RefSeq NC_009776.1
DoriC accession number aORI10010051
OriC length 120 nt
OriC AT content 0.375
The location of oriC region 1168293..1168412 nt
Browse in NCBI
OriC map
OriC sequences
ACCCGGGACCTCTCGGGTGCAAGCCGAGCGCTCTTCCAGGCTGAGCTACCGGCCCGTCGGCTGGGCTCCCTTCTACCTTATAAGTTTAATACCACGACGTTCCTCCCCTCCGGGAGGAGA
ACCCGGGACCTCTCGGGTGCAAGCCGAGCGCTCTTCCAGGCTGAGCTACCGGCCCGTCGGCTGGGCTCCCTTCTACCTTATAAGTTTAATACCACGACGTTCCTCCCCTCCGGGAGGAGA
ACCCGGGACCTCTCGGGTGCAAGCCGAGCGCTCTTCCAGGCTGAGCTACCGGCCCGTCGGCTGGGCTCCCTTCTACCTTATAAGTTTAATACCACGACGTTCCTCCCCTCCGGGAGGAGA
ORB     AT-rich region
The information of repeat sequences

Motif TTAWWA

StartP-valueSite
861.25e-04CCTTATAAGTTTAATACCACGACGTT
781.25e-04CCCTTCTACCTTATAAGTTTAATACC

Motif TSCRRGCBGAG

StartP-valueSite
354.16e-07CGAGCGCTCTTCCAGGCTGAGCTACCGGCCC
185.37e-06ACCTCTCGGGTGCAAGCCGAGCGCTCTTCCA
1096.20e-06GTTCCTCCCCTCCGGGAGGAGA

Motif GACSTY

StartP-valueSite
961.87e-04TTAATACCACGACGTTCCTCCCCTCC
71.18e-03ACCCGGGACCTCTCGGGTGCAA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010051 100.0 120 0 0 1 120 1 120 0.0 222
aORI10010365 94.828 58 3 0 1 58 138 195 8.14e-21 92
aORI10010368 94.643 56 3 0 1 56 178 123 1.05e-19 88
aORI10010367 93.22 59 4 0 1 59 54 112 1.05e-19 88
aORI10010384 94.545 55 3 0 1 55 319 373 3.79e-19 86
aORI10010364 94.545 55 3 0 1 55 145 199 3.79e-19 86
aORI10010050 90.909 55 5 0 1 55 46 100 8.2e-16 75
aORI10010099 100.0 38 0 0 18 55 205 168 1.06e-14 71