTAGCGGCCCGGACAACTTGAACCGGGTGTTTTCAACACGAGGATCGCGAGCCGTTGCCGGTAGGTTGCGGCTGGTTATCGACGGTACTGTCCACATTTGTGGATAGCCATGTGGACAGTTCACCTGCCCACAACAACGGTTGTAGCTCGACCCGGAACCAAGACCCGGAACTAACGAGAACCAGGGAGATACGTCGTTGACCGATGACCCCGGTTCAGGCTTCACCACAGTGTGGAACGCGGTCGTCTCCGAACTTAACGGCGACCCTAAGGTTGACGACGGACCCAGCAGTGATGCTAATCTCAGCGCTCCGCTGACCCCTCAGCAAAGGGCTTGGCTCAATCTCGTCCAGCCATTGACCATCGTCGAGGGGTdnaA
rpmHGGGCGTCTCCTCGCTATGTCTGGCAACATCACCATCCGGCCACTCACTGCCTTCCAACTCGATTGGCCCGCGGGACAGTCGGAGGTAGTTTTCGCTGCTGGCCGGCGCGGTCCCTGGACTAATCCAGGTCGCAGCCGCATCGCCGACTTTCGGGCGACTGTTCGAGGGTACTTACGCGCCTTCGCCTGGTCAAACCTCGCCCACCCGGCAACCGCTTCAGGGCATCCTGCCCGCTAAGCTGCTCACCATCCGTACACCCGAGACCGCCACACTCACAAAGAACCCACCACAACGCAAAACAACGGTTGGCAGCCGTACGGAAAACTGTTAGCTTCGGGCGGTGTAGTTATCACGCCGTTTCAGCGTGGAAACGGCACTCGACAATCAAGCGAGGATGGCGGATCGACTAGCGGCCCGGACAACTTGAACCGGGTGTTTTCAACACGAGGATCGCGAGCCGTTGCCGGTAGGTTGCGGCTGGTTATCGACGGTACTGTCCACATTTGTGGATAGCCATGTGGACAGTTCACCTGCCCACAACAACGGTTGTAGCTCGACCCGGAACCAAGACCCGGAACTAACGAGAACCAGGGAGATACGTCGTTGACCGATGACCCCGGTTCAGGCTTCACCACAGTGTGGAACGCGGTCGTCTCCGAACTTAACGGCGACCCTAAGGTTGACGACGGACCCAGCAGTGATGCTAATCTCAGCGCTCCGCTGACCCCTCAGCAAAGGGCTTGGCTCAATCTCGTCCAGCCATTGACCATCGTCGAGGGGTdnaA
rpmHGGGCGTCTCCTCGCTATGTCTGGCAACATCACCATCCGGCCACTCACTGCCTTCCAACTCGATTGGCCCGCGGGACAGTCGGAGGTAGTTTTCGCTGCTGGCCGGCGCGGTCCCTGGACTAATCCAGGTCGCAGCCGCATCGCCGACTTTCGGGCGACTGTTCGAGGGTACTTACGCGCCTTCGCCTGGTCAAACCTCGCCCACCCGGCAACCGCTTCAGGGCATCCTGCCCGCTAAGCTGCTCACCATCCGTACACCCGAGACCGCCACACTCACAAAGAACCCACCACAACGCAAAACAACGGTTGGCAGCCGTACGGAAAACTGTTAGCTTCGGGCGGTGTAGTTATCACGCCGTTTCAGCGTGGAAACGGCACTCGACAATCAAGCGAGGATGGCGGATCGACTAGCGGCCCGGACAACTTGAACCGGGTGTTTTCAACACGAGGATCGCGAGCCGTTGCCGGTAGGTTGCGGCTGGTTATCGACGGTACTGTCCACATTTGTGGATAGCCATGTGGACAGTTCACCTGCCCACAACAACGGTTGTAGCTCGACCCGGAACCAAGACCCGGAACTAACGAGAACCAGGGAGATACGTCGTTGACCGATGACCCCGGTTCAGGCTTCACCACAGTGTGGAACGCGGTCGTCTCCGAACTTAACGGCGACCCTAAGGTTGACGACGGACCCAGCAGTGATGCTAATCTCAGCGCTCCGCTGACCCCTCAGCAAAGGGCTTGGCTCAATCTCGTCCAGCCATTGACCATCGTCGAGGGGTdnaA
