RefSeq NC_015518.1
DoriC accession number aORI10010103
OriC length 857 nt
OriC AT content 0.6663
The location of oriC region 731778..732634 nt
Browse in NCBI
OriC map
OriC sequences
TACAATATATGAATCGTAATAAAACTGCTTATAATAACTTTGCCTTAACCGGGGAGTAAAATACCCCTTTATTTCCACTGGAGGTTATAAGGGAAAAACAGGCACCCCTTTATTTCCACTGGAAAACTTAGGTTTTTAGTAACTAGAATATAAAGTTTGTATAATATACATGTTGCGCCTTTTAGTAGATATTTTCCAAGAGAAATAAAGGGGGAGAGACACTTAGATAGTTGAACTTATAAACCTAGATTTTAATTAGAATATTGGGCCGGTAGCTCAGCCTGGAAGAGTGTCCGGCTTGCAACCGGAAGGTCCCGGGTTCAAATCCCGGCCGGTCCACTCTGGGGGATACCCGCAGACCCCCATTACTAAGTAAGTTTCGATTATCTTATCTAAGGGGTCACTGTAACGCTCTCTTACGTTATCTTCTTTGTCCTTCTCTATTAAGTAAACATAATACTTCTTCCTTCTTTGACGAATCTTATATTGCCCAGCTGAGAAAACTTTATAACTCTGCCCATATTTATCATTTTGGACTATTTAAGGATTGTTAATTATCATATCAGACGTTGAGTAAAAAGGCGGTGATAATAATTCCGCAGTTATACAAAAATCATGTTTCGATTAATTATTGTATACTAGAAATGTTAGATTATGTAAATTTTTATTAAATTATGAATTATCAAATATTAGGCAATAAGTAGAGTCTAAGTTACTTTATCCTTATTATTAAATTGGATCTTCTTCTTTCATTTATTTTATATCATTAAGTTGGGAGAAACTTGTAGCCATCTTTTCTTTAATGAAGTGTTTTATTAGTATATAAGTCGTATTTTTACCTAAAGTTCAAAATTCGC
TACAATATATGAATCGTAATAAAACTGCTTATAATAACTTTGCCTTAACCGGGGAGTAAAATACCCCTTTATTTCCACTGGAGGTTATAAGGGAAAAACAGGCACCCCTTTATTTCCACTGGAAAACTTAGGTTTTTAGTAACTAGAATATAAAGTTTGTATAATATACATGTTGCGCCTTTTAGTAGATATTTTCCAAGAGAAATAAAGGGGGAGAGACACTTAGATAGTTGAACTTATAAACCTAGATTTTAATTAGAATATTGGGCCGGTAGCTCAGCCTGGAAGAGTGTCCGGCTTGCAACCGGAAGGTCCCGGGTTCAAATCCCGGCCGGTCCACTCTGGGGGATACCCGCAGACCCCCATTACTAAGTAAGTTTCGATTATCTTATCTAAGGGGTCACTGTAACGCTCTCTTACGTTATCTTCTTTGTCCTTCTCTATTAAGTAAACATAATACTTCTTCCTTCTTTGACGAATCTTATATTGCCCAGCTGAGAAAACTTTATAACTCTGCCCATATTTATCATTTTGGACTATTTAAGGATTGTTAATTATCATATCAGACGTTGAGTAAAAAGGCGGTGATAATAATTCCGCAGTTATACAAAAATCATGTTTCGATTAATTATTGTATACTAGAAATGTTAGATTATGTAAATTTTTATTAAATTATGAATTATCAAATATTAGGCAATAAGTAGAGTCTAAGTTACTTTATCCTTATTATTAAATTGGATCTTCTTCTTTCATTTATTTTATATCATTAAGTTGGGAGAAACTTGTAGCCATCTTTTCTTTAATGAAGTGTTTTATTAGTATATAAGTCGTATTTTTACCTAAAGTTCAAAATTCGC
TACAATATATGAATCGTAATAAAACTGCTTATAATAACTTTGCCTTAACCGGGGAGTAAAATACCCCTTTATTTCCACTGGAGGTTATAAGGGAAAAACAGGCACCCCTTTATTTCCACTGGAAAACTTAGGTTTTTAGTAACTAGAATATAAAGTTTGTATAATATACATGTTGCGCCTTTTAGTAGATATTTTCCAAGAGAAATAAAGGGGGAGAGACACTTAGATAGTTGAACTTATAAACCTAGATTTTAATTAGAATATTGGGCCGGTAGCTCAGCCTGGAAGAGTGTCCGGCTTGCAACCGGAAGGTCCCGGGTTCAAATCCCGGCCGGTCCACTCTGGGGGATACCCGCAGACCCCCATTACTAAGTAAGTTTCGATTATCTTATCTAAGGGGTCACTGTAACGCTCTCTTACGTTATCTTCTTTGTCCTTCTCTATTAAGTAAACATAATACTTCTTCCTTCTTTGACGAATCTTATATTGCCCAGCTGAGAAAACTTTATAACTCTGCCCATATTTATCATTTTGGACTATTTAAGGATTGTTAATTATCATATCAGACGTTGAGTAAAAAGGCGGTGATAATAATTCCGCAGTTATACAAAAATCATGTTTCGATTAATTATTGTATACTAGAAATGTTAGATTATGTAAATTTTTATTAAATTATGAATTATCAAATATTAGGCAATAAGTAGAGTCTAAGTTACTTTATCCTTATTATTAAATTGGATCTTCTTCTTTCATTTATTTTATATCATTAAGTTGGGAGAAACTTGTAGCCATCTTTTCTTTAATGAAGTGTTTTATTAGTATATAAGTCGTATTTTTACCTAAAGTTCAAAATTCGC
ORB     AT-rich region
The information of repeat sequences

