RefSeq NC_012588.1
DoriC accession number aORI10010062
OriC length 386 nt
OriC AT content 0.6192
The location of oriC region 1724715..1725100 nt
Browse in NCBI
OriC map
OriC sequences
AAGGTGGACCGGCCGGGATTTGAACCCGGGACCTCTCGGGTGCAAACCGAGCACTCTTCCAGGCTGAGCTACCGGCCCTTGAGTAAAAATAAAGACAAGGATAGATTAAAAATTTTACCTGTTCATATCTTCAGCGACACCCCTTCGGTTCCATTGGAGATTAATTTGAGCAACATTTTGTTATAATTAGATAACCATTATACAAAAGAATTGTATAAGAATGAAATCAAAGCTTATTTTATGTCACTAGAATCTCCAAATGAAATACTGGGGTAGGCCTTGTATATGACACAACTTACATTTTCCAGTGGAAATAAAGGGGTTTTTTACTCCCCAGTTAAATAGCTTATATTTTAAAAGCTGGGTTAGCACAAACAATAGAAAAG
AAGGTGGACCGGCCGGGATTTGAACCCGGGACCTCTCGGGTGCAAACCGAGCACTCTTCCAGGCTGAGCTACCGGCCCTTGAGTAAAAATAAAGACAAGGATAGATTAAAAATTTTACCTGTTCATATCTTCAGCGACACCCCTTCGGTTCCATTGGAGATTAATTTGAGCAACATTTTGTTATAATTAGATAACCATTATACAAAAGAATTGTATAAGAATGAAATCAAAGCTTATTTTATGTCACTAGAATCTCCAAATGAAATACTGGGGTAGGCCTTGTATATGACACAACTTACATTTTCCAGTGGAAATAAAGGGGTTTTTTACTCCCCAGTTAAATAGCTTATATTTTAAAAGCTGGGTTAGCACAAACAATAGAAAAG
AAGGTGGACCGGCCGGGATTTGAACCCGGGACCTCTCGGGTGCAAACCGAGCACTCTTCCAGGCTGAGCTACCGGCCCTTGAGTAAAAATAAAGACAAGGATAGATTAAAAATTTTACCTGTTCATATCTTCAGCGACACCCCTTCGGTTCCATTGGAGATTAATTTGAGCAACATTTTGTTATAATTAGATAACCATTATACAAAAGAATTGTATAAGAATGAAATCAAAGCTTATTTTATGTCACTAGAATCTCCAAATGAAATACTGGGGTAGGCCTTGTATATGACACAACTTACATTTTCCAGTGGAAATAAAGGGGTTTTTTACTCCCCAGTTAAATAGCTTATATTTTAAAAGCTGGGTTAGCACAAACAATAGAAAAG
ORB     AT-rich region
The information of repeat sequences

Motif CCGGCC

StartP-valueSite
724.65e-05GGCTGAGCTACCGGCCCTTGAGTAAA
94.65e-05AAGGTGGACCGGCCGGGATTTGAA

Motif SCGRSMMCYCTYSSRKKC

StartP-valueSite
266.71e-11GGATTTGAACCCGGGACCTCTCGGGTGCAAACCGAGCA
1348.29e-10CATATCTTCAGCGACACCCCTTCGGTTCCATTGGAGAT
472.05e-09CGGGTGCAAACCGAGCACTCTTCCAGGCTGAGCTACCG

