RefSeq NC_009776.1
DoriC accession number aORI10010050
OriC length 139 nt
OriC AT content 0.3525
The location of oriC region 352504..352642 nt
Browse in NCBI
OriC map
OriC sequences
AGGGTCCTCATTTTTTGTAAGGGTGGTGGACCGGCCGGGACTTGAACCCGGGACCTCCCGGTTGCCAACCGGGCGCTCTTCCAGGCTGAGCTACCGGCCCACCTCGCGCCCGGCTCCGAGGGAGGGATCCTAAAACAGT
AGGGTCCTCATTTTTTGTAAGGGTGGTGGACCGGCCGGGACTTGAACCCGGGACCTCCCGGTTGCCAACCGGGCGCTCTTCCAGGCTGAGCTACCGGCCCACCTCGCGCCCGGCTCCGAGGGAGGGATCCTAAAACAGT
AGGGTCCTCATTTTTTGTAAGGGTGGTGGACCGGCCGGGACTTGAACCCGGGACCTCCCGGTTGCCAACCGGGCGCTCTTCCAGGCTGAGCTACCGGCCCACCTCGCGCCCGGCTCCGAGGGAGGGATCCTAAAACAGT
ORB     AT-rich region
The information of repeat sequences

Motif TWRAAC

StartP-valueSite
1314.85e-05GGAGGGATCCTAAAACAGT
423.00e-04CGGCCGGGACTTGAACCCGGGACCTC

Motif TTKSYAA

StartP-valueSite
142.32e-05GTCCTCATTTTTTGTAAGGGTGGTGGA
621.70e-04GACCTCCCGGTTGCCAACCGGGCGCTC

Motif GASCKVCCGG

StartP-valueSite
529.25e-06TTGAACCCGGGACCTCCCGGTTGCCAACCG
881.12e-05CTTCCAGGCTGAGCTACCGGCCCACCTCGC
293.43e-05AAGGGTGGTGGACCGGCCGGGACTTGAACC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010050 100.0 139 0 0 1 139 1 139 0.0 257
aORI10010384 94.186 86 4 1 21 105 294 379 2.04e-32 130
aORI10010364 96.154 78 3 0 26 103 125 202 7.35e-32 128
aORI10010367 96.053 76 3 0 26 101 34 109 9.51e-31 124
aORI10010366 94.937 79 3 1 24 102 225 302 3.42e-30 122
aORI10010365 94.667 75 4 0 26 100 118 192 1.59e-28 117
aORI10010368 94.595 74 4 0 27 100 197 124 5.72e-28 115
aORI10010051 90.909 55 5 0 46 100 1 55 9.71e-16 75
aORI10010099 93.023 43 3 0 60 102 208 166 2.1e-12 64