rpmHGGGCGTCTCCTCGCTATGTCTGGCAACATCACCATCCGGCCACTCACTGCCTTCCAACTCGATTGGCCCGCGGGACAGTCGGAGGTAGTTTTCGCTGCTGGCCGGCGCGGTCCCTGGACTAATCCAGGTCGCAGCCGCATCGCCGACTTTCGGGCGACTGTTCGAGGGTACTTACGCGCCTTCGCCTGGTCAAACCTCGCCCACCCGGCAACCGCTTCAGGGCATCCTGCCCGCTAAGCTGCTCACCATCCGTACACCCGAGACCGCCACACTCACAAAGAACCCACCACAACGCAAAACAACGGTTGGCAGCCGTACGGAAAACTGTTAGCTTCGGGCGGTGTAGTTATCACGCCGTTTCAGCGTGGAAACGGCACTCGACAATCAAGCGAGGATGGCGGATCGACTAGCGGCCCGGACAACTTGAACCGGGTGTTTTCAACACGAGGATCGCGAGCCGTTGCCGGTAGGTTGCGGCTGGTTATCGACGGTACTGTCCACATTTGTGGATAGCCATGTGGACAGTTCACCTGCCCACAACAACGGTTGTAGCTCGACCCGGAACCAAGACCCGGAACTAACGAGAACCAGGGAGATACGTCGTTGACCGATGACCCCGGTTCAGGCTTCACCACAGTGTGGAACGCGGTCGTCTCCGAACTTAACGGCGACCCTAAGGTTGACGACGGACCCAGCAGTGATGCTAATCTCAGCGCTCCGCTGACCCCTCAGCAAAGGGCTTGGCTCAATCTCGTCCAGCCATTGACCATCGTCGAGGGGTdnaA
rpmhGGGCGTCTCCTCGCTATGTCTGGCAACATCACCATCCGGCCACTCACTGCCTTCCAACTCGATTGGCCCGCGGGACAGTCGGAGGTAGTTTTCGCTGCTGGCCGGCGCGGTCCCTGGACTAATCCAGGTCGCAGCCGCATCGCCGACTTTCGGGCGACTGTTCGAGGGTACTTACGCGCCTTCGCCTGGTCAAACCTCGCCCACCCGGCAACCGCTTCAGGGCATCCTGCCCGCTAAGCTGCTCACCATCCGTACACCCGAGACCGCCACACTCACAAAGAACCCACCACAACGCAAAACAACGGTTGGCAGCCGTACGGAAAACTGTTAGCTTCGGGCGGTGTAGTTATCACGCCGTTTCAGCGTGGAAACGGCACTCGACAATCAAGCGAGGATGGCGGATCGACTAGCGGCCCGGACAACTTGAACCGGGTGTTTTCAACACGAGGATCGCGAGCCGTTGCCGGTAGGTTGCGGCTGGTTATCGACGGTACTGTCCACATTTGTGGATAGCCATGTGGACAGTTCACCTGCCCACAACAACGGTTGTAGCTCGACCCGGAACCAAGACCCGGAACTAACGAGAACCAGGGAGATACGTCGTTGACCGATGACCCCGGTTCAGGCTTCACCACAGTGTGGAACGCGGTCGTCTCCGAACTTAACGGCGACCCTAAGGTTGACGACGGACCCAGCAGTGATGCTAATCTCAGCGCTCCGCTGACCCCTCAGCAAAGGGCTTGGCTCAATCTCGTCCAGCCATTGACCATCGTCGAGGGGTdnaa
