RefSeq NC_002075
DoriC accession number pORI00000167
OriC length 298 nt
OriC AT content 0.6208
The location of oriC region 7818..166 nt
Browse in NCBI
OriC map
OriC sequences
AGTTGAAAAAAATCTCCCCCCTGTGGGGGAAGAATGGTTTTGATCTTTGGGTTTTAGGTTTTAAAAAAGCCGGCTGTTTTCAGCCGGCTTTTTTTCGATTTTGGCGGAGCCGAAATCGGGTCTTTTCTTATCTTGATACTATATAGAAACACCAAGATTTTTTAAAATCGGTTTAAAGCCTTGCGTGTCAAGGCTTTAAAGTGTTTTTGACAGATAAAAACTCCTTCTGCTATTATTAGGGTGTCGAAGCCAAATAATAGAACGCTAGATTACTAGCACAGAAAGGAGTTTTTTTCGT
AGTTGAAAAAAATCTCCCCCCTGTGGGGGAAGAATGGTTTTGATCTTTGGGTTTTAGGTTTTAAAAAAGCCGGCTGTTTTCAGCCGGCTTTTTTTCGATTTTGGCGGAGCCGAAATCGGGTCTTTTCTTATCTTGATACTATATAGAAACACCAAGATTTTTTAAAATCGGTTTAAAGCCTTGCGTGTCAAGGCTTTAAAGTGTTTTTGACAGATAAAAACTCCTTCTGCTATTATTAGGGTGTCGAAGCCAAATAATAGAACGCTAGATTACTAGCACAGAAAGGAGTTTTTTTCGT
AT-rich region
The information of repeat sequences

Motif AAAAACDCC

StartP-valueSite
2162.30e-06TTTGACAGATAAAAACTCCTTCTGCTATT
91.15e-05AGTTGAAAAAAATCTCCCCCCTGTGGG
1451.29e-05GATACTATATAGAAACACCAAGATTTTTT
632.35e-05TTTAGGTTTTAAAAAAGCCGGCTGTTTTC

Motif CGRAGCC

StartP-valueSite
1051.23e-05TCGATTTTGGCGGAGCCGAAATCGGGT
2452.77e-05ATTAGGGTGTCGAAGCCAAATAATAGA

Motif AAATCGG

StartP-valueSite
1655.56e-05AGATTTTTTAAAATCGGTTTAAAGCCT
1135.56e-05GGCGGAGCCGAAATCGGGTCTTTTCTT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000167 100.0 298 0 0 1 298 1 298 0.0 551
pORI00000164 83.618 293 37 10 6 295 906 1190 0.0 265
pORI00000155 83.39 295 38 10 3 293 602 889 0.0 263
pORI00000168 81.544 298 39 8 9 294 297 4 0.0 231
pORI00000160 80.808 297 42 12 3 295 286 1 0.0 219
pORI00000158 80.233 258 46 5 39 295 257 4 0.0 189
pORI00000220 83.333 60 6 4 93 151 223 279 3.58e-08 53