Motif GGGAGAAACHBGHAGVYMYY

StartP-valueSite
3445.91e-12GGTCCACTCTGGGGGATACCCGCAGACCCCCATTACTAAG
7741.11e-09TCATTAAGTTGGGAGAAACTTGTAGCCATCTTTTCTTTAA
911.75e-09GAGGTTATAAGGGAAAAACAGGCACCCCTTTATTTCCACT
2972.20e-08AGAGTGTCCGGCTTGCAACCGGAAGGTCCCGGGTTCAAAT
2122.20e-08GAAATAAAGGGGGAGAGACACTTAGATAGTTGAACTTATA

Motif GGCCGG

StartP-valueSite
3302.20e-05TTCAAATCCCGGCCGGTCCACTCTGG
2672.20e-05TAGAATATTGGGCCGGTAGCTCAGCC

Motif CCACTGGA

StartP-valueSite
1164.40e-06CCCTTTATTTCCACTGGAAAACTTAGGT
754.40e-06CCCTTTATTTCCACTGGAGGTTATAAGG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010103 100.0 857 0 0 1 857 1 857 0.0 1583
aORI10010264 79.842 253 40 9 257 502 316 564 7.00649e-45 174
aORI10010100 92.5 80 5 1 260 339 717 639 1.41e-26 113
aORI10010013 92.405 79 6 0 265 343 113 191 1.41e-26 113
aORI10010359 92.105 76 6 0 266 341 455 530 6.56e-25 108
aORI10010337 92.105 76 6 0 266 341 455 530 6.56e-25 108
aORI10010334 92.105 76 6 0 266 341 455 530 6.56e-25 108
aORI10010331 92.105 76 6 0 266 341 455 530 6.56e-25 108
aORI10010110 92.105 76 6 0 266 341 455 530 6.56e-25 108
aORI10010010 92.105 76 6 0 266 341 455 530 6.56e-25 108
aORI10010343 90.123 81 8 0 261 341 108 28 2.36e-24 106
aORI10010342 90.123 81 8 0 261 341 108 28 2.36e-24 106
aORI10010341 90.123 81 8 0 261 341 108 28 2.36e-24 106
aORI10010340 90.123 81 8 0 261 341 108 28 2.36e-24 106
aORI10010339 90.123 81 8 0 261 341 108 28 2.36e-24 106
aORI10010269 92.0 75 6 0 266 340 78 4 2.36e-24 106
aORI10010117 92.0 75 6 0 266 340 78 4 2.36e-24 106
aORI10010114 92.0 75 6 0 266 340 78 4 2.36e-24 106
aORI10010089 92.0 75 6 0 266 340 78 4 2.36e-24 106
aORI10010077 92.0 75 6 0 266 340 78 4 2.36e-24 106
aORI10010074 92.0 75 6 0 266 340 78 4 2.36e-24 106
aORI10010071 92.0 75 6 0 266 340 310 384 2.36e-24 106
aORI10010068 92.0 75 6 0 266 340 78 4 2.36e-24 106
aORI10010065 92.0 75 6 0 266 340 78 4 2.36e-24 106
aORI10010062 92.0 75 6 0 266 340 78 4 2.36e-24 106
aORI10010043 90.123 81 8 0 261 341 108 28 2.36e-24 106
aORI10010099 90.667 75 7 0 265 339 500 574 1.1e-22 100
aORI10010099 80.851 94 3 6 265 343 167 260 1.86e-10 60
aORI10010384 89.474 76 8 0 265 340 374 299 1.42e-21 97
aORI10010356 86.667 90 8 4 257 343 317 405 1.42e-21 97
aORI10010353 86.667 90 8 4 257 343 317 405 1.42e-21 97
aORI10010350 86.667 90 8 4 257 343 317 405 1.42e-21 97
aORI10010347 86.667 90 8 4 257 343 317 405 1.42e-21 97
aORI10010344 86.667 90 8 4 257 343 317 405 1.42e-21 97
aORI10010196 86.667 90 8 4 257 343 317 405 1.42e-21 97
aORI10010193 86.667 90 8 4 257 343 317 405 1.42e-21 97
aORI10010024 86.667 90 8 4 257 343 317 405 1.42e-21 97
aORI10010368 89.189 74 8 0 266 339 124 197 1.84e-20 94
aORI10010363 89.394 66 6 1 254 318 459 524 3.98e-17 82
aORI10010357 93.023 43 3 0 265 307 43 1 1.44e-11 64
aORI10010354 93.023 43 3 0 265 307 43 1 1.44e-11 64
aORI10010351 93.023 43 3 0 265 307 43 1 1.44e-11 64
aORI10010348 93.023 43 3 0 265 307 43 1 1.44e-11 64
aORI10010345 93.023 43 3 0 265 307 43 1 1.44e-11 64