Basic Information

Assembly acc GCF_010727605.1
Acc NZ_AP022568.1
OriID ORI97207393
Organism Mycobacterium simiae
Topology Circular
Lineage Bacteria ; Bacillati ; Actinomycetota ; Actinomycetes ; Mycobacteriales ; Mycobacteriaceae ; Mycobacterium ; Mycobacterium simiae
Assembly Level Complete
Literature linkage Not linked
Chromosome size 5788994 nt
Chromosome GC content 66.22%
Indicator genes
  • hemE      523871... 524920nt
  • hemB      1859499... 1860479nt
  • dnaN      2674122... 2675321nt
  • dnaA      2675825... 2677354nt
  • rpmH      2677943... 2678086nt
OriC location
  • 2675322 ... 2675824 nt
OriC Length
  • 503 nt
OriC AT Content
  • 0.4056

Comparative Sequence Support

Recurrence category Singleton
Sequence cluster BC-OH007324
Cluster members 1
Distinct accessions 1
Species / genera 1 / 1
Literature-linked members 0

Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.

Top 10 most similar Ori IDs

Rank Ori ID Accession Organism Identity Reciprocal coverage Literature linkage
1 ORI97207411 NZ_AP022587.1 Mycobacterium stomatepiae 78.70% 90.50% Not linked
2 ORI97207326 NZ_AP018164.1 Mycobacterium shigaense 72.50% 94.80% Not linked
3 ORI97249127 NZ_CP022927.1 Mycobacterium shigaense 72.50% 94.80% Not linked
4 ORI97268660 NZ_CP157314.1 Mycobacterium shigaense 72.50% 94.80% Not linked
5 ORI97207401 NZ_AP022576.1 Mycobacterium florentinum 80.70% 82.30% Not linked
6 ORI97261291 NZ_CP113116.1 Mycobacterium sp. Aquia_213 81.70% 78.20% Not linked
7 ORI97261467 NZ_CP113529.1 Mycobacterium sp. Aquia_216 80.70% 78.40% Not linked
8 ORI97209974 NZ_CP092423.1 Mycobacterium lentiflavum 80.50% 77.70% Not linked
9 ORI97209622 NZ_CP080999.1 Mycobacterium malmoense 73.30% 79.80% Not linked
10 ORI97255910 NZ_CP060015.1 Mycobacterium malmoense 73.30% 79.80% Not linked

The interactive Z-curves rotated at the maximum of the GC disparity.

RIP Sequence-Similarity Network

Bacteria Chromosomes 1,537 RIP sequence subfamilies from 66,403 proteins (Complete/Chromosome only) Accession: NZ_AP022568.1
Open full view

Replication Initiation Protein Information

Gene Start Gene End Translation
2675825 2677354 MTDDPGSGFTTVWNAVVSEL...

