ORI97278294 | DoriC 14.0: an updated database of prokaryotic replication origins with significantly expanded plasmid oriV annotations

Basic Information

Assembly acc	`GCF_045809005.2`
Acc	`NZ_CM141436.1`
OriID	ORI97278294
Organism	Mycobacterium cajalii
Topology	Circular
Lineage	Bacteria ; Bacillati ; Actinomycetota ; Actinomycetes ; Mycobacteriales ; Mycobacteriaceae ; Mycobacterium ; Mycobacterium cajalii
Assembly Level	Complete
Literature linkage	Not linked
Chromosome size	6205626 nt
Chromosome GC content	68.90%
Indicator genes	dnaA 1... 1521nt dnaN 2035... 3234nt hemB 860132... 861115nt hemE 2130864... 2131913nt rpmH 6204900... 6205043nt
OriC location	1521 ... 2034 nt
OriC Length	513 nt
OriC AT Content	0.3996

Comparative Sequence Support

Recurrence category Singleton

Sequence cluster BC-OH004348

Cluster members 1

Distinct accessions 1

Species / genera 1 / 1

Literature-linked members 0

Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.

Top 10 most similar Ori IDs

Rank	Ori ID	Accession	Organism	Identity	Reciprocal coverage	Literature linkage
1	`ORI97207406`	`NZ_AP022584.1`	Mycobacterium marseillense	73.10%	95.90%	Not linked
2	`ORI97227811`	`NZ_CP023147.1`	Mycobacterium marseillense	73.10%	95.90%	Not linked
3	`ORI97209622`	`NZ_CP080999.1`	Mycobacterium malmoense	71.80%	96.50%	Not linked
4	`ORI97255910`	`NZ_CP060015.1`	Mycobacterium malmoense	71.80%	96.50%	Not linked
5	`ORI97261467`	`NZ_CP113529.1`	Mycobacterium sp. Aquia_216	72.20%	95.80%	Not linked
6	`ORI97207486`	`NZ_AP024245.1`	Mycobacterium intracellulare	72.90%	94.40%	Not linked
7	`ORI97207508`	`NZ_AP024260.1`	Mycobacterium intracellulare	72.90%	94.40%	Not linked
8	`ORI97207512`	`NZ_AP024264.1`	Mycobacterium intracellulare	72.90%	94.40%	Not linked
9	`ORI97227745`	`NZ_CP015267.1`	Mycobacterium intracellulare subsp. chimaera	72.90%	94.40%	Not linked
10	`ORI97227757`	`NZ_CP015964.1`	Mycobacterium intracellulare subsp. yongonense	72.90%	94.40%	Not linked

The interactive Z-curves rotated at the maximum of the GC disparity.

RIP Sequence-Similarity Network

Replication Initiation Protein Information

Gene Start	Gene End	Translation
1	1521	MTDDPGSTFTTVWSAVVSEL...

OriC Visualization

OriC map

OriC sequences

dnaACCGCGCCTCTTTTTTCGAAAAAACTTCTCACTCCCCTGTCACAACAGTCACAGCGGTGCATTGTGCGCAGGCATGTGCACAACCCTGCCGAACAACCGATCGCTGATCACACTCCAGTGCACACCCGGCGTTCATCCCCAGCCACTCAACGACCGACGCACAACCGCCGAGCGTGTCATCCACAACCCGATGAGTCCCCTAGCTGCGCCGACCCCTGCTGTCCCCAGCATGCACACGCCTTATTACTGGTACTGAGATATCTTCGATCTTCCTTCTTTGAAAACCGGCCCTGGGGACGTTCGGATCACACGGGTCCGCACCGTCGACGAACCGGCGCCTTGTCGGGCCCTGCGATTAGCTTTCAAGATGGCCCCCGACGATCTACGGTTGTTCTTCGGCTGCCGTTGCGGTCGTCATGGCTCGCTTTGTGCCATCGACGTTCGTCGCGGGGACCCACGCTAGTGGGAGGGCTAGCCCGGGGATTTGGACACGTGGCAGGTGAAGGGACGCTTTdnaN

dnaaCCGCGCCTCTTTTTTCGAAAAAACTTCTCACTCCCCTGTCACAACAGTCACAGCGGTGCATTGTGCGCAGGCATGTGCACAACCCTGCCGAACAACCGATCGCTGATCACACTCCAGTGCACACCCGGCGTTCATCCCCAGCCACTCAACGACCGACGCACAACCGCCGAGCGTGTCATCCACAACCCGATGAGTCCCCTAGCTGCGCCGACCCCTGCTGTCCCCAGCATGCACACGCCTTATTACTGGTACTGAGATATCTTCGATCTTCCTTCTTTGAAAACCGGCCCTGGGGACGTTCGGATCACACGGGTCCGCACCGTCGACGAACCGGCGCCTTGTCGGGCCCTGCGATTAGCTTTCAAGATGGCCCCCGACGATCTACGGTTGTTCTTCGGCTGCCGTTGCGGTCGTCATGGCTCGCTTTGTGCCATCGACGTTCGTCGCGGGGACCCACGCTAGTGGGAGGGCTAGCCCGGGGATTTGGACACGTGGCAGGTGAAGGGACGCTTTdnan

5'-DnaA box-3' 3'-DnaA box-5' Spacer DnaA-trio ATP-DnaA box
AT-rich region GATC CtrA binding motif Fis binding site IHF binding site

BLAST Results

There are no BLAST results available for this genome.

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