RefSeq NC_020246.1
DoriC accession number aORI10010193
OriC length 766 nt
OriC AT content 0.6188
The location of oriC region 579361..580126 nt
Browse in NCBI
OriC map
OriC sequences
TGCTTATATTATAACGAGAGAATATTTTATAACAATTAACCCCCCGGTAAATCACCCCTTTATTTCAACTGGAAAACTAATGGTATTATGAATACTACCTGCCCCTTCATTTCAACTGGAAATAAAGCTACATCTAACTACTAACTTAAAATAACGGTTTGTATAATTTAGTTTTATTTATGTCACTAGTTCGTGTTTTATTTTTATGTAAATAATTGGTGTTCATATTTTATTTTTAGATATATGTCTCCAGTGGAACTAAAGGGGTCTCTGGTTTTGGATTAAGGCGATAAAAAATTAATATCAGTGATCTACGTAGTATATTGTGGGCCGGTAGCTCAGCCTGGAAGAGTGCGTGGTTGGCATCCACGAGGTCCCGGGTTCAAATCCCGGCCGGTCCACTCTTTTGTACTACTCCTTACGGTAGTCCTCTAATATAGAGTGCGCATTTCGAAACTGGCTCTGCACCACCGTTTATTCCGTGTAGCCAGAAAGTTCCTTTCACAGCAGATTTTGATTACTAGACGCTTACGCTTATTTCCTAAAGATAAGGAGCTAGAAAGGAGTACGAGAGTGTGCTAGGCTAAGTCGAGAGCAGGAAAAGGGGATCCGACTAGGCTCGTAATTGCGCAAGGCCATACGAGTTCTGGAAGATATTGCTCGTTGAATATTGAAAGTACCACTACTATTAAGTCAAAACTGTACTACAATATTAGATATTATGAAAACATTCTTAAATCATTGAACTAGTCAAACTTGTGGTATC
TGCTTATATTATAACGAGAGAATATTTTATAACAATTAACCCCCCGGTAAATCACCCCTTTATTTCAACTGGAAAACTAATGGTATTATGAATACTACCTGCCCCTTCATTTCAACTGGAAATAAAGCTACATCTAACTACTAACTTAAAATAACGGTTTGTATAATTTAGTTTTATTTATGTCACTAGTTCGTGTTTTATTTTTATGTAAATAATTGGTGTTCATATTTTATTTTTAGATATATGTCTCCAGTGGAACTAAAGGGGTCTCTGGTTTTGGATTAAGGCGATAAAAAATTAATATCAGTGATCTACGTAGTATATTGTGGGCCGGTAGCTCAGCCTGGAAGAGTGCGTGGTTGGCATCCACGAGGTCCCGGGTTCAAATCCCGGCCGGTCCACTCTTTTGTACTACTCCTTACGGTAGTCCTCTAATATAGAGTGCGCATTTCGAAACTGGCTCTGCACCACCGTTTATTCCGTGTAGCCAGAAAGTTCCTTTCACAGCAGATTTTGATTACTAGACGCTTACGCTTATTTCCTAAAGATAAGGAGCTAGAAAGGAGTACGAGAGTGTGCTAGGCTAAGTCGAGAGCAGGAAAAGGGGATCCGACTAGGCTCGTAATTGCGCAAGGCCATACGAGTTCTGGAAGATATTGCTCGTTGAATATTGAAAGTACCACTACTATTAAGTCAAAACTGTACTACAATATTAGATATTATGAAAACATTCTTAAATCATTGAACTAGTCAAACTTGTGGTATC
TGCTTATATTATAACGAGAGAATATTTTATAACAATTAACCCCCCGGTAAATCACCCCTTTATTTCAACTGGAAAACTAATGGTATTATGAATACTACCTGCCCCTTCATTTCAACTGGAAATAAAGCTACATCTAACTACTAACTTAAAATAACGGTTTGTATAATTTAGTTTTATTTATGTCACTAGTTCGTGTTTTATTTTTATGTAAATAATTGGTGTTCATATTTTATTTTTAGATATATGTCTCCAGTGGAACTAAAGGGGTCTCTGGTTTTGGATTAAGGCGATAAAAAATTAATATCAGTGATCTACGTAGTATATTGTGGGCCGGTAGCTCAGCCTGGAAGAGTGCGTGGTTGGCATCCACGAGGTCCCGGGTTCAAATCCCGGCCGGTCCACTCTTTTGTACTACTCCTTACGGTAGTCCTCTAATATAGAGTGCGCATTTCGAAACTGGCTCTGCACCACCGTTTATTCCGTGTAGCCAGAAAGTTCCTTTCACAGCAGATTTTGATTACTAGACGCTTACGCTTATTTCCTAAAGATAAGGAGCTAGAAAGGAGTACGAGAGTGTGCTAGGCTAAGTCGAGAGCAGGAAAAGGGGATCCGACTAGGCTCGTAATTGCGCAAGGCCATACGAGTTCTGGAAGATATTGCTCGTTGAATATTGAAAGTACCACTACTATTAAGTCAAAACTGTACTACAATATTAGATATTATGAAAACATTCTTAAATCATTGAACTAGTCAAACTTGTGGTATC
ORB     AT-rich region
The information of repeat sequences