OriC Visualization

OriC map
OriC sequences
dnaNAGCGTCCCTTCACCTACCCAAATCCGAAATCGGCGGCTTGCCTCTGCGCCGCGCCACGACATCCACAACGGCAGTCGAACAACAACCGTAGAGCTTCCGCGCCCATCTTGAAAGCTAATCGCAAAGGCCGACAACCCGAGTGGGTGACGACGAGAGCGCGCTGTGCAGCGACGCGTCCCCAAGGCTGTTCTTCAAAGAAGAAACAACCCAGAGATCTCAGTACCAGTATTAAGGCCTGTGCAGTTTGGGGACAGCCGCGACTTGCTGCAGCTAGCGCGGTGGGCGCCCTGTGGATGACTGTCTTGACACCTGTGCAGCCGATGTTGGGCTACTGGGGATGAGGCGGGCGTGTGCACGTCGGTGCCGAGTACTGCACCGACAGTTGGCACGGTTGTGCACAACGCTGCGCACATGTCGGCGGTGTGGTTGGAGTTACAAATGAGCGAGAAGTTTTTGGGAAAATAGTTGGTGATTCGCCGCCAGATGCGGCGCGTCGGGGCGGTdnaA
dnaNAGCGTCCCTTCACCTACCCAAATCCGAAATCGGCGGCTTGCCTCTGCGCCGCGCCACGACATCCACAACGGCAGTCGAACAACAACCGTAGAGCTTCCGCGCCCATCTTGAAAGCTAATCGCAAAGGCCGACAACCCGAGTGGGTGACGACGAGAGCGCGCTGTGCAGCGACGCGTCCCCAAGGCTGTTCTTCAAAGAAGAAACAACCCAGAGATCTCAGTACCAGTATTAAGGCCTGTGCAGTTTGGGGACAGCCGCGACTTGCTGCAGCTAGCGCGGTGGGCGCCCTGTGGATGACTGTCTTGACACCTGTGCAGCCGATGTTGGGCTACTGGGGATGAGGCGGGCGTGTGCACGTCGGTGCCGAGTACTGCACCGACAGTTGGCACGGTTGTGCACAACGCTGCGCACATGTCGGCGGTGTGGTTGGAGTTACAAATGAGCGAGAAGTTTTTGGGAAAATAGTTGGTGATTCGCCGCCAGATGCGGCGCGTCGGGGCGGTdnaA
dnaNAGCGTCCCTTCACCTACCCAAATCCGAAATCGGCGGCTTGCCTCTGCGCCGCGCCACGACATCCACAACGGCAGTCGAACAACAACCGTAGAGCTTCCGCGCCCATCTTGAAAGCTAATCGCAAAGGCCGACAACCCGAGTGGGTGACGACGAGAGCGCGCTGTGCAGCGACGCGTCCCCAAGGCTGTTCTTCAAAGAAGAAACAACCCAGAGATCTCAGTACCAGTATTAAGGCCTGTGCAGTTTGGGGACAGCCGCGACTTGCTGCAGCTAGCGCGGTGGGCGCCCTGTGGATGACTGTCTTGACACCTGTGCAGCCGATGTTGGGCTACTGGGGATGAGGCGGGCGTGTGCACGTCGGTGCCGAGTACTGCACCGACAGTTGGCACGGTTGTGCACAACGCTGCGCACATGTCGGCGGTGTGGTTGGAGTTACAAATGAGCGAGAAGTTTTTGGGAAAATAGTTGGTGATTCGCCGCCAGATGCGGCGCGTCGGGGCGGTdnaA
dnaNAGCGTCCCTTCACCTACCCAAATCCGAAATCGGCGGCTTGCCTCTGCGCCGCGCCACGACATCCACAACGGCAGTCGAACAACAACCGTAGAGCTTCCGCGCCCATCTTGAAAGCTAATCGCAAAGGCCGACAACCCGAGTGGGTGACGACGAGAGCGCGCTGTGCAGCGACGCGTCCCCAAGGCTGTTCTTCAAAGAAGAAACAACCCAGAGATCTCAGTACCAGTATTAAGGCCTGTGCAGTTTGGGGACAGCCGCGACTTGCTGCAGCTAGCGCGGTGGGCGCCCTGTGGATGACTGTCTTGACACCTGTGCAGCCGATGTTGGGCTACTGGGGATGAGGCGGGCGTGTGCACGTCGGTGCCGAGTACTGCACCGACAGTTGGCACGGTTGTGCACAACGCTGCGCACATGTCGGCGGTGTGGTTGGAGTTACAAATGAGCGAGAAGTTTTTGGGAAAATAGTTGGTGATTCGCCGCCAGATGCGGCGCGTCGGGGCGGTdnaA
