RefSeq NC_021921.1
DoriC accession number aORI10010248
OriC length 1156 nt
OriC AT content 0.5061
The location of oriC region 1406963..1408118 nt
Browse in NCBI
OriC map
OriC sequences
CCTATCCTCCCGCGCCCGAGCGAGTCGGGGCATCTGCGCGTAACACTTTCCCGAATTCACTTAACTGTACGTCAGACATATATAACGAATTCTGAACGAACGGACAATCCGACGGTGTCGATCCCGTCTGCTGAGGGTATCCGACAGCAAACCATTATGACTTGTAGTTATTTGTCTTCCCTACCCCCCACCCCTTCGTTTCAAGTGGAGCGACCCAGACCACCGGTGGAGACACGAGCCGATCGACTGGAAAGGCGGAATTCCGTGAGAATCGACGAACAGTCGAGCTCGGTCGCGATCCATTGTTCGCTGGAGAAAAGACAACAGAAATCTGAGAGATATTCAGTGTACAGCAGTATATAACGGATTATCGTGGCCACCTATTCGAGTGCGAAGGGGGCCAGTTGGAGACGACGGAGAACGAGAGATGGTCCAATTCGGCGGATAGATCCGCATTGGAAAATAACGCACACCGTTGGAACGATCGACATCAAACGTCTAGCTAGATCTAGTACTTTTGTTCTAGTCGTACGTAGTACTATTTACTACTAGACAGTATAGATTATCTCAATAAACGTTTTAGTTTCGTCGTACGGATACAGTTTCACCTAATGAGTTATAAAACCCTGTCATTCTAGACTATCGTCCCGCGTTGCTGAGACCCCCCACCCGGGTGTGCTGGCCGTTCCACTCGAAACGAAGGGGTGGGGGGTGGGGGCTCTCTCGTCGGAAGTCTCACTCGTGGGGTGTCTCTCATCGACTCGTTGATTCGATCGGTGGCTTCTGTTTCATTTTTCGAGATCGGTCGGGCCACTCCCTCTCTGTGGACGAGCCTCATCAAAGCTGCCGCATGACTGTTTACCTATTTCGTTCCCTGTTACTCTATTTCGTTTTCTGCATCCCTGTTACCCCATTTCGTTCCCTGTTACCCCATTTCGTTCTCTGCAACGATATGGCCGTGCGCTCATTCTTTACGATCGACTGGGCACAACCTGAACCGAAATTTTTAATAGCGTCTCACCCACCCGTTGTTCTGGTTCAACTGCACAGAGGACATCGTCTCGCATTCCGGTATTTCGACGCTACAGGCCGTTTTCGGCCAGTATTTCGGATCTGCGGGCGAATCTCCACCTGAAAGAAGGGGGATTGAAATCAC
CCTATCCTCCCGCGCCCGAGCGAGTCGGGGCATCTGCGCGTAACACTTTCCCGAATTCACTTAACTGTACGTCAGACATATATAACGAATTCTGAACGAACGGACAATCCGACGGTGTCGATCCCGTCTGCTGAGGGTATCCGACAGCAAACCATTATGACTTGTAGTTATTTGTCTTCCCTACCCCCCACCCCTTCGTTTCAAGTGGAGCGACCCAGACCACCGGTGGAGACACGAGCCGATCGACTGGAAAGGCGGAATTCCGTGAGAATCGACGAACAGTCGAGCTCGGTCGCGATCCATTGTTCGCTGGAGAAAAGACAACAGAAATCTGAGAGATATTCAGTGTACAGCAGTATATAACGGATTATCGTGGCCACCTATTCGAGTGCGAAGGGGGCCAGTTGGAGACGACGGAGAACGAGAGATGGTCCAATTCGGCGGATAGATCCGCATTGGAAAATAACGCACACCGTTGGAACGATCGACATCAAACGTCTAGCTAGATCTAGTACTTTTGTTCTAGTCGTACGTAGTACTATTTACTACTAGACAGTATAGATTATCTCAATAAACGTTTTAGTTTCGTCGTACGGATACAGTTTCACCTAATGAGTTATAAAACCCTGTCATTCTAGACTATCGTCCCGCGTTGCTGAGACCCCCCACCCGGGTGTGCTGGCCGTTCCACTCGAAACGAAGGGGTGGGGGGTGGGGGCTCTCTCGTCGGAAGTCTCACTCGTGGGGTGTCTCTCATCGACTCGTTGATTCGATCGGTGGCTTCTGTTTCATTTTTCGAGATCGGTCGGGCCACTCCCTCTCTGTGGACGAGCCTCATCAAAGCTGCCGCATGACTGTTTACCTATTTCGTTCCCTGTTACTCTATTTCGTTTTCTGCATCCCTGTTACCCCATTTCGTTCCCTGTTACCCCATTTCGTTCTCTGCAACGATATGGCCGTGCGCTCATTCTTTACGATCGACTGGGCACAACCTGAACCGAAATTTTTAATAGCGTCTCACCCACCCGTTGTTCTGGTTCAACTGCACAGAGGACATCGTCTCGCATTCCGGTATTTCGACGCTACAGGCCGTTTTCGGCCAGTATTTCGGATCTGCGGGCGAATCTCCACCTGAAAGAAGGGGGATTGAAATCAC
CCTATCCTCCCGCGCCCGAGCGAGTCGGGGCATCTGCGCGTAACACTTTCCCGAATTCACTTAACTGTACGTCAGACATATATAACGAATTCTGAACGAACGGACAATCCGACGGTGTCGATCCCGTCTGCTGAGGGTATCCGACAGCAAACCATTATGACTTGTAGTTATTTGTCTTCCCTACCCCCCACCCCTTCGTTTCAAGTGGAGCGACCCAGACCACCGGTGGAGACACGAGCCGATCGACTGGAAAGGCGGAATTCCGTGAGAATCGACGAACAGTCGAGCTCGGTCGCGATCCATTGTTCGCTGGAGAAAAGACAACAGAAATCTGAGAGATATTCAGTGTACAGCAGTATATAACGGATTATCGTGGCCACCTATTCGAGTGCGAAGGGGGCCAGTTGGAGACGACGGAGAACGAGAGATGGTCCAATTCGGCGGATAGATCCGCATTGGAAAATAACGCACACCGTTGGAACGATCGACATCAAACGTCTAGCTAGATCTAGTACTTTTGTTCTAGTCGTACGTAGTACTATTTACTACTAGACAGTATAGATTATCTCAATAAACGTTTTAGTTTCGTCGTACGGATACAGTTTCACCTAATGAGTTATAAAACCCTGTCATTCTAGACTATCGTCCCGCGTTGCTGAGACCCCCCACCCGGGTGTGCTGGCCGTTCCACTCGAAACGAAGGGGTGGGGGGTGGGGGCTCTCTCGTCGGAAGTCTCACTCGTGGGGTGTCTCTCATCGACTCGTTGATTCGATCGGTGGCTTCTGTTTCATTTTTCGAGATCGGTCGGGCCACTCCCTCTCTGTGGACGAGCCTCATCAAAGCTGCCGCATGACTGTTTACCTATTTCGTTCCCTGTTACTCTATTTCGTTTTCTGCATCCCTGTTACCCCATTTCGTTCCCTGTTACCCCATTTCGTTCTCTGCAACGATATGGCCGTGCGCTCATTCTTTACGATCGACTGGGCACAACCTGAACCGAAATTTTTAATAGCGTCTCACCCACCCGTTGTTCTGGTTCAACTGCACAGAGGACATCGTCTCGCATTCCGGTATTTCGACGCTACAGGCCGTTTTCGGCCAGTATTTCGGATCTGCGGGCGAATCTCCACCTGAAAGAAGGGGGATTGAAATCAC
ORB     AT-rich region
The information of repeat sequences

