RefSeq NC_010364.1
DoriC accession number aORI10010137
OriC length 810 nt
OriC AT content 0.4037
The location of oriC region 1794670..1795479 nt
Browse in NCBI
OriC map
OriC sequences
CCTTGCTCTCCATTCGCACCCCATGCCTTGTATGTTTGACGCAGGACGTGTCTGGATGCGTATAAAACCCCAGTGAGAGGGCGTAAAATCCGTCAGACGAGGGTCTGACCGTGGTCAGATCGAACCCCGGCTCCGGGATCGACGCCGAGACGAGAGCGCACCCCGTCAGCCACGATGCAGCCACACCCACGACAGGCGATATCAACACACACGAACATCCACAACCCCCCACCCCTTCGTTTCGGGTGGAACTCCAGAACAGGGACGGCCCCGGCCCACCCGCCAGCCAAGATCAGCGCCCGAACGCAACTAGAACTAGACAACTACCGTATTCTGCTCCTAGTTTTTGCTAGTTTGCGGTTGTTGTTCTGATTGTAGGGACTTAGTAGTACCGCTACTCTAGAAGGGGGGTGGGGACCCCCCACCCCACAGAAGACTCTCGTTCCACTCGAAACGAAGGGGTGGGGGGTTGGCAGCCACGTTTGACCTCAACCTCTGTTTCAGGTGGAACGGCGATTCATCGTCTTTCTCCGCGGGTCGCCCCGGCTGGTTCCGGACCGCATCCCTCCCCCCTCTAACCGGCGGGACATCGGATGGCGGGCGCCCTGGTATCGGGTTGCTGTGATCGTGCCTGCCCGGAAGCGTCCCCGCTATCGTAACTTATTAGTCCGACTCGGACCCACTGTTTCATCTGCATCAACTGGAACGCTGTCGGAGCGGGGACGCTATACCGCCCGCTGATGGCCTTGCTGGCCGTTCTCTCTTCCCGACTGCGTATTCCACCCGAAACAAGGGGGTGTGCGTGAATAC
CCTTGCTCTCCATTCGCACCCCATGCCTTGTATGTTTGACGCAGGACGTGTCTGGATGCGTATAAAACCCCAGTGAGAGGGCGTAAAATCCGTCAGACGAGGGTCTGACCGTGGTCAGATCGAACCCCGGCTCCGGGATCGACGCCGAGACGAGAGCGCACCCCGTCAGCCACGATGCAGCCACACCCACGACAGGCGATATCAACACACACGAACATCCACAACCCCCCACCCCTTCGTTTCGGGTGGAACTCCAGAACAGGGACGGCCCCGGCCCACCCGCCAGCCAAGATCAGCGCCCGAACGCAACTAGAACTAGACAACTACCGTATTCTGCTCCTAGTTTTTGCTAGTTTGCGGTTGTTGTTCTGATTGTAGGGACTTAGTAGTACCGCTACTCTAGAAGGGGGGTGGGGACCCCCCACCCCACAGAAGACTCTCGTTCCACTCGAAACGAAGGGGTGGGGGGTTGGCAGCCACGTTTGACCTCAACCTCTGTTTCAGGTGGAACGGCGATTCATCGTCTTTCTCCGCGGGTCGCCCCGGCTGGTTCCGGACCGCATCCCTCCCCCCTCTAACCGGCGGGACATCGGATGGCGGGCGCCCTGGTATCGGGTTGCTGTGATCGTGCCTGCCCGGAAGCGTCCCCGCTATCGTAACTTATTAGTCCGACTCGGACCCACTGTTTCATCTGCATCAACTGGAACGCTGTCGGAGCGGGGACGCTATACCGCCCGCTGATGGCCTTGCTGGCCGTTCTCTCTTCCCGACTGCGTATTCCACCCGAAACAAGGGGGTGTGCGTGAATAC
CCTTGCTCTCCATTCGCACCCCATGCCTTGTATGTTTGACGCAGGACGTGTCTGGATGCGTATAAAACCCCAGTGAGAGGGCGTAAAATCCGTCAGACGAGGGTCTGACCGTGGTCAGATCGAACCCCGGCTCCGGGATCGACGCCGAGACGAGAGCGCACCCCGTCAGCCACGATGCAGCCACACCCACGACAGGCGATATCAACACACACGAACATCCACAACCCCCCACCCCTTCGTTTCGGGTGGAACTCCAGAACAGGGACGGCCCCGGCCCACCCGCCAGCCAAGATCAGCGCCCGAACGCAACTAGAACTAGACAACTACCGTATTCTGCTCCTAGTTTTTGCTAGTTTGCGGTTGTTGTTCTGATTGTAGGGACTTAGTAGTACCGCTACTCTAGAAGGGGGGTGGGGACCCCCCACCCCACAGAAGACTCTCGTTCCACTCGAAACGAAGGGGTGGGGGGTTGGCAGCCACGTTTGACCTCAACCTCTGTTTCAGGTGGAACGGCGATTCATCGTCTTTCTCCGCGGGTCGCCCCGGCTGGTTCCGGACCGCATCCCTCCCCCCTCTAACCGGCGGGACATCGGATGGCGGGCGCCCTGGTATCGGGTTGCTGTGATCGTGCCTGCCCGGAAGCGTCCCCGCTATCGTAACTTATTAGTCCGACTCGGACCCACTGTTTCATCTGCATCAACTGGAACGCTGTCGGAGCGGGGACGCTATACCGCCCGCTGATGGCCTTGCTGGCCGTTCTCTCTTCCCGACTGCGTATTCCACCCGAAACAAGGGGGTGTGCGTGAATAC
ORB     AT-rich region
The information of repeat sequences