Motif CCCTTHATTBCRHVTGGMMA

StartP-valueSite
566.81e-11GGTAAATCACCCCTTTATTTCAACTGGAAAACTAATGGTA
1039.63e-11TACTACCTGCCCCTTCATTTCAACTGGAAATAAAGCTACA
4714.86e-09CTCTGCACCACCGTTTATTCCGTGTAGCCAGAAAGTTCCT
6191.03e-08TCCGACTAGGCTCGTAATTGCGCAAGGCCATACGAGTTCT

Motif CCSSCCGG

StartP-valueSite
401.51e-06TAACAATTAACCCCCCGGTAAATCACCC
3906.46e-06GGTTCAAATCCCGGCCGGTCCACTCTTT

Motif CGAGAG

StartP-valueSite
5901.24e-04TAGGCTAAGTCGAGAGCAGGAAAAGG
5691.24e-04GAAAGGAGTACGAGAGTGTGCTAGGC
151.24e-04TATATTATAACGAGAGAATATTTTAT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010356 100.0 766 0 0 1 766 1 766 0.0 1415
aORI10010353 100.0 766 0 0 1 766 1 766 0.0 1415
aORI10010350 100.0 766 0 0 1 766 1 766 0.0 1415
aORI10010347 100.0 766 0 0 1 766 1 766 0.0 1415
aORI10010344 100.0 766 0 0 1 766 1 766 0.0 1415
aORI10010196 100.0 766 0 0 1 766 1 766 0.0 1415
aORI10010193 100.0 766 0 0 1 766 1 766 0.0 1415
aORI10010024 100.0 766 0 0 1 766 1 766 0.0 1415
aORI10010264 91.811 403 32 1 1 403 1 402 0.0 560
aORI10010343 97.403 77 2 0 327 403 104 28 3.47e-32 132
aORI10010342 97.403 77 2 0 327 403 104 28 3.47e-32 132
aORI10010341 97.403 77 2 0 327 403 104 28 3.47e-32 132
aORI10010340 97.403 77 2 0 327 403 104 28 3.47e-32 132
aORI10010339 97.403 77 2 0 327 403 104 28 3.47e-32 132
aORI10010043 97.403 77 2 0 327 403 104 28 3.47e-32 132
aORI10010099 94.805 77 4 0 325 401 498 574 7.51e-29 121
aORI10010099 97.368 38 0 1 371 407 225 262 1.28e-11 64
aORI10010384 93.421 76 5 0 327 402 374 299 1.26e-26 113
aORI10010368 93.243 74 5 0 328 401 124 197 1.63e-25 110
aORI10010013 91.25 80 7 0 327 406 113 192 1.63e-25 110
aORI10010359 92.105 76 6 0 328 403 455 530 5.85e-25 108
aORI10010337 92.105 76 6 0 328 403 455 530 5.85e-25 108
aORI10010334 92.105 76 6 0 328 403 455 530 5.85e-25 108
aORI10010331 92.105 76 6 0 328 403 455 530 5.85e-25 108
aORI10010110 92.105 76 6 0 328 403 455 530 5.85e-25 108
aORI10010010 92.105 76 6 0 328 403 455 530 5.85e-25 108
aORI10010269 91.139 79 6 1 328 406 78 1 2.1e-24 106
aORI10010117 91.139 79 6 1 328 406 78 1 2.1e-24 106
aORI10010114 91.139 79 6 1 328 406 78 1 2.1e-24 106
aORI10010100 92.0 75 6 0 327 401 713 639 2.1e-24 106
aORI10010089 91.139 79 6 1 328 406 78 1 2.1e-24 106
aORI10010077 91.139 79 6 1 328 406 78 1 2.1e-24 106
aORI10010074 91.139 79 6 1 328 406 78 1 2.1e-24 106
aORI10010071 91.139 79 6 1 328 406 310 387 2.1e-24 106
aORI10010068 91.139 79 6 1 328 406 78 1 2.1e-24 106
aORI10010065 91.139 79 6 1 328 406 78 1 2.1e-24 106
aORI10010062 91.139 79 6 1 328 406 78 1 2.1e-24 106
aORI10010103 86.667 90 8 4 317 405 257 343 1.27e-21 97
aORI10010363 85.714 63 8 1 318 380 463 524 3.57e-12 66
aORI10010357 94.595 37 1 1 327 362 43 7 2.15e-09 57
aORI10010354 94.595 37 1 1 327 362 43 7 2.15e-09 57
aORI10010351 94.595 37 1 1 327 362 43 7 2.15e-09 57
aORI10010348 94.595 37 1 1 327 362 43 7 2.15e-09 57
aORI10010345 94.595 37 1 1 327 362 43 7 2.15e-09 57