dnaNAGCGTCCCTTCACCTACCCAAATCCGAAATCGGCGGCTTGCCTCTGCGCCGCGCCACGACATCCACAACGGCAGTCGAACAACAACCGTAGAGCTTCCGCGCCCATCTTGAAAGCTAATCGCAAAGGCCGACAACCCGAGTGGGTGACGACGAGAGCGCGCTGTGCAGCGACGCGTCCCCAAGGCTGTTCTTCAAAGAAGAAACAACCCAGAGATCTCAGTACCAGTATTAAGGCCTGTGCAGTTTGGGGACAGCCGCGACTTGCTGCAGCTAGCGCGGTGGGCGCCCTGTGGATGACTGTCTTGACACCTGTGCAGCCGATGTTGGGCTACTGGGGATGAGGCGGGCGTGTGCACGTCGGTGCCGAGTACTGCACCGACAGTTGGCACGGTTGTGCACAACGCTGCGCACATGTCGGCGGTGTGGTTGGAGTTACAAATGAGCGAGAAGTTTTTGGGAAAATAGTTGGTGATTCGCCGCCAGATGCGGCGCGTCGGGGCGGTdnaA
dnaNAGCGTCCCTTCACCTACCCAAATCCGAAATCGGCGGCTTGCCTCTGCGCCGCGCCACGACATCCACAACGGCAGTCGAACAACAACCGTAGAGCTTCCGCGCCCATCTTGAAAGCTAATCGCAAAGGCCGACAACCCGAGTGGGTGACGACGAGAGCGCGCTGTGCAGCGACGCGTCCCCAAGGCTGTTCTTCAAAGAAGAAACAACCCAGAGATCTCAGTACCAGTATTAAGGCCTGTGCAGTTTGGGGACAGCCGCGACTTGCTGCAGCTAGCGCGGTGGGCGCCCTGTGGATGACTGTCTTGACACCTGTGCAGCCGATGTTGGGCTACTGGGGATGAGGCGGGCGTGTGCACGTCGGTGCCGAGTACTGCACCGACAGTTGGCACGGTTGTGCACAACGCTGCGCACATGTCGGCGGTGTGGTTGGAGTTACAAATGAGCGAGAAGTTTTTGGGAAAATAGTTGGTGATTCGCCGCCAGATGCGGCGCGTCGGGGCGGTdnaA
dnaNAGCGTCCCTTCACCTACCCAAATCCGAAATCGGCGGCTTGCCTCTGCGCCGCGCCACGACATCCACAACGGCAGTCGAACAACAACCGTAGAGCTTCCGCGCCCATCTTGAAAGCTAATCGCAAAGGCCGACAACCCGAGTGGGTGACGACGAGAGCGCGCTGTGCAGCGACGCGTCCCCAAGGCTGTTCTTCAAAGAAGAAACAACCCAGAGATCTCAGTACCAGTATTAAGGCCTGTGCAGTTTGGGGACAGCCGCGACTTGCTGCAGCTAGCGCGGTGGGCGCCCTGTGGATGACTGTCTTGACACCTGTGCAGCCGATGTTGGGCTACTGGGGATGAGGCGGGCGTGTGCACGTCGGTGCCGAGTACTGCACCGACAGTTGGCACGGTTGTGCACAACGCTGCGCACATGTCGGCGGTGTGGTTGGAGTTACAAATGAGCGAGAAGTTTTTGGGAAAATAGTTGGTGATTCGCCGCCAGATGCGGCGCGTCGGGGCGGTdnaA
dnanAGCGTCCCTTCACCTACCCAAATCCGAAATCGGCGGCTTGCCTCTGCGCCGCGCCACGACATCCACAACGGCAGTCGAACAACAACCGTAGAGCTTCCGCGCCCATCTTGAAAGCTAATCGCAAAGGCCGACAACCCGAGTGGGTGACGACGAGAGCGCGCTGTGCAGCGACGCGTCCCCAAGGCTGTTCTTCAAAGAAGAAACAACCCAGAGATCTCAGTACCAGTATTAAGGCCTGTGCAGTTTGGGGACAGCCGCGACTTGCTGCAGCTAGCGCGGTGGGCGCCCTGTGGATGACTGTCTTGACACCTGTGCAGCCGATGTTGGGCTACTGGGGATGAGGCGGGCGTGTGCACGTCGGTGCCGAGTACTGCACCGACAGTTGGCACGGTTGTGCACAACGCTGCGCACATGTCGGCGGTGTGGTTGGAGTTACAAATGAGCGAGAAGTTTTTGGGAAAATAGTTGGTGATTCGCCGCCAGATGCGGCGCGTCGGGGCGGTdnaa