Motif CYATTTCGTTCYCTG

StartP-valueSite
9316.59e-09CCCTGTTACCCCATTTCGTTCTCTGCAACGATATG
9116.59e-09CCCTGTTACCCCATTTCGTTCCCTGTTACCCCATT
8636.59e-09GACTGTTTACCTATTTCGTTCCCTGTTACTCTATT
8831.32e-08CCCTGTTACTCTATTTCGTTTTCTGCATCCCTGTT

Motif CGATCGACTBGAAACG

StartP-valueSite
2408.65e-10AGACACGAGCCGATCGACTGGAAAGGCGGAATTCCG
4821.41e-08ACCGTTGGAACGATCGACATCAAACGTCTAGCTAGA
6842.48e-08GTGTGCTGGCCGTTCCACTCGAAACGAAGGGGTGGG
9752.90e-08TCATTCTTTACGATCGACTGGGCACAACCTGAACCG

Motif ACAGHHDHAYATAAYGAVTTVT

StartP-valueSite
3501.35e-11TATTCAGTGTACAGCAGTATATAACGGATTATCGTGGCCACC
722.71e-10TAACTGTACGTCAGACATATATAACGAATTCTGAACGAACGG
1448.74e-10AGGGTATCCGACAGCAAACCATTATGACTTGTAGTTATTTGT
5991.32e-09TCGTACGGATACAGTTTCACCTAATGAGTTATAAAACCCTGT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010248 100.0 1156 0 0 1 1156 1 1156 0.0 2135
aORI10010149 85.227 176 25 1 977 1152 180 6 0.0 180