RefSeq NC_014160.1
DoriC accession number aORI10010365
OriC length 230 nt
OriC AT content 0.4435
The location of oriC region 1314771..1315000 nt
Browse in NCBI
OriC map
OriC sequences
AATAAGCACCTTAAACAGGTCGAGCTAATCATGCTCTCCTTGGTTTTACAAGTTTAGACGGATTTTTAAAAATATCGCTTTAACTCCCTATAAATATGTCTCTTTAATGGGAAAGAAGTGGACCGGCCGGGAGTTGAACCCGGGACCTCTCGGATGCCAACCGAGCGCTCTTCCAGGCTGAGCTACCGGCCCGTCAAAACTTAGATAAGTTTTTACCAGGTTTATAAGGT
AATAAGCACCTTAAACAGGTCGAGCTAATCATGCTCTCCTTGGTTTTACAAGTTTAGACGGATTTTTAAAAATATCGCTTTAACTCCCTATAAATATGTCTCTTTAATGGGAAAGAAGTGGACCGGCCGGGAGTTGAACCCGGGACCTCTCGGATGCCAACCGAGCGCTCTTCCAGGCTGAGCTACCGGCCCGTCAAAACTTAGATAAGTTTTTACCAGGTTTATAAGGT
AATAAGCACCTTAAACAGGTCGAGCTAATCATGCTCTCCTTGGTTTTACAAGTTTAGACGGATTTTTAAAAATATCGCTTTAACTCCCTATAAATATGTCTCTTTAATGGGAAAGAAGTGGACCGGCCGGGAGTTGAACCCGGGACCTCTCGGATGCCAACCGAGCGCTCTTCCAGGCTGAGCTACCGGCCCGTCAAAACTTAGATAAGTTTTTACCAGGTTTATAAGGT
ORB     AT-rich region
The information of repeat sequences

Motif CCGGCCSG

StartP-valueSite
1235.89e-06AAGAAGTGGACCGGCCGGGAGTTGAACC
1861.20e-05GGCTGAGCTACCGGCCCGTCAAAACTTA

Motif TTTWMCAGGTTKAG

StartP-valueSite
2122.59e-07TAGATAAGTTTTTACCAGGTTTATAAGGT
442.92e-07CTCTCCTTGGTTTTACAAGTTTAGACGGATTTTT
1693.08e-07AACCGAGCGCTCTTCCAGGCTGAGCTACCGGCCC
114.19e-07AATAAGCACCTTAAACAGGTCGAGCTAATCATGC

Motif CCGRGMSC

StartP-valueSite
1613.43e-05CGGATGCCAACCGAGCGCTCTTCCAGGC
1403.43e-05GGAGTTGAACCCGGGACCTCTCGGATGC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010365 100.0 230 0 0 1 230 1 230 0.0 425
aORI10010364 96.591 88 3 0 105 192 112 199 3.52e-37 147
aORI10010367 98.684 76 1 0 117 192 33 108 7.62e-34 135
aORI10010384 98.667 75 1 0 118 192 299 373 2.74e-33 134
aORI10010368 97.468 79 1 1 115 193 200 123 2.74e-33 134
aORI10010366 97.333 75 1 1 118 192 227 300 4.59e-31 126
aORI10010264 96.053 76 3 0 117 192 402 327 1.65e-30 124
aORI10010050 94.667 75 4 0 118 192 26 100 2.76e-28 117
aORI10010051 94.828 58 3 0 138 195 1 58 1.67e-20 92
aORI10010099 81.25 96 2 8 112 192 262 168 3.65e-12 64