RefSeq NC_014374.1
DoriC accession number aORI10010366
OriC length 540 nt
OriC AT content 0.4963
The location of oriC region 759135..759674 nt
Browse in NCBI
OriC map
OriC sequences
CGGCTCCAGAGGAAGCCTTGCAGCTAGGCGGTGAGCAGAGGTAGGGCACAGTAACACTGGGGCTGGTGACCTAAGGGGCCCAGGGCCCTCCGCGCGGCTGGCAGGCCCATGGGCTTAACTGATGTCTTGGCCGCAGGACGAAGCAGCAGGCCCTGCGGGCCTGCCAGGGCTTCTGCGGCAGGCCTCTATGAGGCCTTAGCGATCGAAGGCATAATTAGGGGCCCTGGTGGACCGGCCGGGACTTGAACCCGGGACCTCTCGGATGCCAACCGAGCGCTCTTCCAGCTGAGCTACCGGCCCACAGGGCCATTAACAATACTTTAGGGAAGCATTAAAAAGCTTACAGCTGGAGCCGCAGGAAAATTTAGAAAAATGGAACATTAATTAGAATAATTGAATTTTGAAACTCTTTTTAATAACTTAATTATATAGGCCAAAAATATAACTCTTAAAAATGCATTTAATTAAACAATAAACTTTTATAAGTTTGTTTTACATCTTTTCACCTTTTGTGAGGTGAATACCGTGGCGAATCCAACT
CGGCTCCAGAGGAAGCCTTGCAGCTAGGCGGTGAGCAGAGGTAGGGCACAGTAACACTGGGGCTGGTGACCTAAGGGGCCCAGGGCCCTCCGCGCGGCTGGCAGGCCCATGGGCTTAACTGATGTCTTGGCCGCAGGACGAAGCAGCAGGCCCTGCGGGCCTGCCAGGGCTTCTGCGGCAGGCCTCTATGAGGCCTTAGCGATCGAAGGCATAATTAGGGGCCCTGGTGGACCGGCCGGGACTTGAACCCGGGACCTCTCGGATGCCAACCGAGCGCTCTTCCAGCTGAGCTACCGGCCCACAGGGCCATTAACAATACTTTAGGGAAGCATTAAAAAGCTTACAGCTGGAGCCGCAGGAAAATTTAGAAAAATGGAACATTAATTAGAATAATTGAATTTTGAAACTCTTTTTAATAACTTAATTATATAGGCCAAAAATATAACTCTTAAAAATGCATTTAATTAAACAATAAACTTTTATAAGTTTGTTTTACATCTTTTCACCTTTTGTGAGGTGAATACCGTGGCGAATCCAACT
CGGCTCCAGAGGAAGCCTTGCAGCTAGGCGGTGAGCAGAGGTAGGGCACAGTAACACTGGGGCTGGTGACCTAAGGGGCCCAGGGCCCTCCGCGCGGCTGGCAGGCCCATGGGCTTAACTGATGTCTTGGCCGCAGGACGAAGCAGCAGGCCCTGCGGGCCTGCCAGGGCTTCTGCGGCAGGCCTCTATGAGGCCTTAGCGATCGAAGGCATAATTAGGGGCCCTGGTGGACCGGCCGGGACTTGAACCCGGGACCTCTCGGATGCCAACCGAGCGCTCTTCCAGCTGAGCTACCGGCCCACAGGGCCATTAACAATACTTTAGGGAAGCATTAAAAAGCTTACAGCTGGAGCCGCAGGAAAATTTAGAAAAATGGAACATTAATTAGAATAATTGAATTTTGAAACTCTTTTTAATAACTTAATTATATAGGCCAAAAATATAACTCTTAAAAATGCATTTAATTAAACAATAAACTTTTATAAGTTTGTTTTACATCTTTTCACCTTTTGTGAGGTGAATACCGTGGCGAATCCAACT
ORB     AT-rich region
The information of repeat sequences

Motif AHTWNTATARGBNARHWTTAHAACTCTT

StartP-valueSite
4235.85e-12TTAATAACTTAATTATATAGGCCAAAAATATAACTCTTAAAAATGCAT
3849.49e-12TGGAACATTAATTAGAATAATTGAATTTTGAAACTCTTTTTAATAACT
4761.04e-11TAAACAATAAACTTTTATAAGTTTGTTTTACATCTTTTCACCTTTTGT
3153.55e-11GGCCATTAACAATACTTTAGGGAAGCATTAAAAAGCTTACAGCTGGAG

Motif GCVGCAGG

StartP-valueSite
3521.65e-05TACAGCTGGAGCCGCAGGAAAATTTAGA
1301.65e-05TGATGTCTTGGCCGCAGGACGAAGCAGC
1753.50e-05CAGGGCTTCTGCGGCAGGCCTCTATGAG
1435.43e-05GCAGGACGAAGCAGCAGGCCCTGCGGGC
948.41e-05GGCCCTCCGCGCGGCTGGCAGGCCCATG

Motif CTTSCAGCT

StartP-valueSite
2792.63e-06ACCGAGCGCTCTTCCAGCTGAGCTACCGG
175.60e-06CAGAGGAAGCCTTGCAGCTAGGCGGTGAG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010366 100.0 540 0 0 1 540 1 540 0.0 998
aORI10010364 98.701 77 0 1 227 302 125 201 1.87e-33 135
aORI10010367 98.684 76 0 1 227 301 34 109 6.73e-33 134
aORI10010384 97.436 78 1 1 225 301 297 374 2.42e-32 132
aORI10010365 97.333 75 1 1 227 300 118 192 1.13e-30 126
aORI10010368 97.297 74 1 1 228 300 197 124 4.05e-30 124
aORI10010050 94.937 79 3 1 225 302 24 102 1.46e-29 122
aORI10010264 94.872 78 3 1 227 303 401 324 5.24e-29 121