Motif KAAATAMWRGGDTAK

StartP-valueSite
2622.16e-09ATCTCCAAATGAAATACTGGGGTAGGCCTTGTATA
3117.91e-07TTTTCCAGTGGAAATAAAGGGGTTTTTTACTCCCC
3559.41e-07GCTTATATTTTAAAAGCTGGGTTAGCACAAACAAT
901.60e-06TGAGTAAAAATAAAGACAAGGATAGATTAAAAATT
2234.41e-06GTATAAGAATGAAATCAAAGCTTATTTTATGTCAC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010077 100.0 386 0 0 1 386 1 386 0.0 713
aORI10010062 100.0 386 0 0 1 386 1 386 0.0 713
aORI10010114 99.741 386 1 0 1 386 1 386 0.0 708
aORI10010089 99.741 386 1 0 1 386 1 386 0.0 708
aORI10010074 99.741 386 1 0 1 386 1 386 0.0 708
aORI10010065 99.741 386 1 0 1 386 1 386 0.0 708
aORI10010117 99.482 386 2 0 1 386 1 386 0.0 702
aORI10010068 99.482 386 2 0 1 386 1 386 0.0 702
aORI10010269 99.223 386 3 0 1 386 1 386 0.0 697
aORI10010071 99.225 387 2 1 1 386 387 1 0.0 697
aORI10010359 93.846 130 6 2 4 131 529 400 0.0 195
aORI10010359 77.457 173 23 13 185 344 212 43 1.04e-19 90
aORI10010337 93.846 130 6 2 4 131 529 400 0.0 195
aORI10010337 77.457 173 23 13 185 344 212 43 1.04e-19 90
aORI10010334 93.846 130 6 2 4 131 529 400 0.0 195
aORI10010334 77.457 173 23 13 185 344 212 43 1.04e-19 90
aORI10010331 93.846 130 6 2 4 131 529 400 0.0 195
aORI10010331 77.457 173 23 13 185 344 212 43 1.04e-19 90
aORI10010110 93.846 130 6 2 4 131 529 400 0.0 195
aORI10010110 77.457 173 23 13 185 344 212 43 1.04e-19 90
aORI10010010 93.846 130 6 2 4 131 529 400 0.0 195
aORI10010010 77.457 173 23 13 185 344 212 43 1.04e-19 90
aORI10010013 95.122 82 3 1 1 81 192 111 2.21e-31 128
aORI10010384 96.053 76 3 0 3 78 298 373 2.86e-30 124
aORI10010264 96.0 75 3 0 4 78 401 327 1.03e-29 122
aORI10010368 95.946 74 3 0 5 78 197 124 3.7e-29 121
aORI10010343 94.667 75 4 0 4 78 29 103 4.79e-28 117
aORI10010342 94.667 75 4 0 4 78 29 103 4.79e-28 117
aORI10010341 94.667 75 4 0 4 78 29 103 4.79e-28 117
aORI10010340 94.667 75 4 0 4 78 29 103 4.79e-28 117
aORI10010339 94.667 75 4 0 4 78 29 103 4.79e-28 117
aORI10010043 94.667 75 4 0 4 78 29 103 4.79e-28 117
aORI10010100 94.595 74 4 0 5 78 639 712 1.72e-27 115
aORI10010099 93.243 74 5 0 5 78 574 501 8.02e-26 110
aORI10010356 91.139 79 6 1 1 78 406 328 1.04e-24 106
aORI10010353 91.139 79 6 1 1 78 406 328 1.04e-24 106
aORI10010350 91.139 79 6 1 1 78 406 328 1.04e-24 106
aORI10010347 91.139 79 6 1 1 78 406 328 1.04e-24 106
aORI10010344 91.139 79 6 1 1 78 406 328 1.04e-24 106
aORI10010196 91.139 79 6 1 1 78 406 328 1.04e-24 106
aORI10010193 91.139 79 6 1 1 78 406 328 1.04e-24 106
aORI10010103 92.0 75 6 0 4 78 340 266 1.04e-24 106
aORI10010024 91.139 79 6 1 1 78 406 328 1.04e-24 106
aORI10010363 96.226 53 2 0 26 78 524 472 3.76e-19 88
aORI10010357 91.304 46 3 1 37 81 1 46 2.28e-11 62
aORI10010354 91.304 46 3 1 37 81 1 46 2.28e-11 62
aORI10010351 91.304 46 3 1 37 81 1 46 2.28e-11 62
aORI10010348 91.304 46 3 1 37 81 1 46 2.28e-11 62
aORI10010345 91.304 46 3 1 37 81 1 46 2.28e-11 62