rpmHGGGCGTCTCCTCGCTATGTCTGGCAACATCACCATCCGGCCACTCACTGCCTTCCAACTCGATTGGCCCGCGGGACAGTCGGAGGTAGTTTTCGCTGCTGGCCGGCGCGGTCCCTGGACTAATCCAGGTCGCAGCCGCATCGCCGACTTTCGGGCGACTGTTCGAGGGTACTTACGCGCCTTCGCCTGGTCAAACCTCGCCCACCCGGCAACCGCTTCAGGGCATCCTGCCCGCTAAGCTGCTCACCATCCGTACACCCGAGACCGCCACACTCACAAAGAACCCACCACAACGCAAAACAACGGTTGGCAGCCGTACGGAAAACTGTTAGCTTCGGGCGGTGTAGTTATCACGCCGTTTCAGCGTGGAAACGGCACTCGACAATCAAGCGAGGATGGCGGATCGACTAGCGGCCCGGACAACTTGAACCGGGTGTTTTCAACACGAGGATCGCGAGCCGTTGCCGGTAGGTTGCGGCTGGTTATCGACGGTACTGTCCACATTTGTGGATAGCCATGTGGACAGTTCACCTGCCCACAACAACGGTTGTAGCTCGACCCGGAACCAAGACCCGGAACTAACGAGAACCAGGGAGATACGTCGTTGACCGATGACCCCGGTTCAGGCTTCACCACAGTGTGGAACGCGGTCGTCTCCGAACTTAACGGCGACCCTAAGGTTGACGACGGACCCAGCAGTGATGCTAATCTCAGCGCTCCGCTGACCCCTCAGCAAAGGGCTTGGCTCAATCTCGTCCAGCCATTGACCATCGTCGAGGGGTdnaA
rpmHGGGCGTCTCCTCGCTATGTCTGGCAACATCACCATCCGGCCACTCACTGCCTTCCAACTCGATTGGCCCGCGGGACAGTCGGAGGTAGTTTTCGCTGCTGGCCGGCGCGGTCCCTGGACTAATCCAGGTCGCAGCCGCATCGCCGACTTTCGGGCGACTGTTCGAGGGTACTTACGCGCCTTCGCCTGGTCAAACCTCGCCCACCCGGCAACCGCTTCAGGGCATCCTGCCCGCTAAGCTGCTCACCATCCGTACACCCGAGACCGCCACACTCACAAAGAACCCACCACAACGCAAAACAACGGTTGGCAGCCGTACGGAAAACTGTTAGCTTCGGGCGGTGTAGTTATCACGCCGTTTCAGCGTGGAAACGGCACTCGACAATCAAGCGAGGATGGCGGATCGACTAGCGGCCCGGACAACTTGAACCGGGTGTTTTCAACACGAGGATCGCGAGCCGTTGCCGGTAGGTTGCGGCTGGTTATCGACGGTACTGTCCACATTTGTGGATAGCCATGTGGACAGTTCACCTGCCCACAACAACGGTTGTAGCTCGACCCGGAACCAAGACCCGGAACTAACGAGAACCAGGGAGATACGTCGTTGACCGATGACCCCGGTTCAGGCTTCACCACAGTGTGGAACGCGGTCGTCTCCGAACTTAACGGCGACCCTAAGGTTGACGACGGACCCAGCAGTGATGCTAATCTCAGCGCTCCGCTGACCCCTCAGCAAAGGGCTTGGCTCAATCTCGTCCAGCCATTGACCATCGTCGAGGGGTdnaA
rpmHGGGCGTCTCCTCGCTATGTCTGGCAACATCACCATCCGGCCACTCACTGCCTTCCAACTCGATTGGCCCGCGGGACAGTCGGAGGTAGTTTTCGCTGCTGGCCGGCGCGGTCCCTGGACTAATCCAGGTCGCAGCCGCATCGCCGACTTTCGGGCGACTGTTCGAGGGTACTTACGCGCCTTCGCCTGGTCAAACCTCGCCCACCCGGCAACCGCTTCAGGGCATCCTGCCCGCTAAGCTGCTCACCATCCGTACACCCGAGACCGCCACACTCACAAAGAACCCACCACAACGCAAAACAACGGTTGGCAGCCGTACGGAAAACTGTTAGCTTCGGGCGGTGTAGTTATCACGCCGTTTCAGCGTGGAAACGGCACTCGACAATCAAGCGAGGATGGCGGATCGACTAGCGGCCCGGACAACTTGAACCGGGTGTTTTCAACACGAGGATCGCGAGCCGTTGCCGGTAGGTTGCGGCTGGTTATCGACGGTACTGTCCACATTTGTGGATAGCCATGTGGACAGTTCACCTGCCCACAACAACGGTTGTAGCTCGACCCGGAACCAAGACCCGGAACTAACGAGAACCAGGGAGATACGTCGTTGACCGATGACCCCGGTTCAGGCTTCACCACAGTGTGGAACGCGGTCGTCTCCGAACTTAACGGCGACCCTAAGGTTGACGACGGACCCAGCAGTGATGCTAATCTCAGCGCTCCGCTGACCCCTCAGCAAAGGGCTTGGCTCAATCTCGTCCAGCCATTGACCATCGTCGAGGGGTdnaA
