Basic Information

Assembly acc GCF_016756275.1
Acc NZ_AP024258.1
OriID ORI97207504
Organism Mycobacterium paraintracellulare
Topology Circular
Lineage Bacteria ; Bacillati ; Actinomycetota ; Actinomycetes ; Mycobacteriales ; Mycobacteriaceae ; Mycobacterium ; Mycobacterium paraintracellulare
Assembly Level Complete
Literature linkage Not linked
Chromosome size 5429978 nt
Chromosome GC content 68.04%
Indicator genes
  • dnaA      101... 1636nt
  • dnaN      2172... 3371nt
  • hemE      3578792... 3579865nt
  • hemB      4775890... 4776879nt
  • rpmH      5429333... 5429476nt
OriC location
  • 1637 ... 2171 nt
OriC Length
  • 535 nt
OriC AT Content
  • 0.3813

Comparative Sequence Support

Recurrence category Cross-taxon
Sequence cluster BC-OH000082
Cluster members 132
Distinct accessions 132
Species / genera 7 / 1
Literature-linked members 0

Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.

Top 10 most similar Ori IDs

Rank Ori ID Accession Organism Identity Reciprocal coverage Literature linkage
1 ORI97207494 NZ_AP024251.1 Mycobacterium paraintracellulare 100.00% 100.00% Not linked
2 ORI97207502 NZ_AP024257.1 Mycobacterium paraintracellulare 100.00% 100.00% Not linked
3 ORI97207500 NZ_AP024255.1 Mycobacterium intracellulare 99.60% 100.00% Not linked
4 ORI97207506 NZ_AP024259.1 Mycobacterium paraintracellulare 99.60% 100.00% Not linked
5 ORI97227812 NZ_CP023149.1 Mycobacterium intracellulare 99.60% 100.00% Not linked
6 ORI97255259 NZ_CP089220.1 Mycobacterium intracellulare 99.60% 100.00% Not linked
7 ORI97257007 NZ_CP076380.2 Mycobacterium intracellulare 99.60% 100.00% Not linked
8 ORI97257009 NZ_CP076381.2 Mycobacterium intracellulare 99.20% 100.00% Not linked
9 ORI97207480 NZ_AP024241.1 Mycobacterium intracellulare 98.80% 100.00% Not linked
10 ORI97207482 NZ_AP024243.1 Mycobacterium paraintracellulare 98.80% 100.00% Not linked

The interactive Z-curves rotated at the maximum of the GC disparity.

RIP Sequence-Similarity Network

Bacteria Chromosomes 1,537 RIP sequence subfamilies from 66,403 proteins (Complete/Chromosome only) Accession: NZ_AP024258.1
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Replication Initiation Protein Information

Gene Start Gene End Translation
101 1636 MTDDPGSGFTTVWNAVVSEL...

OriC Visualization

OriC map
OriC sequences
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCATTCAAACTGCGGTGCAGTACCGGGCGTTCCGTGCACACCGGTCGTTCGTCCCCACCGGACCAACACCTGACTCACAGGCGCCACCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCCCGCCGAGCCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCATTCAAACTGCGGTGCAGTACCGGGCGTTCCGTGCACACCGGTCGTTCGTCCCCACCGGACCAACACCTGACTCACAGGCGCCACCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCCCGCCGAGCCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCATTCAAACTGCGGTGCAGTACCGGGCGTTCCGTGCACACCGGTCGTTCGTCCCCACCGGACCAACACCTGACTCACAGGCGCCACCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCCCGCCGAGCCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCATTCAAACTGCGGTGCAGTACCGGGCGTTCCGTGCACACCGGTCGTTCGTCCCCACCGGACCAACACCTGACTCACAGGCGCCACCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCCCGCCGAGCCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCATTCAAACTGCGGTGCAGTACCGGGCGTTCCGTGCACACCGGTCGTTCGTCCCCACCGGACCAACACCTGACTCACAGGCGCCACCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCCCGCCGAGCCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCATTCAAACTGCGGTGCAGTACCGGGCGTTCCGTGCACACCGGTCGTTCGTCCCCACCGGACCAACACCTGACTCACAGGCGCCACCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCCCGCCGAGCCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCATTCAAACTGCGGTGCAGTACCGGGCGTTCCGTGCACACCGGTCGTTCGTCCCCACCGGACCAACACCTGACTCACAGGCGCCACCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCCCGCCGAGCCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCATTCAAACTGCGGTGCAGTACCGGGCGTTCCGTGCACACCGGTCGTTCGTCCCCACCGGACCAACACCTGACTCACAGGCGCCACCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCCCGCCGAGCCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCATTCAAACTGCGGTGCAGTACCGGGCGTTCCGTGCACACCGGTCGTTCGTCCCCACCGGACCAACACCTGACTCACAGGCGCCACCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCCCGCCGAGCCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCATTCAAACTGCGGTGCAGTACCGGGCGTTCCGTGCACACCGGTCGTTCGTCCCCACCGGACCAACACCTGACTCACAGGCGCCACCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCCCGCCGAGCCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCATTCAAACTGCGGTGCAGTACCGGGCGTTCCGTGCACACCGGTCGTTCGTCCCCACCGGACCAACACCTGACTCACAGGCGCCACCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCCCGCCGAGCCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
5'-DnaA box-3'    3'-DnaA box-5'   Spacer   DnaA-trio   ATP-DnaA box
AT-rich region   GATC   CtrA binding motif   Fis binding site   IHF binding site

BLAST Results

Subject ID Identity (%) Length Mismatches Gaps Query Start Query End Subject Start Subject End E-value Bit Score
ORI60040082 83.30% 527 70 15 19 535 51 569 0.0 470.0
ORI10040011 83.08% 520 70 15 26 535 58 569 0.0 457.0
Found 2 BLAST matches
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