RefSeq NC_014104
DoriC accession number pORI00000155
OriC length 893 nt
OriC AT content 0.6013
The location of oriC region 494..1386 nt
Browse in NCBI
OriC map
OriC sequences
GGAAAATTTAAGGCCTAAATGGGGCGGACTCTTAGAGTCTGCTTTTTTTTATTGCAAAAATCGTTTTAAAGCCTTTTAAGGCGTTTTATTGGGTTCCCTTTATAAAAGGGGGCGTTTTTTATTTAAAGCCCGTAGAAACGAATCTGAGCATTCTGAGGACGCCTTTAGGTATGTAGATTAGCTGTTCACCTTTTTTAAGTAGCGAGTAGCGGAGTGCCAACTTACATTCCCTGAAAGTAAGGGGGTATTGTCCTACAGGGAAACACCATCTTTACCTACAGGGAAAGATGTATTGCCCTACAGGGAAAGACAATTACAGAGATTACTACAGAGATTACTACAGAGATTGAAAAGAATATACGCGCAAAAACACGCGCTAGTGAATATTCGGATCAGCACCTGGTCAAAGGCTGCTCGTTTTTTCGCGCCGGCGAAATAAATAATGCTACGCATTTGACCATGGCTGGATGTGTTGACTGCGTGTTGATAGAAAAGGCCATGTGTTGACTGTGTGGAGGTTTATGTGTTGGTCATGTGGAGACGTGCGGTTTTTTAAAGATATTGAATATCTAAAATAATGCGCGGCTGCAGGGCCGATTTTTTGAAAAAAATCTCCCCCTATGGGGGAAGAATGGTTTTGATCTTAGGTTTTGGGTTTTAAAAAAAGACCGGCAATTCTGCCGGCCTTTTTTACGATTTTGACGGAGTCGAAATCGGGTCTTTTCTTATCTTGATACTATATAGAAACAACAAGATTTTAAAAAAACATGCTCAGCCCTTATATGTCAAGGGTTCGAGTGAATTTTGACAGATAAAAACTCCTTCTGCTATTATTGAGTTACCACACTTAACAATAGAATGCTAGATTACTAGCTCAGAAGGAGTTTTTCATT
GGAAAATTTAAGGCCTAAATGGGGCGGACTCTTAGAGTCTGCTTTTTTTTATTGCAAAAATCGTTTTAAAGCCTTTTAAGGCGTTTTATTGGGTTCCCTTTATAAAAGGGGGCGTTTTTTATTTAAAGCCCGTAGAAACGAATCTGAGCATTCTGAGGACGCCTTTAGGTATGTAGATTAGCTGTTCACCTTTTTTAAGTAGCGAGTAGCGGAGTGCCAACTTACATTCCCTGAAAGTAAGGGGGTATTGTCCTACAGGGAAACACCATCTTTACCTACAGGGAAAGATGTATTGCCCTACAGGGAAAGACAATTACAGAGATTACTACAGAGATTACTACAGAGATTGAAAAGAATATACGCGCAAAAACACGCGCTAGTGAATATTCGGATCAGCACCTGGTCAAAGGCTGCTCGTTTTTTCGCGCCGGCGAAATAAATAATGCTACGCATTTGACCATGGCTGGATGTGTTGACTGCGTGTTGATAGAAAAGGCCATGTGTTGACTGTGTGGAGGTTTATGTGTTGGTCATGTGGAGACGTGCGGTTTTTTAAAGATATTGAATATCTAAAATAATGCGCGGCTGCAGGGCCGATTTTTTGAAAAAAATCTCCCCCTATGGGGGAAGAATGGTTTTGATCTTAGGTTTTGGGTTTTAAAAAAAGACCGGCAATTCTGCCGGCCTTTTTTACGATTTTGACGGAGTCGAAATCGGGTCTTTTCTTATCTTGATACTATATAGAAACAACAAGATTTTAAAAAAACATGCTCAGCCCTTATATGTCAAGGGTTCGAGTGAATTTTGACAGATAAAAACTCCTTCTGCTATTATTGAGTTACCACACTTAACAATAGAATGCTAGATTACTAGCTCAGAAGGAGTTTTTCATT
AT-rich region
The information of repeat sequences

Motif THTTBCCCTACRGGGAAAGA

StartP-valueSite
2913.57e-12GGGAAAGATGTATTGCCCTACAGGGAAAGACAATTACAGA
2695.57e-11GGAAACACCATCTTTACCTACAGGGAAAGATGTATTGCCC
2462.70e-10AGTAAGGGGGTATTGTCCTACAGGGAAACACCATCTTTAC
6121.16e-09TTGAAAAAAATCTCCCCCTATGGGGGAAGAATGGTTTTGA
4199.14e-09GGCTGCTCGTTTTTTCGCGCCGGCGAAATAAATAATGCTA

Motif YTACAGAGATT

StartP-valueSite
3383.22e-07ACAGAGATTACTACAGAGATTGAAAAGAATA
3263.22e-07ACAGAGATTACTACAGAGATTACTACAGAGA
3149.15e-07GGAAAGACAATTACAGAGATTACTACAGAGA
5535.86e-06GTGCGGTTTTTTAAAGATATTGAATATCTAA

Motif ATGTGTTGRYYRYGTGKWG

StartP-valueSite
4999.23e-12AGAAAAGGCCATGTGTTGACTGTGTGGAGGTTTATGTGT
4682.95e-10CCATGGCTGGATGTGTTGACTGCGTGTTGATAGAAAAGG
5227.08e-10GTGGAGGTTTATGTGTTGGTCATGTGGAGACGTGCGGTT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000155 100.0 893 0 0 1 893 1 893 0.0 1650
pORI00000167 83.39 295 38 10 602 889 3 293 0.0 263
pORI00000164 81.457 302 43 11 594 889 894 1188 0.0 235
pORI00000160 78.738 301 49 13 593 888 294 4 0.0 187
pORI00000168 77.926 299 49 8 608 892 297 2 2.95674e-43 171
pORI00000158 81.463 205 32 5 687 887 211 9 4.94e-41 163
pORI00000220 100.0 29 0 0 722 750 252 280 3.1e-08 55