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif TCGVVGGTASTTT

StartP-valueSite
791.09e-07CGCGGGACAGTCGGAGGTAGTTTTCGCTGCTGG
4852.21e-07CGGCTGGTTATCGACGGTACTGTCCACATTTGT
1623.07e-07GGGCGACTGTTCGAGGGTACTTACGCGCCTTCG
4611.03e-06TCGCGAGCCGTTGCCGGTAGGTTGCGGCTGGTT

Motif AACAACGGTTG

StartP-valueSite
5391.64e-07ACCTGCCCACAACAACGGTTGTAGCTCGACC
2981.64e-07CACAACGCAAAACAACGGTTGGCAGCCGTAC

Motif TGTGGA

StartP-valueSite
6381.61e-04TTCACCACAGTGTGGAACGCGGTCGT
5171.61e-04TGGATAGCCATGTGGACAGTTCACCT
5051.61e-04TGTCCACATTTGTGGATAGCCATGTG
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI96040579 100.0 781 0 0 1 781 1 781 0.0 1443
ORI96040591 99.834 603 1 0 1 603 1 603 0.0 1109
ORI96040589 99.834 603 1 0 1 603 1 603 0.0 1109
ORI96040578 99.834 603 1 0 1 603 1 603 0.0 1109
ORI96010624 99.834 603 1 0 1 603 861 1463 0.0 1109
ORI96040558 99.834 603 1 0 1 603 1 603 0.0 1109
ORI95010994 99.834 603 1 0 1 603 1 603 0.0 1109
ORI95040361 99.834 603 1 0 1 603 1 603 0.0 1109
ORI94040330 99.834 603 1 0 1 603 1 603 0.0 1109
ORI93040202 99.834 603 1 0 1 603 1 603 0.0 1109
ORI92710501 99.834 603 1 0 1 603 1 603 0.0 1109
ORI92040110 99.834 603 1 0 1 603 1 603 0.0 1109
ORI90040108 99.834 603 1 0 1 603 1 603 0.0 1109
ORI94040332 99.337 603 4 0 1 603 1 603 0.0 1092
ORI95011031 98.843 605 5 1 1 603 1 605 0.0 1077
ORI96010623 75.526 380 58 18 301 674 323 673 3.34e-38 154
ORI96010627 73.977 342 54 18 301 636 540 852 9.49e-24 106
ORI95011027 73.977 342 54 18 301 636 519 831 9.49e-24 106
ORI95011026 73.977 342 54 18 301 636 558 870 9.49e-24 106
ORI96010622 73.977 342 54 18 301 636 558 870 9.49e-24 106