RefSeq NZ_CP020363.1
DoriC accession number aORI10010354
OriC length 125 nt
OriC AT content 0.368
The location of oriC region 1083427..1083551 nt
Browse in NCBI
OriC map
OriC sequences
CGGTTGCAAGCCAAGCACTCTTCCAGGCTGAGCTACCGGCCCATTGTTATGTATGTTAAGTTGTCCAAAATAAAAATTTTGTCCACTGGATTAAGCTTATAAATATTAAATAAACTACTTATCTG
CGGTTGCAAGCCAAGCACTCTTCCAGGCTGAGCTACCGGCCCATTGTTATGTATGTTAAGTTGTCCAAAATAAAAATTTTGTCCACTGGATTAAGCTTATAAATATTAAATAAACTACTTATCTG
CGGTTGCAAGCCAAGCACTCTTCCAGGCTGAGCTACCGGCCCATTGTTATGTATGTTAAGTTGTCCAAAATAAAAATTTTGTCCACTGGATTAAGCTTATAAATATTAAATAAACTACTTATCTG
ORB     AT-rich region
The information of repeat sequences

Motif CARGCYRAGC

StartP-valueSite
243.52e-07AGCACTCTTCCAGGCTGAGCTACCGGCCCA
72.08e-06CGGTTGCAAGCCAAGCACTCTTCCAG

Motif KGYCCA

StartP-valueSite
802.19e-04ATAAAAATTTTGTCCACTGGATTAAG
622.19e-04TATGTTAAGTTGTCCAAAATAAAAAT
385.50e-04CTGAGCTACCGGCCCATTGTTATGTA

Motif GTTAWG

StartP-valueSite
552.84e-04TGTTATGTATGTTAAGTTGTCCAAAA
465.76e-04CCGGCCCATTGTTATGTATGTTAAGT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010357 100.0 125 0 0 1 125 1 125 0.0 231
aORI10010354 100.0 125 0 0 1 125 1 125 0.0 231
aORI10010351 100.0 125 0 0 1 125 1 125 0.0 231
aORI10010348 100.0 125 0 0 1 125 1 125 0.0 231
aORI10010345 100.0 125 0 0 1 125 1 125 0.0 231
aORI10010363 93.878 49 3 0 1 49 513 465 8.6e-16 75
aORI10010013 93.182 44 3 0 1 44 155 112 5.17e-13 66
aORI10010103 93.023 43 3 0 1 43 307 265 1.86e-12 64
aORI10010359 92.857 42 3 0 1 42 496 455 6.69e-12 62
aORI10010337 92.857 42 3 0 1 42 496 455 6.69e-12 62
aORI10010334 92.857 42 3 0 1 42 496 455 6.69e-12 62
aORI10010331 92.857 42 3 0 1 42 496 455 6.69e-12 62
aORI10010269 91.304 46 3 1 1 46 37 81 6.69e-12 62
aORI10010117 91.304 46 3 1 1 46 37 81 6.69e-12 62
aORI10010114 91.304 46 3 1 1 46 37 81 6.69e-12 62
aORI10010110 92.857 42 3 0 1 42 496 455 6.69e-12 62
aORI10010089 91.304 46 3 1 1 46 37 81 6.69e-12 62
aORI10010077 91.304 46 3 1 1 46 37 81 6.69e-12 62
aORI10010074 91.304 46 3 1 1 46 37 81 6.69e-12 62
aORI10010071 91.304 46 3 1 1 46 351 307 6.69e-12 62
aORI10010068 91.304 46 3 1 1 46 37 81 6.69e-12 62
aORI10010065 91.304 46 3 1 1 46 37 81 6.69e-12 62
aORI10010062 91.304 46 3 1 1 46 37 81 6.69e-12 62
aORI10010010 92.857 42 3 0 1 42 496 455 6.69e-12 62
aORI10010356 94.595 37 1 1 7 43 362 327 3.11e-10 57
aORI10010353 94.595 37 1 1 7 43 362 327 3.11e-10 57
aORI10010350 94.595 37 1 1 7 43 362 327 3.11e-10 57
aORI10010347 94.595 37 1 1 7 43 362 327 3.11e-10 57
aORI10010344 94.595 37 1 1 7 43 362 327 3.11e-10 57
aORI10010196 94.595 37 1 1 7 43 362 327 3.11e-10 57
aORI10010193 94.595 37 1 1 7 43 362 327 3.11e-10 57
aORI10010099 96.97 33 1 0 11 43 532 500 3.11e-10 57
aORI10010024 94.595 37 1 1 7 43 362 327 3.11e-10 57
aORI10010343 100.0 29 0 0 15 43 76 104 1.12e-09 55
aORI10010342 100.0 29 0 0 15 43 76 104 1.12e-09 55
aORI10010341 100.0 29 0 0 15 43 76 104 1.12e-09 55
aORI10010340 100.0 29 0 0 15 43 76 104 1.12e-09 55
aORI10010339 100.0 29 0 0 15 43 76 104 1.12e-09 55
aORI10010100 88.636 44 5 0 1 44 671 714 1.12e-09 55
aORI10010043 100.0 29 0 0 15 43 76 104 1.12e-09 55
aORI10010264 100.0 28 0 0 16 43 353 326 4.03e-09 53