RefSeq NC_009751
DoriC accession number pORI00000246
OriC length 681 nt
OriC AT content 0.7004
The location of oriC region 3555..4235 nt
Browse in NCBI
OriC map
OriC sequences
GTTTAAAAGCCTTTTAAAGTTTCAAAGGTTTTTTTGACGCTTTACAGAGCTTTTAAGGAGTTTTAAAACGAATCAGGTAAACTTATTAGGACTAACACTTAAAAGGGCTTAGAAAGCAAAACATGAGCTTTTAGAGCATCTCTTACTTTTATCTTTAAATAATCACTTTGCTAACCACTGATAGAGAACATCAAGTTATATTCAAAGCTATAAACAGTTTATTATGCCTTAGAAAGCCATATAGTCGTTTCTTATGGCTTTTAAACTGATTCAGGTAAAGTTATGAGGGTAAGTGCTGAAAATCGCTTAGAACGTAAAATATGAGCTTTTATGGTTTTAATCTTTTGGTTTTGACCTTTTCTTTTGACCTTGATTTTTAGATTTTTTAAACGTAGTGAAAAAAGGCGAAGCCTATATTAATTTATCTTATATATTTTAATCTTTTATTCTTTTGCGAGCAAAAAATGTCAGTGTTGGTAAGAATATACGGAATTATATACCGAAAAAAAACTGTGTATATGCCGAAAAAAAACTGTGTATATGCCGAAAAAAAACTGTGTATATGCCGAAAAAAAACTAGAGTGTTTCGGCATAATATGGTATAATAATAGCATAGAGAAATTTCCCGCTAAGAAAACTTTCTCTATGCTTATTCTTAAACACTCACAAAGGAGTATTTCT
GTTTAAAAGCCTTTTAAAGTTTCAAAGGTTTTTTTGACGCTTTACAGAGCTTTTAAGGAGTTTTAAAACGAATCAGGTAAACTTATTAGGACTAACACTTAAAAGGGCTTAGAAAGCAAAACATGAGCTTTTAGAGCATCTCTTACTTTTATCTTTAAATAATCACTTTGCTAACCACTGATAGAGAACATCAAGTTATATTCAAAGCTATAAACAGTTTATTATGCCTTAGAAAGCCATATAGTCGTTTCTTATGGCTTTTAAACTGATTCAGGTAAAGTTATGAGGGTAAGTGCTGAAAATCGCTTAGAACGTAAAATATGAGCTTTTATGGTTTTAATCTTTTGGTTTTGACCTTTTCTTTTGACCTTGATTTTTAGATTTTTTAAACGTAGTGAAAAAAGGCGAAGCCTATATTAATTTATCTTATATATTTTAATCTTTTATTCTTTTGCGAGCAAAAAATGTCAGTGTTGGTAAGAATATACGGAATTATATACCGAAAAAAAACTGTGTATATGCCGAAAAAAAACTGTGTATATGCCGAAAAAAAACTGTGTATATGCCGAAAAAAAACTAGAGTGTTTCGGCATAATATGGTATAATAATAGCATAGAGAAATTTCCCGCTAAGAAAACTTTCTCTATGCTTATTCTTAAACACTCACAAAGGAGTATTTCT
AT-rich region
The information of repeat sequences

Motif KTATATGCCGAAAAAAAACTG

StartP-valueSite
5377.48e-13AAAAAACTGTGTATATGCCGAAAAAAAACTGTGTATATGCC
5157.48e-13AAAAAACTGTGTATATGCCGAAAAAAAACTGTGTATATGCC
5591.38e-11AAAAAACTGTGTATATGCCGAAAAAAAACTAGAGTGTTTCG
4934.08e-11ATATACGGAATTATATACCGAAAAAAAACTGTGTATATGCC
4472.42e-09TAATCTTTTATTCTTTTGCGAGCAAAAAATGTCAGTGTTGG

Motif GYTTAWWAKGGCTTWKAAAGYRAWWYAKG

StartP-valueSite
971.98e-13TAGGACTAACACTTAAAAGGGCTTAGAAAGCAAAACATGAGCTTTTAGA
2473.86e-12CCATATAGTCGTTTCTTATGGCTTTTAAACTGATTCAGGTAAAGTTATG
2177.03e-12GCTATAAACAGTTTATTATGCCTTAGAAAGCCATATAGTCGTTTCTTAT
2958.29e-12GAGGGTAAGTGCTGAAAATCGCTTAGAACGTAAAATATGAGCTTTTATG
492.03e-11GCTTTACAGAGCTTTTAAGGAGTTTTAAAACGAATCAGGTAAACTTATT

Motif TTTTGACS

StartP-valueSite
3621.61e-05TGACCTTTTCTTTTGACCTTGATTTTTA
3491.61e-05AATCTTTTGGTTTTGACCTTTTCTTTTG
323.54e-05TCAAAGGTTTTTTTGACGCTTTACAGAG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000246 100.0 681 0 0 1 681 1 681 0.0 1258
pORI00000397 85.333 225 25 8 343 563 340 120 0.0 226
pORI00000508 82.32 181 26 6 398 574 1718 1896 8.12e-38 152
pORI00000078 77.323 269 52 8 362 625 1169 1433 2.92e-37 150
pORI00000849 89.167 120 10 3 346 465 405 521 3.78e-36 147
pORI00000532 89.167 120 10 3 346 465 607 723 3.78e-36 147
pORI00000408 89.167 120 10 3 346 465 405 521 3.78e-36 147
pORI00000378 87.611 113 13 1 363 475 1156 1267 3.81e-31 130