RefSeq NC_021989
DoriC accession number pORI00000597
OriC length 852 nt
OriC AT content 0.6174
The location of oriC region 8468..9319 nt
Browse in NCBI
OriC map
OriC sequences
ATTTGATTTAAAATCATGTTAAACTGAATGTGCAAATGATCAAACATTAGATACACGAAAGCCCCAGAGAGGTCGGATTCTCTGGGGCTTTTTTTCAGGTTGATGTCGCCTTTATTGATTTTACTTCTTGTTTCGGTTATTCAACCAATAACTGAATAAAGAGACACAAACTCCTACAAGAAGGGGGCAAATGAACAGTTCAAACATTAGATACACCTCCTTCCAGTCGCAAGACTGTCGGATAGGCGACAAGTTATTATATCTTAAAAAATTAAATTTGTGTGGTGTTTTTAAGTATCACTTGTTTTAGGGTTGTTAGGGCTTGCCCTGACCGCCTGTAAGGCGCTTCTCGACTAGATTAAGGGAAATTAATCAAGAATTGTCTTAGAACGGCTTAGACAAGCTTTCAGAGTCTCACACCTCCTCTTTGAACAACGGTTTTAGCAAAGGAGCCGGAGGCGACTGCGCAGTATAATATGAGAGCATAGCGATCACACCTTTTTAGCGACCGTAGGGAGCAAGTTTTCCAGTTTAGAAAAATTCGCGAACCTTTTTGGAGGAAAAAGTAGGAGTTTTTTAGGCGGGAAATTCAATGTGCTCTTAAGATATACTGTTAGATATACTGTTAGATATACTGTTAATAATAACTGTTAGGGATTAGCAACCTTATGGGAGAGTAAGTATTGACATAGGTAGTGGGGGATAAATTGTCACACTATGGGGGATAAATTGTCACACTATGGGGGGATAAATTGTCACACTATGGGGGATAAATTGTCACACTATGGGGGATAAATTGTGTTTTACATCCTCTTATGTCTATGATAACATAATTTATTGAGGTGATTTTTA
ATTTGATTTAAAATCATGTTAAACTGAATGTGCAAATGATCAAACATTAGATACACGAAAGCCCCAGAGAGGTCGGATTCTCTGGGGCTTTTTTTCAGGTTGATGTCGCCTTTATTGATTTTACTTCTTGTTTCGGTTATTCAACCAATAACTGAATAAAGAGACACAAACTCCTACAAGAAGGGGGCAAATGAACAGTTCAAACATTAGATACACCTCCTTCCAGTCGCAAGACTGTCGGATAGGCGACAAGTTATTATATCTTAAAAAATTAAATTTGTGTGGTGTTTTTAAGTATCACTTGTTTTAGGGTTGTTAGGGCTTGCCCTGACCGCCTGTAAGGCGCTTCTCGACTAGATTAAGGGAAATTAATCAAGAATTGTCTTAGAACGGCTTAGACAAGCTTTCAGAGTCTCACACCTCCTCTTTGAACAACGGTTTTAGCAAAGGAGCCGGAGGCGACTGCGCAGTATAATATGAGAGCATAGCGATCACACCTTTTTAGCGACCGTAGGGAGCAAGTTTTCCAGTTTAGAAAAATTCGCGAACCTTTTTGGAGGAAAAAGTAGGAGTTTTTTAGGCGGGAAATTCAATGTGCTCTTAAGATATACTGTTAGATATACTGTTAGATATACTGTTAATAATAACTGTTAGGGATTAGCAACCTTATGGGAGAGTAAGTATTGACATAGGTAGTGGGGGATAAATTGTCACACTATGGGGGATAAATTGTCACACTATGGGGGGATAAATTGTCACACTATGGGGGATAAATTGTCACACTATGGGGGATAAATTGTGTTTTACATCCTCTTATGTCTATGATAACATAATTTATTGAGGTGATTTTTA
AT-rich region
The information of repeat sequences

Motif TAAATTGTCACACTATGGGGG

StartP-valueSite
7713.77e-13CTATGGGGGATAAATTGTCACACTATGGGGGATAAATTGTG
7493.77e-13TATGGGGGGATAAATTGTCACACTATGGGGGATAAATTGTC
7263.77e-13CTATGGGGGATAAATTGTCACACTATGGGGGGATAAATTGT
7043.77e-13TAGTGGGGGATAAATTGTCACACTATGGGGGATAAATTGTC
1672.82e-10TAAAGAGACACAAACTCCTACAAGAAGGGGGCAAATGAACA

Motif TTAGATAYAC

StartP-valueSite
2071.49e-06AGTTCAAACATTAGATACACCTCCTTCCAG
471.49e-06TGATCAAACATTAGATACACGAAAGCCCCA
6264.41e-06AGATATACTGTTAGATATACTGTTAATAAT
6144.41e-06AGATATACTGTTAGATATACTGTTAGATAT
6028.72e-06AATGTGCTCTTAAGATATACTGTTAGATAT

Motif CACACC

StartP-valueSite
4935.95e-05GCATAGCGATCACACCTTTTTAGCGA
4165.95e-05TTCAGAGTCTCACACCTCCTCTTTGA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000597 100.0 852 0 0 1 852 1 852 0.0 1574
pORI00000597 98.305 59 0 1 743 800 698 756 1.04e-22 102
pORI00000597 98.305 59 0 1 698 756 743 800 1.04e-22 102
pORI00000597 100.0 37 0 0 764 800 697 733 1.06e-12 69
pORI00000597 100.0 37 0 0 697 733 764 800 1.06e-12 69
pORI00000887 77.199 557 90 28 53 590 354 892 0.0 291
pORI00001003 77.061 558 89 30 53 590 817 279 0.0 285
pORI00000738 77.02 557 91 28 53 590 631 1169 0.0 285
pORI00000922 83.333 294 36 12 305 590 113 401 0.0 259
pORI00000933 83.051 295 37 12 305 590 556 266 0.0 255
pORI00000739 79.863 293 49 9 305 590 558 269 0.0 206
pORI00000376 97.674 43 0 1 305 346 500 542 8.17e-14 73