ORI97209622 | DoriC 14.0: an updated database of prokaryotic replication origins with significantly expanded plasmid oriV annotations

Basic Information

Assembly acc	`GCF_019645855.1`
Acc	`NZ_CP080999.1`
OriID	ORI97209622
Organism	Mycobacterium malmoense
Topology	Circular
Lineage	Bacteria ; Bacillati ; Actinomycetota ; Actinomycetes ; Mycobacteriales ; Mycobacteriaceae ; Mycobacterium ; Mycobacterium malmoense
Assembly Level	Complete
Literature linkage	Not linked
Chromosome size	5319859 nt
Chromosome GC content	66.99%
Indicator genes	dnaA 28... 1557nt dnaN 2079... 3278nt hemE 1927355... 1928416nt hemB 4533805... 4534791nt rpmH 5319138... 5319281nt
OriC location	1558 ... 2078 nt
OriC Length	521 nt
OriC AT Content	0.4184

Comparative Sequence Support

Recurrence category Recurrent

Sequence cluster BC-OH002597

Cluster members 2

Distinct accessions 2

Species / genera 1 / 1

Literature-linked members 0

Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.

Top 10 most similar Ori IDs

Rank	Ori ID	Accession	Organism	Identity	Reciprocal coverage	Literature linkage
1	`ORI97255910`	`NZ_CP060015.1`	Mycobacterium malmoense	100.00%	100.00%	Not linked
2	`ORI97207437`	`NZ_AP022615.1`	Mycobacterium heidelbergense	74.40%	97.10%	Not linked
3	`ORI97261467`	`NZ_CP113529.1`	Mycobacterium sp. Aquia_216	73.30%	97.30%	Not linked
4	`ORI97278294`	`NZ_CM141436.1`	Mycobacterium cajalii	71.80%	96.50%	Not linked
5	`ORI97207486`	`NZ_AP024245.1`	Mycobacterium intracellulare	73.00%	94.40%	Not linked
6	`ORI97207508`	`NZ_AP024260.1`	Mycobacterium intracellulare	73.00%	94.40%	Not linked
7	`ORI97207512`	`NZ_AP024264.1`	Mycobacterium intracellulare	73.00%	94.40%	Not linked
8	`ORI97227745`	`NZ_CP015267.1`	Mycobacterium intracellulare subsp. chimaera	73.00%	94.40%	Not linked
9	`ORI97227807`	`NZ_CP022223.1`	Mycobacterium intracellulare subsp. chimaera	73.00%	94.40%	Not linked
10	`ORI97227813`	`NZ_CP023151.1`	Mycobacterium intracellulare subsp. chimaera	73.00%	94.40%	Not linked

The interactive Z-curves rotated at the maximum of the GC disparity.

RIP Sequence-Similarity Network

Replication Initiation Protein Information

Gene Start	Gene End	Translation
28	1557	MTDDPGSGFTTVWNAVVSEL...

OriC Visualization

OriC map

OriC sequences

dnaACTCCAGGCACCCGGCACACTTTTTTCCCAAAAACTTCTCGCACTCCCCCCACACCAGTCACACCGAGACCCTTGTGCGCAGGCCTGTGCACAAACCACCCAAACACCAGTGCAACAACACGGTCGGCGTGCACACCCGTCTTTCATCCCCAGCGGACCAACATATGCCTCACAGTCATTGACGGTGTCATCCACAATCCGATCACTCGGCTAGCTGCACCAAGGCCCGGCCCTCCCCAGAATGCACAACCCTTATTACTGTTACTGAGATCCCTTCATCGGTTCTTCTTTGAAGTACAGCGTTGGGGACGCACATTGGCGGCGCACGTGGAGTTGTCGTCAGCGTGGCTTTGTCGGCCCTTGCGATTAGCTTTCAAGATGGCCGCAGAAGATCTACGGTTGTTCTTCGGCTGTCGTTGTGAGTGTCGTGGCGTTTACGCGTCAGGCGTTCGCCGCGGGGTCCCCGTGCTCGCGGGACGGTTGGCCAGTTGGTGTCGAACACTTGGCAGGTAAAGGGGCGCTdnaN

dnaaCTCCAGGCACCCGGCACACTTTTTTCCCAAAAACTTCTCGCACTCCCCCCACACCAGTCACACCGAGACCCTTGTGCGCAGGCCTGTGCACAAACCACCCAAACACCAGTGCAACAACACGGTCGGCGTGCACACCCGTCTTTCATCCCCAGCGGACCAACATATGCCTCACAGTCATTGACGGTGTCATCCACAATCCGATCACTCGGCTAGCTGCACCAAGGCCCGGCCCTCCCCAGAATGCACAACCCTTATTACTGTTACTGAGATCCCTTCATCGGTTCTTCTTTGAAGTACAGCGTTGGGGACGCACATTGGCGGCGCACGTGGAGTTGTCGTCAGCGTGGCTTTGTCGGCCCTTGCGATTAGCTTTCAAGATGGCCGCAGAAGATCTACGGTTGTTCTTCGGCTGTCGTTGTGAGTGTCGTGGCGTTTACGCGTCAGGCGTTCGCCGCGGGGTCCCCGTGCTCGCGGGACGGTTGGCCAGTTGGTGTCGAACACTTGGCAGGTAAAGGGGCGCTdnan

5'-DnaA box-3' 3'-DnaA box-5' Spacer DnaA-trio ATP-DnaA box
AT-rich region GATC CtrA binding motif Fis binding site IHF binding site

BLAST Results

There are no BLAST results available for this genome.

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