RefSeq NZ_CP019211
DoriC accession number pORI00000922
OriC length 665 nt
OriC AT content 0.6226
The location of oriC region 1487..2151 nt
Browse in NCBI
OriC map
OriC sequences
ATACATATGGCTATAATTTGCGTTTTAAGGCGTTTTAAACGTTCTGGTATATAATTTATACCAAAACAACTTTAAAACGCCTTAGATCTAATTTTAGAGGTCTTATAGAACATTTTAGGGTTGTTAGGGCTTGCCCTGACCGCCTGTAAGGCGCTTTGAGAACAAGATAAGGGTTTTATACTAAGACTGTCTTAAAACGGCTTAAACAAACGCTCAGAACTTTTCAAAGGAGTTCTTTATGAACTGTTTTTAAGCAAAGGAGCCTTTAGGCGACTGCGCAGTATAATGTGAGAGCGTAGCGATCACACATTTTTAGTGACCGTAGGGAGCGAGTTTCCCAGTTTAGAAAAATTCGCGAACTTGTTTGAGGAAAAAAGCAGGAGTTTTTTAGGCGGGAAATTTTGCCTCCTCTTTTATAATCTCTTTTTAAACCTCTTTTTAAACCTCTTTACCGTCGGCTGTATGCTTACTCTCCCAAGGTGTGCAGAATCTTTTGGGGGTCTTTTTGTCTGTTTTTAGGGGTCTTTTTGTCTGTTTTTAGGGGTCTTTTTGTCTGTTTTTGGGGGTCTTTTTGTCTGTTTTTAGGGGTCTTTAATTAGGGGCTTGACCCCTATTAGAAAGCTCTTTATAATTTTGTTAAGTAGTTAATCTTGAAGGAGGATTTT
ATACATATGGCTATAATTTGCGTTTTAAGGCGTTTTAAACGTTCTGGTATATAATTTATACCAAAACAACTTTAAAACGCCTTAGATCTAATTTTAGAGGTCTTATAGAACATTTTAGGGTTGTTAGGGCTTGCCCTGACCGCCTGTAAGGCGCTTTGAGAACAAGATAAGGGTTTTATACTAAGACTGTCTTAAAACGGCTTAAACAAACGCTCAGAACTTTTCAAAGGAGTTCTTTATGAACTGTTTTTAAGCAAAGGAGCCTTTAGGCGACTGCGCAGTATAATGTGAGAGCGTAGCGATCACACATTTTTAGTGACCGTAGGGAGCGAGTTTCCCAGTTTAGAAAAATTCGCGAACTTGTTTGAGGAAAAAAGCAGGAGTTTTTTAGGCGGGAAATTTTGCCTCCTCTTTTATAATCTCTTTTTAAACCTCTTTTTAAACCTCTTTACCGTCGGCTGTATGCTTACTCTCCCAAGGTGTGCAGAATCTTTTGGGGGTCTTTTTGTCTGTTTTTAGGGGTCTTTTTGTCTGTTTTTAGGGGTCTTTTTGTCTGTTTTTGGGGGTCTTTTTGTCTGTTTTTAGGGGTCTTTAATTAGGGGCTTGACCCCTATTAGAAAGCTCTTTATAATTTTGTTAAGTAGTTAATCTTGAAGGAGGATTTT
AT-rich region
The information of repeat sequences

Motif GGGGTCTTTTTGTCTGTTTTT

StartP-valueSite
5638.21e-12TCTGTTTTTGGGGGTCTTTTTGTCTGTTTTTAGGGGTCTTT
5418.21e-12TCTGTTTTTAGGGGTCTTTTTGTCTGTTTTTGGGGGTCTTT
5198.21e-12TCTGTTTTTAGGGGTCTTTTTGTCTGTTTTTAGGGGTCTTT
4978.21e-12GAATCTTTTGGGGGTCTTTTTGTCTGTTTTTAGGGGTCTTT

Motif CYAARACWGYYTTWAARCSNCTTWRM

StartP-valueSite
618.68e-13ATAATTTATACCAAAACAACTTTAAAACGCCTTAGATCTAATTTTA
1814.06e-12GGGTTTTATACTAAGACTGTCTTAAAACGGCTTAAACAAACGCTCA
1341.51e-10TTAGGGCTTGCCCTGACCGCCTGTAAGGCGCTTTGAGAACAAGATA
2543.47e-10CTGTTTTTAAGCAAAGGAGCCTTTAGGCGACTGCGCAGTATAATGT
4271.99e-09TAATCTCTTTTTAAACCTCTTTTTAAACCTCTTTACCGTCGGCTGT

Motif TTAGAGANCKTAGVGADC

StartP-valueSite
3135.03e-09TCACACATTTTTAGTGACCGTAGGGAGCGAGTTTCCCA
2878.12e-09CGCAGTATAATGTGAGAGCGTAGCGATCACACATTTTT
3431.87e-08GTTTCCCAGTTTAGAAAAATTCGCGAACTTGTTTGAGG
944.14e-08AGATCTAATTTTAGAGGTCTTATAGAACATTTTAGGGT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000922 100.0 665 0 0 1 665 1 665 0.0 1229
pORI00000933 98.955 670 0 7 1 665 668 1 0.0 1192
pORI00000739 87.783 663 60 17 16 665 655 1 0.0 756
pORI00000597 83.333 294 36 12 113 401 305 590 0.0 259
pORI00001003 78.912 294 53 8 118 405 565 275 0.0 191
pORI00000887 78.788 297 54 8 115 405 603 896 0.0 191
pORI00000738 78.788 297 54 8 115 405 880 1173 0.0 191
pORI00000376 97.674 43 0 1 113 154 500 542 6.35e-14 73