ORI97261467 | DoriC 14.0: an updated database of prokaryotic replication origins with significantly expanded plasmid oriV annotations

Basic Information

Assembly acc	`GCF_026723865.1`
Acc	`NZ_CP113529.1`
OriID	ORI97261467
Organism	Mycobacterium sp. Aquia_216
Topology	Circular
Lineage	Bacteria ; Bacillati ; Actinomycetota ; Actinomycetes ; Mycobacteriales ; Mycobacteriaceae ; Mycobacterium ; Mycobacterium sp. Aquia_216
Assembly Level	Complete
Literature linkage	Not linked
Chromosome size	6065815 nt
Chromosome GC content	65.67%
Indicator genes	rpmH 304599... 304742nt dnaA 305347... 306870nt dnaN 307399... 308598nt hemB 1176575... 1177564nt hemE 2526322... 2527371nt
OriC location	306870 ... 307398 nt
OriC Length	528 nt
OriC AT Content	0.41

Comparative Sequence Support

Recurrence category Cross-taxon

Sequence cluster BC-OH001297

Cluster members 5

Distinct accessions 5

Species / genera 5 / 1

Literature-linked members 0

Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.

Top 10 most similar Ori IDs

Rank	Ori ID	Accession	Organism	Identity	Reciprocal coverage	Literature linkage
1	`ORI97261291`	`NZ_CP113116.1`	Mycobacterium sp. Aquia_213	88.10%	98.90%	Not linked
2	`ORI97209974`	`NZ_CP092423.1`	Mycobacterium lentiflavum	84.60%	97.40%	Not linked
3	`ORI97207401`	`NZ_AP022576.1`	Mycobacterium florentinum	87.90%	87.70%	Not linked
4	`ORI97209622`	`NZ_CP080999.1`	Mycobacterium malmoense	73.30%	97.30%	Not linked
5	`ORI97255910`	`NZ_CP060015.1`	Mycobacterium malmoense	73.30%	97.30%	Not linked
6	`ORI97207437`	`NZ_AP022615.1`	Mycobacterium heidelbergense	73.60%	95.80%	Not linked
7	`ORI97207494`	`NZ_AP024251.1`	Mycobacterium paraintracellulare	72.70%	95.90%	Not linked
8	`ORI97207502`	`NZ_AP024257.1`	Mycobacterium paraintracellulare	72.70%	95.90%	Not linked
9	`ORI97207504`	`NZ_AP024258.1`	Mycobacterium paraintracellulare	72.70%	95.90%	Not linked
10	`ORI97226948`	`NC_017904.1`	Mycobacterium sp. MOTT36Y	72.50%	95.90%	Not linked

The interactive Z-curves rotated at the maximum of the GC disparity.

RIP Sequence-Similarity Network

Replication Initiation Protein Information

Gene Start	Gene End	Translation
305347	306870	MTDDPGSGFTTVWNAVVSEL...

OriC Visualization

OriC map

OriC sequences

dnaATTCCCCCCACCGCGCGCCAAACTTTTTCAAAAAACTTCTCGCGCGTCTGTAACTCCAGCCACACCCGAACGATGTGGGCAGCGTTGTGTACAAACGTGCCAAACAACCGTGCAGCGATCGGCCCCCAAGTGCACACCCCTGGCCCATCCCCAGCGGCTCAACATCGGCTGCACAGTTACCAACCGTGTCATCCACAAGCGGATCGCACGGCTAGCTGCACCGAGGCGTACCTGTCCCCAGAATGCACAGGCCTTAATACTGGTACTGAGATCTCTCCGTAGTTTCTTCTTTGAAGAACAGCCTTGGGGACGCCTCGTTACACAGCGCCCGGGAACCTCTCATCCACTCGGTTTGTCGGCCACTGCGATTAGCTTTCAAGATGGGCGCAGAAGCTCTACGGTTGTGATTCGACTCCCGTTGTGGACATCGTGGCGCATGACCCCGCCATCGGCGTTCGTCGCGGGGCCCCCAAGCTAGCGGGGCGAAAGGCTAGCTGCCGGATTTGAACTTGGTAGGTGAAGGGACGCTdnaN

dnaaTTCCCCCCACCGCGCGCCAAACTTTTTCAAAAAACTTCTCGCGCGTCTGTAACTCCAGCCACACCCGAACGATGTGGGCAGCGTTGTGTACAAACGTGCCAAACAACCGTGCAGCGATCGGCCCCCAAGTGCACACCCCTGGCCCATCCCCAGCGGCTCAACATCGGCTGCACAGTTACCAACCGTGTCATCCACAAGCGGATCGCACGGCTAGCTGCACCGAGGCGTACCTGTCCCCAGAATGCACAGGCCTTAATACTGGTACTGAGATCTCTCCGTAGTTTCTTCTTTGAAGAACAGCCTTGGGGACGCCTCGTTACACAGCGCCCGGGAACCTCTCATCCACTCGGTTTGTCGGCCACTGCGATTAGCTTTCAAGATGGGCGCAGAAGCTCTACGGTTGTGATTCGACTCCCGTTGTGGACATCGTGGCGCATGACCCCGCCATCGGCGTTCGTCGCGGGGCCCCCAAGCTAGCGGGGCGAAAGGCTAGCTGCCGGATTTGAACTTGGTAGGTGAAGGGACGCTdnan

5'-DnaA box-3' 3'-DnaA box-5' Spacer DnaA-trio ATP-DnaA box
AT-rich region GATC CtrA binding motif Fis binding site IHF binding site

BLAST Results

There are no BLAST results available for this genome.

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