RefSeq NC_000868.1
DoriC accession number aORI10010003
OriC length 799 nt
OriC AT content 0.6558
The location of oriC region 122701..123499 nt
Browse in NCBI
OriC map
OriC sequences
GACCTAAATTTCCAGTGGAAACATAACACTTTTCGCTAACATATTTTCATTGTGCATGACATAATGTGACATTTAACACGACTATTTAAGCCAAACCGTAGAGAGTCTCCATTGGAAGCATTGGAACCAGAGGAAAGCAACGTAATAATCTATGGCCCACTTTTTATCCTTTGCCTTGACAAGAACATGTTAATGAAGATAATTTCATCTGAAATTTATTCTCGAGAATTTCCACAGGAAACCTCCACAGGACATGAACAAGGATGTGCGTTGAATCTTTACATTTTCCAGTGGCCATAACCAATTTCCGATGGAAGGAAAATGAACATATATGTTCATTCAGATAAGAGCATTTTTACACAAATAAGTGCATTAGGTTAACTTAATTTGTTTAATATTTTGCCAAAGTTAAACAGAAGTGAAGTCCCCCAGGGTTTCATTTCCACTGGAACCGGGTTGCGACACCGAGAATATTCTATTCTTTTTTCTGACAAGACACTCTCCCATATTAGTTGGAACTCCTATTTAAATATTTATCTATGAACAGTTTTATAAGTAAATTGAGAAGCAGAGAAGCAAATGTTCACATATTTATGCACAAAATAGTACATCAACTGAAAAAATGTTCATTTGCAAAAGTAAAAATTTTTGGCTTTTAATTTTACGTTTGTAAACCAACGAAGAATTGCATGCCTTTCTCAACCCAGTTCCACTGGAAATGAAACTCTGGGGGGTTCTTTAGATGGCTATCTGAATGCTAGCATATAAATCGAAAATATACAAGAAAATGTCAAAAAAA
GACCTAAATTTCCAGTGGAAACATAACACTTTTCGCTAACATATTTTCATTGTGCATGACATAATGTGACATTTAACACGACTATTTAAGCCAAACCGTAGAGAGTCTCCATTGGAAGCATTGGAACCAGAGGAAAGCAACGTAATAATCTATGGCCCACTTTTTATCCTTTGCCTTGACAAGAACATGTTAATGAAGATAATTTCATCTGAAATTTATTCTCGAGAATTTCCACAGGAAACCTCCACAGGACATGAACAAGGATGTGCGTTGAATCTTTACATTTTCCAGTGGCCATAACCAATTTCCGATGGAAGGAAAATGAACATATATGTTCATTCAGATAAGAGCATTTTTACACAAATAAGTGCATTAGGTTAACTTAATTTGTTTAATATTTTGCCAAAGTTAAACAGAAGTGAAGTCCCCCAGGGTTTCATTTCCACTGGAACCGGGTTGCGACACCGAGAATATTCTATTCTTTTTTCTGACAAGACACTCTCCCATATTAGTTGGAACTCCTATTTAAATATTTATCTATGAACAGTTTTATAAGTAAATTGAGAAGCAGAGAAGCAAATGTTCACATATTTATGCACAAAATAGTACATCAACTGAAAAAATGTTCATTTGCAAAAGTAAAAATTTTTGGCTTTTAATTTTACGTTTGTAAACCAACGAAGAATTGCATGCCTTTCTCAACCCAGTTCCACTGGAAATGAAACTCTGGGGGGTTCTTTAGATGGCTATCTGAATGCTAGCATATAAATCGAAAATATACAAGAAAATGTCAAAAAAA
GACCTAAATTTCCAGTGGAAACATAACACTTTTCGCTAACATATTTTCATTGTGCATGACATAATGTGACATTTAACACGACTATTTAAGCCAAACCGTAGAGAGTCTCCATTGGAAGCATTGGAACCAGAGGAAAGCAACGTAATAATCTATGGCCCACTTTTTATCCTTTGCCTTGACAAGAACATGTTAATGAAGATAATTTCATCTGAAATTTATTCTCGAGAATTTCCACAGGAAACCTCCACAGGACATGAACAAGGATGTGCGTTGAATCTTTACATTTTCCAGTGGCCATAACCAATTTCCGATGGAAGGAAAATGAACATATATGTTCATTCAGATAAGAGCATTTTTACACAAATAAGTGCATTAGGTTAACTTAATTTGTTTAATATTTTGCCAAAGTTAAACAGAAGTGAAGTCCCCCAGGGTTTCATTTCCACTGGAACCGGGTTGCGACACCGAGAATATTCTATTCTTTTTTCTGACAAGACACTCTCCCATATTAGTTGGAACTCCTATTTAAATATTTATCTATGAACAGTTTTATAAGTAAATTGAGAAGCAGAGAAGCAAATGTTCACATATTTATGCACAAAATAGTACATCAACTGAAAAAATGTTCATTTGCAAAAGTAAAAATTTTTGGCTTTTAATTTTACGTTTGTAAACCAACGAAGAATTGCATGCCTTTCTCAACCCAGTTCCACTGGAAATGAAACTCTGGGGGGTTCTTTAGATGGCTATCTGAATGCTAGCATATAAATCGAAAATATACAAGAAAATGTCAAAAAAA
ORB     AT-rich region
The information of repeat sequences

Motif ATTTCCACTGGAA

StartP-valueSite
4392.06e-08CCAGGGTTTCATTTCCACTGGAACCGGGTTGCG
7064.15e-08TTCTCAACCCAGTTCCACTGGAAATGAAACTCT
86.06e-08GACCTAAATTTCCAGTGGAAACATAACACT
2288.93e-08ATTCTCGAGAATTTCCACAGGAAACCTCCACAG
3041.92e-07GCCATAACCAATTTCCGATGGAAGGAAAATGAA

Motif GACAAGAAAATGTY

StartP-valueSite
1789.32e-08CCTTTGCCTTGACAAGAACATGTTAATGAAGATA
7792.12e-07ATCGAAAATATACAAGAAAATGTCAAAAAAA
5712.61e-07TTGAGAAGCAGAGAAGCAAATGTTCACATATTTA
4902.76e-07TCTTTTTTCTGACAAGACACTCTCCCATATTAGT

Motif CCABWGG

StartP-valueSite
1271.79e-05AGCATTGGAACCAGAGGAAAGCAACGT
2453.71e-05CAGGAAACCTCCACAGGACATGAACAA
2885.28e-05TTTACATTTTCCAGTGGCCATAACCAA
4278.87e-05AAGTGAAGTCCCCCAGGGTTTCATTTC
1091.67e-04TAGAGAGTCTCCATTGGAAGCATTGGA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010003 100.0 799 0 0 1 799 1 799 0.0 1476
aORI10010007 82.47 251 35 8 301 546 295 541 0.0 211
aORI10010121 80.226 177 25 9 386 555 438 265 6.06e-30 124
aORI10010326 100.0 31 0 0 706 736 318 348 6.24e-10 58
aORI10010307 100.0 31 0 0 706 736 318 348 6.24e-10 58
aORI10010101 100.0 28 0 0 706 733 455 428 2.9e-08 53