ORI97207437 | DoriC 14.0: an updated database of prokaryotic replication origins with significantly expanded plasmid oriV annotations

Basic Information

Assembly acc	`GCF_010730745.1`
Acc	`NZ_AP022615.1`
OriID	ORI97207437
Organism	Mycobacterium heidelbergense
Topology	Linear
Lineage	Bacteria ; Bacillati ; Actinomycetota ; Actinomycetes ; Mycobacteriales ; Mycobacteriaceae ; Mycobacterium ; Mycobacterium heidelbergense
Assembly Level	Complete
Literature linkage	Not linked
Chromosome size	5050576 nt
Chromosome GC content	67.94%
Indicator genes	hemE 210782... 211852nt hemB 1372103... 1373092nt dnaN 2204689... 2205888nt dnaA 2206414... 2207943nt rpmH 2208554... 2208697nt
OriC location	2205889 ... 2206413 nt
OriC Length	525 nt
OriC AT Content	0.3981

Comparative Sequence Support

Recurrence category Singleton

Sequence cluster BC-OH007193

Cluster members 1

Distinct accessions 1

Species / genera 1 / 1

Literature-linked members 0

Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.

Top 10 most similar Ori IDs

Rank	Ori ID	Accession	Organism	Identity	Reciprocal coverage	Literature linkage
1	`ORI97209622`	`NZ_CP080999.1`	Mycobacterium malmoense	74.40%	97.10%	Not linked
2	`ORI97255910`	`NZ_CP060015.1`	Mycobacterium malmoense	74.40%	97.10%	Not linked
3	`ORI97261467`	`NZ_CP113529.1`	Mycobacterium sp. Aquia_216	73.60%	95.80%	Not linked
4	`ORI97275272`	`NZ_CP169059.1`	Mycobacterium hainanense	74.40%	87.70%	Not linked
5	`ORI97302367`	`NZ_OZ335668.1`	Mycobacterium sp. NTMscope_MAC_269	74.70%	85.90%	Not linked
6	`ORI97209974`	`NZ_CP092423.1`	Mycobacterium lentiflavum	72.60%	88.30%	Not linked
7	`ORI97207406`	`NZ_AP022584.1`	Mycobacterium marseillense	74.20%	85.40%	Not linked
8	`ORI97227811`	`NZ_CP023147.1`	Mycobacterium marseillense	74.20%	85.40%	Not linked
9	`ORI97020598`	`NZ_AP022582.1`	Mycobacterium seoulense	73.10%	86.60%	Not linked
10	`ORI97261291`	`NZ_CP113116.1`	Mycobacterium sp. Aquia_213	74.80%	84.30%	Not linked

The interactive Z-curves rotated at the maximum of the GC disparity.

RIP Sequence-Similarity Network

Replication Initiation Protein Information

Gene Start	Gene End	Translation
2206414	2207943	MTDDPGSGFTTVWNAVVSEL...

OriC Visualization

OriC map

OriC sequences

dnaNAGCGTCCCTTACTTGCCAAGTGAATCGAACAAGGCGGCTAGCGGTTCGTCGCTAGCACGCGGCCCCCGCAACGAACGTCGGTGACACGTCATGCGCCCCGACGCCGCAACAGCAGTCGAAGAACAACCGTAGATCTTCTGCGGCCATCTTCAAAGCTAATCGCGGAGGCCGACAAGCCAGGCCGACGACGGGTTTCGCCGCTGCCACGCAAGGAGCCTCCCCAGCGCTGTATTTCGGAGAAGAAACGACGGAGAGATCTCAGTAACAGTATTAAGTGCTGTGCATTCTGGGGACAGCCGGGTCTTGGCGCAGCTAGGGGCGTCATCGGGTTGTGGATGACGCGGTGAGCAACTGTGTGGGTTTTGCTGAGCGGCTGGGGATGGGGAGTGAGTGTGCACGTGAATCCCAGCGGTGCGCTCGTGTATGGCCGCCTTGTGCACAGGGCTGCACACAGCGCCGCGGGCGTGACTGATGTGACAGGGGTGGGAGAAGTTTTTTGAAAAATTGTGTCTTGGCCGGCGAGAGdnaA

dnanAGCGTCCCTTACTTGCCAAGTGAATCGAACAAGGCGGCTAGCGGTTCGTCGCTAGCACGCGGCCCCCGCAACGAACGTCGGTGACACGTCATGCGCCCCGACGCCGCAACAGCAGTCGAAGAACAACCGTAGATCTTCTGCGGCCATCTTCAAAGCTAATCGCGGAGGCCGACAAGCCAGGCCGACGACGGGTTTCGCCGCTGCCACGCAAGGAGCCTCCCCAGCGCTGTATTTCGGAGAAGAAACGACGGAGAGATCTCAGTAACAGTATTAAGTGCTGTGCATTCTGGGGACAGCCGGGTCTTGGCGCAGCTAGGGGCGTCATCGGGTTGTGGATGACGCGGTGAGCAACTGTGTGGGTTTTGCTGAGCGGCTGGGGATGGGGAGTGAGTGTGCACGTGAATCCCAGCGGTGCGCTCGTGTATGGCCGCCTTGTGCACAGGGCTGCACACAGCGCCGCGGGCGTGACTGATGTGACAGGGGTGGGAGAAGTTTTTTGAAAAATTGTGTCTTGGCCGGCGAGAGdnaa

5'-DnaA box-3' 3'-DnaA box-5' Spacer DnaA-trio ATP-DnaA box
AT-rich region GATC CtrA binding motif Fis binding site IHF binding site

BLAST Results

There are no BLAST results available for this genome.

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