RefSeq NC_002607.1
DoriC accession number aORI10010009
OriC length 786 nt
OriC AT content 0.4033
The location of oriC region 1806444..1807229 nt
Browse in NCBI
OriC map
OriC sequences
GCCTTGTATGTTTGACGCAGGACGTGTCTGGATGCGTATAAAACCCCAGTGAGAGGGCGTAAAATCCGTCAGACGAGGGTCTGACCGTGGTCAGATCGAACCCCGGCTCCGGGATCGACGCCGAGACGAGAGCGCACCCCGTCAGCCACGATGCAGCCACACCCACGACAGGCGATATCAACACACACGAACATCCACAACCCCCCACCCCTTCGTTTCGGGTGGAACTCCAGAACAGGGACGGCCCCGGCCCACCCGCCAGCCAAGATCAGCGCCCGAACGCAACTAGAACTAGACAACTACCGTATTCTGCTCCTAGTTTTTGCTAGTTTGCGGTTGTTGTTCTGATTGTAGGGACTTAGTAGTACCGCTACTCTAGAAGGGGGGTGGGGACCCCCCACCCCACAGAAGACTCTCGTTCCACTCGAAACGAAGGGGTGGGGGGTTGGCAGCCACGTTTGACCTCAACCTCTGTTTCAGGTGGAACGGCGATTCATCGTCTTTCTCCGCGGGTCGCCCCGGCTGGTTCCGGACCGCATCCCTCCCCCCTCTAACCGGCGGGACATCGGATGGCGGGCGCCCTGGTATCGGGTTGCTGTGATCGTGCCTGCCCGGAAGCGTCCCCGCTATCGTAACTTATTAGTCCGACTCGGACCCACTGTTTCATCTGCATCAACTGGAACGCTGTCGGAGCGGGGACGCTATACCGCCCGCTGATGGCCTTGCTGGCCGTTCTCTCTTCCCGACTGCGTATTCCACCCGAAACAAGGGGGTGTGCGTGAATAC
GCCTTGTATGTTTGACGCAGGACGTGTCTGGATGCGTATAAAACCCCAGTGAGAGGGCGTAAAATCCGTCAGACGAGGGTCTGACCGTGGTCAGATCGAACCCCGGCTCCGGGATCGACGCCGAGACGAGAGCGCACCCCGTCAGCCACGATGCAGCCACACCCACGACAGGCGATATCAACACACACGAACATCCACAACCCCCCACCCCTTCGTTTCGGGTGGAACTCCAGAACAGGGACGGCCCCGGCCCACCCGCCAGCCAAGATCAGCGCCCGAACGCAACTAGAACTAGACAACTACCGTATTCTGCTCCTAGTTTTTGCTAGTTTGCGGTTGTTGTTCTGATTGTAGGGACTTAGTAGTACCGCTACTCTAGAAGGGGGGTGGGGACCCCCCACCCCACAGAAGACTCTCGTTCCACTCGAAACGAAGGGGTGGGGGGTTGGCAGCCACGTTTGACCTCAACCTCTGTTTCAGGTGGAACGGCGATTCATCGTCTTTCTCCGCGGGTCGCCCCGGCTGGTTCCGGACCGCATCCCTCCCCCCTCTAACCGGCGGGACATCGGATGGCGGGCGCCCTGGTATCGGGTTGCTGTGATCGTGCCTGCCCGGAAGCGTCCCCGCTATCGTAACTTATTAGTCCGACTCGGACCCACTGTTTCATCTGCATCAACTGGAACGCTGTCGGAGCGGGGACGCTATACCGCCCGCTGATGGCCTTGCTGGCCGTTCTCTCTTCCCGACTGCGTATTCCACCCGAAACAAGGGGGTGTGCGTGAATAC
GCCTTGTATGTTTGACGCAGGACGTGTCTGGATGCGTATAAAACCCCAGTGAGAGGGCGTAAAATCCGTCAGACGAGGGTCTGACCGTGGTCAGATCGAACCCCGGCTCCGGGATCGACGCCGAGACGAGAGCGCACCCCGTCAGCCACGATGCAGCCACACCCACGACAGGCGATATCAACACACACGAACATCCACAACCCCCCACCCCTTCGTTTCGGGTGGAACTCCAGAACAGGGACGGCCCCGGCCCACCCGCCAGCCAAGATCAGCGCCCGAACGCAACTAGAACTAGACAACTACCGTATTCTGCTCCTAGTTTTTGCTAGTTTGCGGTTGTTGTTCTGATTGTAGGGACTTAGTAGTACCGCTACTCTAGAAGGGGGGTGGGGACCCCCCACCCCACAGAAGACTCTCGTTCCACTCGAAACGAAGGGGTGGGGGGTTGGCAGCCACGTTTGACCTCAACCTCTGTTTCAGGTGGAACGGCGATTCATCGTCTTTCTCCGCGGGTCGCCCCGGCTGGTTCCGGACCGCATCCCTCCCCCCTCTAACCGGCGGGACATCGGATGGCGGGCGCCCTGGTATCGGGTTGCTGTGATCGTGCCTGCCCGGAAGCGTCCCCGCTATCGTAACTTATTAGTCCGACTCGGACCCACTGTTTCATCTGCATCAACTGGAACGCTGTCGGAGCGGGGACGCTATACCGCCCGCTGATGGCCTTGCTGGCCGTTCTCTCTTCCCGACTGCGTATTCCACCCGAAACAAGGGGGTGTGCGTGAATAC
ORB     AT-rich region
The information of repeat sequences