dnaNAGCGTCCCTTCACCTACCCAAATCCGAAATCGGCGGCTTGCCTCTGCGCCGCGCCACGACATCCACAACGGCAGTCGAACAACAACCGTAGAGCTTCCGCGCCCATCTTGAAAGCTAATCGCAAAGGCCGACAACCCGAGTGGGTGACGACGAGAGCGCGCTGTGCAGCGACGCGTCCCCAAGGCTGTTCTTCAAAGAAGAAACAACCCAGAGATCTCAGTACCAGTATTAAGGCCTGTGCAGTTTGGGGACAGCCGCGACTTGCTGCAGCTAGCGCGGTGGGCGCCCTGTGGATGACTGTCTTGACACCTGTGCAGCCGATGTTGGGCTACTGGGGATGAGGCGGGCGTGTGCACGTCGGTGCCGAGTACTGCACCGACAGTTGGCACGGTTGTGCACAACGCTGCGCACATGTCGGCGGTGTGGTTGGAGTTACAAATGAGCGAGAAGTTTTTGGGAAAATAGTTGGTGATTCGCCGCCAGATGCGGCGCGTCGGGGCGGTdnaA
dnaNAGCGTCCCTTCACCTACCCAAATCCGAAATCGGCGGCTTGCCTCTGCGCCGCGCCACGACATCCACAACGGCAGTCGAACAACAACCGTAGAGCTTCCGCGCCCATCTTGAAAGCTAATCGCAAAGGCCGACAACCCGAGTGGGTGACGACGAGAGCGCGCTGTGCAGCGACGCGTCCCCAAGGCTGTTCTTCAAAGAAGAAACAACCCAGAGATCTCAGTACCAGTATTAAGGCCTGTGCAGTTTGGGGACAGCCGCGACTTGCTGCAGCTAGCGCGGTGGGCGCCCTGTGGATGACTGTCTTGACACCTGTGCAGCCGATGTTGGGCTACTGGGGATGAGGCGGGCGTGTGCACGTCGGTGCCGAGTACTGCACCGACAGTTGGCACGGTTGTGCACAACGCTGCGCACATGTCGGCGGTGTGGTTGGAGTTACAAATGAGCGAGAAGTTTTTGGGAAAATAGTTGGTGATTCGCCGCCAGATGCGGCGCGTCGGGGCGGTdnaA
dnaNAGCGTCCCTTCACCTACCCAAATCCGAAATCGGCGGCTTGCCTCTGCGCCGCGCCACGACATCCACAACGGCAGTCGAACAACAACCGTAGAGCTTCCGCGCCCATCTTGAAAGCTAATCGCAAAGGCCGACAACCCGAGTGGGTGACGACGAGAGCGCGCTGTGCAGCGACGCGTCCCCAAGGCTGTTCTTCAAAGAAGAAACAACCCAGAGATCTCAGTACCAGTATTAAGGCCTGTGCAGTTTGGGGACAGCCGCGACTTGCTGCAGCTAGCGCGGTGGGCGCCCTGTGGATGACTGTCTTGACACCTGTGCAGCCGATGTTGGGCTACTGGGGATGAGGCGGGCGTGTGCACGTCGGTGCCGAGTACTGCACCGACAGTTGGCACGGTTGTGCACAACGCTGCGCACATGTCGGCGGTGTGGTTGGAGTTACAAATGAGCGAGAAGTTTTTGGGAAAATAGTTGGTGATTCGCCGCCAGATGCGGCGCGTCGGGGCGGTdnaA
5'-DnaA box-3'    3'-DnaA box-5'   Spacer   DnaA-trio   ATP-DnaA box
AT-rich region   GATC   CtrA binding motif   Fis binding site   IHF binding site

BLAST Results

Subject ID Identity (%) Length Mismatches Gaps Query Start Query End Subject Start Subject End E-value Bit Score
ORI60040082 75.12% 414 90 13 56 462 472 65 0.0 182.0
ORI10040011 74.88% 414 91 13 56 462 472 65 0.0 176.0
ORI94040331 73.56% 261 48 16 52 301 435 185 0.0 80.5
Found 3 BLAST matches
Return to browse page