RefSeq NZ_CP012444
DoriC accession number pORI00000738
OriC length 1469 nt
OriC AT content 0.6338
The location of oriC region 24142..25610 nt
Browse in NCBI
OriC map
OriC sequences
AAAAAATCTCCTTTTGCAATTATGTATAATTTATGTATACCATACAAATACTATATTTGTATAGCTGTTTTTTGCCAAAATGCTATACATAAGCTACCCACGATGGCGAAAAAGTGATATCAAATTTTTTTCTGAGAAACGTGATAGGCACAGCCTATCTACCCACTTTTTTTAGAAAGTGGGTACACGTTTCCTTATGCTCTTTAAAATTCGGGGGGAGTGCTGCACGTGTAATCGATAACCAAATTTAACAGACGAAAAATTGTTGGAATATAAAAATATGACACCCGAAAGAAAACGATCGTTGGAAAAATTAATGCAACTAGTGAACGAAGACGGCGGAATTTCAGACGCAGCTTTTGACGCATGGAGCGAATTTCATGGAGAATATAATTAAGTGGGTTTAAATGGCTCTAAAATCGCTTCTAAGAGTTTTTTTAGCTTGGACCAATGAAATACACCAAAAACTAAATAAAACGTCTTAAATCGAAAAATACGAGCTCTCAGAGCGACTTTATTTGTAAATGTTGCATATAAGAAATAATTACGGATTTTAGACTTTTGTAGGATATTTTTGAAATAAATATTTATTTCTGTTATAATTTGATTGCAAATAAGTGAACACGAAACACACGAAATCCCCAGAGAGGTCGGATTCTCTGGGGCTTTTTTTGTGGGCTGAGTCGCCTTAATTAAGTTTTACTTCTTGTTTCGGTTATTCAACCAGTAACTGAACAAAGCGCTTAAAAGCCCAACAAGAAGGGAGCAAATAAAGTTAGTGAACACGAAACACACCTCCTTCCAGTCGCAAGACTGTCGGATAGGCGACAATCAATTATACAATAAAAAAGCAAAAATAAGCCTAAGTTTTTTATTGCCTTGGGGTTGTTAGGGCTTGCCCTGACCGCCTGTAAGGCGCTTTAGAACGAAGGACATAGTTTTTATCGAATCTTGTCTTAGAACGGCTTAGACGAGCTCTCAGGACGCCACAAAGGAGTCCCTAATGAATTATTTTTGGCGAAGGAGCCTAAAGGCGACTGCTGCAAGTAAAATGTGAGAGCGTAGCGATCACTCCTTCTTACAGCGACCATAGGGAGCTAGATTGGCAGTTTAATATCATGCGCGAACCTGTTTATTTTAAAAAGTGGGTGATTTTTTGGCGGGAAATTTTGCTCGCGCGCGCGCGTTTATTTTATTTATTTTTTAAAGATTTTTTAGAACCCTTTTTAGGGGGCAGTTGAGCCTTACTCTCCCAACGGATACAGAAGGGTACTAACAACTTTTTATCTGAGTACTAACAACTTTTTATCTGAGTACTAACAACTTTTTATCTGAGTACTAACAACTTTTTATCTGAGTACTAACAACTTTTTATCTGAGTACTAATATCCTTTTGTATAATAACAACCAACCTATTTACGAGTTGGTTGTTAAAGGTTATTATTTATTTGTAAGGGGGGAAGAAAGGA
AAAAAATCTCCTTTTGCAATTATGTATAATTTATGTATACCATACAAATACTATATTTGTATAGCTGTTTTTTGCCAAAATGCTATACATAAGCTACCCACGATGGCGAAAAAGTGATATCAAATTTTTTTCTGAGAAACGTGATAGGCACAGCCTATCTACCCACTTTTTTTAGAAAGTGGGTACACGTTTCCTTATGCTCTTTAAAATTCGGGGGGAGTGCTGCACGTGTAATCGATAACCAAATTTAACAGACGAAAAATTGTTGGAATATAAAAATATGACACCCGAAAGAAAACGATCGTTGGAAAAATTAATGCAACTAGTGAACGAAGACGGCGGAATTTCAGACGCAGCTTTTGACGCATGGAGCGAATTTCATGGAGAATATAATTAAGTGGGTTTAAATGGCTCTAAAATCGCTTCTAAGAGTTTTTTTAGCTTGGACCAATGAAATACACCAAAAACTAAATAAAACGTCTTAAATCGAAAAATACGAGCTCTCAGAGCGACTTTATTTGTAAATGTTGCATATAAGAAATAATTACGGATTTTAGACTTTTGTAGGATATTTTTGAAATAAATATTTATTTCTGTTATAATTTGATTGCAAATAAGTGAACACGAAACACACGAAATCCCCAGAGAGGTCGGATTCTCTGGGGCTTTTTTTGTGGGCTGAGTCGCCTTAATTAAGTTTTACTTCTTGTTTCGGTTATTCAACCAGTAACTGAACAAAGCGCTTAAAAGCCCAACAAGAAGGGAGCAAATAAAGTTAGTGAACACGAAACACACCTCCTTCCAGTCGCAAGACTGTCGGATAGGCGACAATCAATTATACAATAAAAAAGCAAAAATAAGCCTAAGTTTTTTATTGCCTTGGGGTTGTTAGGGCTTGCCCTGACCGCCTGTAAGGCGCTTTAGAACGAAGGACATAGTTTTTATCGAATCTTGTCTTAGAACGGCTTAGACGAGCTCTCAGGACGCCACAAAGGAGTCCCTAATGAATTATTTTTGGCGAAGGAGCCTAAAGGCGACTGCTGCAAGTAAAATGTGAGAGCGTAGCGATCACTCCTTCTTACAGCGACCATAGGGAGCTAGATTGGCAGTTTAATATCATGCGCGAACCTGTTTATTTTAAAAAGTGGGTGATTTTTTGGCGGGAAATTTTGCTCGCGCGCGCGCGTTTATTTTATTTATTTTTTAAAGATTTTTTAGAACCCTTTTTAGGGGGCAGTTGAGCCTTACTCTCCCAACGGATACAGAAGGGTACTAACAACTTTTTATCTGAGTACTAACAACTTTTTATCTGAGTACTAACAACTTTTTATCTGAGTACTAACAACTTTTTATCTGAGTACTAACAACTTTTTATCTGAGTACTAATATCCTTTTGTATAATAACAACCAACCTATTTACGAGTTGGTTGTTAAAGGTTATTATTTATTTGTAAGGGGGGAAGAAAGGA
AT-rich region
The information of repeat sequences