Motif TCARVTGGAAC

StartP-valueSite
5011.87e-07AACCTCTGTTTCAGGTGGAACGGCGATTCAT
6977.09e-07TTCATCTGCATCAACTGGAACGCTGTCGGAG
1152.64e-06CTGACCGTGGTCAGATCGAACCCCGGCTCCG
2423.26e-06CCCCTTCGTTTCGGGTGGAACTCCAGAACAG
3066.69e-06GCGCCCGAACGCAACTAGAACTAGACAACTA

Motif TWCCRCYMSWMWMRARGGGGKGKGSG

StartP-valueSite
4432.34e-15AAGACTCTCGTTCCACTCGAAACGAAGGGGTGGGGGGTTGGCAGCC
7782.95e-13CGACTGCGTATTCCACCCGAAACAAGGGGGTGTGCGTGAATAC
3904.01e-12GACTTAGTAGTACCGCTACTCTAGAAGGGGGGTGGGGACCCCCCAC

Motif CASCCACGA

StartP-valueSite
1676.28e-06CGCACCCCGTCAGCCACGATGCAGCCACA
1841.38e-05GATGCAGCCACACCCACGACAGGCGATAT
2842.15e-05GCCCACCCGCCAGCCAAGATCAGCGCCCG
4742.80e-05GGGGGGTTGGCAGCCACGTTTGACCTCAA
2063.72e-05GCGATATCAACACACACGAACATCCACAA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010137 100.0 810 0 0 1 810 1 810 0.0 1496
aORI10010009 100.0 786 0 0 25 810 1 786 0.0 1452
aORI10010248 100.0 30 0 0 441 470 684 713 2.27e-09 57
aORI10010247 100.0 30 0 0 222 251 2006 1977 2.27e-09 57
aORI10010325 100.0 29 0 0 441 469 604 632 8.18e-09 55
aORI10010169 96.97 33 0 1 223 254 534 566 8.18e-09 55
aORI10010312 100.0 28 0 0 225 252 544 571 2.94e-08 53
aORI10010237 100.0 28 0 0 225 252 675 648 2.94e-08 53
aORI10010082 100.0 28 0 0 225 252 577 550 2.94e-08 53