Motif TCARVTGGAAC

StartP-valueSite
4771.99e-07AACCTCTGTTTCAGGTGGAACGGCGATTCAT
6737.39e-07TTCATCTGCATCAACTGGAACGCTGTCGGAG
912.72e-06CTGACCGTGGTCAGATCGAACCCCGGCTCCG
2183.38e-06CCCCTTCGTTTCGGGTGGAACTCCAGAACAG
2827.01e-06GCGCCCGAACGCAACTAGAACTAGACAACTA

Motif TWCCRCYMSWMWMRARGGGGKGKGSG

StartP-valueSite
4193.81e-15AAGACTCTCGTTCCACTCGAAACGAAGGGGTGGGGGGTTGGCAGCC
7543.57e-13CGACTGCGTATTCCACCCGAAACAAGGGGGTGTGCGTGAATAC
3664.50e-12GACTTAGTAGTACCGCTACTCTAGAAGGGGGGTGGGGACCCCCCAC

Motif CAGCCACGAY

StartP-valueSite
1431.30e-06CGCACCCCGTCAGCCACGATGCAGCCACAC
2605.09e-06GCCCACCCGCCAGCCAAGATCAGCGCCCGA
4508.84e-06GGGGGGTTGGCAGCCACGTTTGACCTCAAC
1601.73e-05GATGCAGCCACACCCACGACAGGCGATATC
1922.77e-05CACACACGAACATCCACAACCCCCCACCCC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010137 100.0 786 0 0 1 786 25 810 0.0 1452
aORI10010009 100.0 786 0 0 1 786 1 786 0.0 1452
aORI10010248 100.0 30 0 0 417 446 684 713 2.21e-09 57
aORI10010247 100.0 30 0 0 198 227 2006 1977 2.21e-09 57
aORI10010325 100.0 29 0 0 417 445 604 632 7.93e-09 55
aORI10010169 96.97 33 0 1 199 230 534 566 7.93e-09 55
aORI10010312 100.0 28 0 0 201 228 544 571 2.85e-08 53
aORI10010237 100.0 28 0 0 201 228 675 648 2.85e-08 53
aORI10010082 100.0 28 0 0 201 228 577 550 2.85e-08 53