Motif GTACTAACAACTTTTTATCTG

StartP-valueSite
13581.01e-12TTTTATCTGAGTACTAACAACTTTTTATCTGAGTACTAATA
13361.01e-12TTTTATCTGAGTACTAACAACTTTTTATCTGAGTACTAACA
13141.01e-12TTTTATCTGAGTACTAACAACTTTTTATCTGAGTACTAACA
12921.01e-12TTTTATCTGAGTACTAACAACTTTTTATCTGAGTACTAACA
12701.01e-12ATACAGAAGGGTACTAACAACTTTTTATCTGAGTACTAACA

Motif GRDTTTTYAGVGSCHDHTTTTGNBGSCTGDNGCGCVTT

StartP-valueSite
6531.38e-15CAGAGAGGTCGGATTCTCTGGGGCTTTTTTTGTGGGCTGAGTCGCCTTAATTAAGTTT
3415.46e-14CGAAGACGGCGGAATTTCAGACGCAGCTTTTGACGCATGGAGCGAATTTCATGGAGAA
11511.23e-13AAAAGTGGGTGATTTTTTGGCGGGAAATTTTGCTCGCGCGCGCGCGTTTATTTTATTT
12091.43e-13ATTTTTTAAAGATTTTTTAGAACCCTTTTTAGGGGGCAGTTGAGCCTTACTCTCCCAA
8833.40e-13TATTGCCTTGGGGTTGTTAGGGCTTGCCCTGACCGCCTGTAAGGCGCTTTAGAACGAA

Motif STKAAMACGAAAHABACGAVCTCYCAG

StartP-valueSite
7792.51e-13AATAAAGTTAGTGAACACGAAACACACCTCCTTCCAGTCGCAAGACT
6185.58e-13TTGCAAATAAGTGAACACGAAACACACGAAATCCCCAGAGAGGTCGG
4818.81e-13AATAAAACGTCTTAAATCGAAAAATACGAGCTCTCAGAGCGACTTTA
9562.99e-12CGAATCTTGTCTTAGAACGGCTTAGACGAGCTCTCAGGACGCCACAA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000738 100.0 1469 0 0 1 1469 1 1469 0.0 2713
pORI00000738 100.0 73 0 0 1314 1386 1270 1342 1.79e-32 135
pORI00000738 100.0 73 0 0 1270 1342 1314 1386 1.79e-32 135
pORI00000738 100.0 51 0 0 1336 1386 1270 1320 3.04e-20 95
pORI00000738 100.0 51 0 0 1270 1320 1336 1386 3.04e-20 95
pORI00000738 100.0 29 0 0 1358 1386 1270 1298 5.15e-08 55
pORI00000738 100.0 29 0 0 1270 1298 1358 1386 5.15e-08 55
pORI00001003 98.434 1469 0 2 1 1469 1446 1 0.0 2564
pORI00001003 93.75 64 2 2 1270 1331 134 71 3.04e-20 95
pORI00001003 93.75 64 2 2 1336 1399 178 117 3.04e-20 95
pORI00001003 90.476 42 2 2 1270 1309 112 71 5.15e-08 55
pORI00001003 90.476 42 2 2 1358 1399 178 139 5.15e-08 55
pORI00000887 97.988 1193 1 2 277 1469 1 1170 0.0 2049
pORI00000887 100.0 51 0 0 1336 1386 993 1043 3.04e-20 95
pORI00000887 100.0 51 0 0 1270 1320 1037 1087 3.04e-20 95
pORI00000887 100.0 29 0 0 1358 1386 993 1021 5.15e-08 55
pORI00000887 100.0 29 0 0 1270 1298 1059 1087 5.15e-08 55
pORI00000597 77.02 557 91 27 631 1169 53 590 0.0 285
pORI00000922 78.788 297 54 8 880 1173 115 405 0.0 191
pORI00000739 75.92 299 54 14 883 1173 553 265 4.98e-33 137
pORI00000376 100.0 37 0 0 883 919 506 542 1.84e-12 69