Basic Information

Assembly acc GCF_016756155.1
Acc NZ_AP024260.1
OriID ORI97207508
Organism Mycobacterium intracellulare
Topology Circular
Lineage Bacteria ; Bacillati ; Actinomycetota ; Actinomycetes ; Mycobacteriales ; Mycobacteriaceae ; Mycobacterium ; Mycobacterium intracellulare
Assembly Level Complete
Literature linkage Not linked
Chromosome size 5737772 nt
Chromosome GC content 67.76%
Indicator genes
  • dnaA      101... 1636nt
  • dnaN      2173... 3372nt
  • hemE      3925197... 3926270nt
  • hemB      5011722... 5012711nt
  • rpmH      5737129... 5737272nt
OriC location
  • 1637 ... 2172 nt
OriC Length
  • 536 nt
OriC AT Content
  • 0.3825

Comparative Sequence Support

Recurrence category Cross-taxon
Sequence cluster BC-OH000082
Cluster members 132
Distinct accessions 132
Species / genera 7 / 1
Literature-linked members 0

Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.

Top 10 most similar Ori IDs

Rank Ori ID Accession Organism Identity Reciprocal coverage Literature linkage
1 ORI97207486 NZ_AP024245.1 Mycobacterium intracellulare 100.00% 100.00% Not linked
2 ORI97207512 NZ_AP024264.1 Mycobacterium intracellulare 100.00% 100.00% Not linked
3 ORI97227745 NZ_CP015267.1 Mycobacterium intracellulare subsp. chimaera 100.00% 100.00% Not linked
4 ORI97227807 NZ_CP022223.1 Mycobacterium intracellulare subsp. chimaera 100.00% 100.00% Not linked
5 ORI97227813 NZ_CP023151.1 Mycobacterium intracellulare subsp. chimaera 100.00% 100.00% Not linked
6 ORI97207846 NZ_CP012885.2 Mycobacterium intracellulare subsp. chimaera 99.00% 100.00% Not linked
7 ORI97208872 NZ_CP045963.1 Mycobacterium intracellulare subsp. chimaera 99.00% 100.00% Not linked
8 ORI97227650 NZ_LT703505.1 Mycobacterium intracellulare subsp. chimaera 99.00% 100.00% Not linked
9 ORI97227746 NZ_CP015272.1 Mycobacterium intracellulare subsp. chimaera 99.00% 100.00% Not linked
10 ORI97227747 NZ_CP015278.1 Mycobacterium intracellulare subsp. chimaera 99.00% 100.00% Not linked

The interactive Z-curves rotated at the maximum of the GC disparity.

RIP Sequence-Similarity Network

Bacteria Chromosomes 1,537 RIP sequence subfamilies from 66,403 proteins (Complete/Chromosome only) Accession: NZ_AP024260.1
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Replication Initiation Protein Information

Gene Start Gene End Translation
101 1636 MTDDPGSGFTTVWNAVVSEL...

OriC Visualization

OriC map
OriC sequences
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCAGTGCAGTACCGGGCGTTCCGTGCACACCCGTCGTTCGTCCCCACGGGACCAACACCTGACTCACAGGCGCCGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGACGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCAGTGCAGTACCGGGCGTTCCGTGCACACCCGTCGTTCGTCCCCACGGGACCAACACCTGACTCACAGGCGCCGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGACGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCAGTGCAGTACCGGGCGTTCCGTGCACACCCGTCGTTCGTCCCCACGGGACCAACACCTGACTCACAGGCGCCGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGACGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCAGTGCAGTACCGGGCGTTCCGTGCACACCCGTCGTTCGTCCCCACGGGACCAACACCTGACTCACAGGCGCCGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGACGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCAGTGCAGTACCGGGCGTTCCGTGCACACCCGTCGTTCGTCCCCACGGGACCAACACCTGACTCACAGGCGCCGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGACGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCAGTGCAGTACCGGGCGTTCCGTGCACACCCGTCGTTCGTCCCCACGGGACCAACACCTGACTCACAGGCGCCGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGACGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCAGTGCAGTACCGGGCGTTCCGTGCACACCCGTCGTTCGTCCCCACGGGACCAACACCTGACTCACAGGCGCCGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGACGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaaATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCAGTGCAGTACCGGGCGTTCCGTGCACACCCGTCGTTCGTCCCCACGGGACCAACACCTGACTCACAGGCGCCGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGACGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnan
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCAGTGCAGTACCGGGCGTTCCGTGCACACCCGTCGTTCGTCCCCACGGGACCAACACCTGACTCACAGGCGCCGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGACGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCAGTGCAGTACCGGGCGTTCCGTGCACACCCGTCGTTCGTCCCCACGGGACCAACACCTGACTCACAGGCGCCGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGACGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCCAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCAGTGCAGTACCGGGCGTTCCGTGCACACCCGTCGTTCGTCCCCACGGGACCAACACCTGACTCACAGGCGCCGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGAAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGACGCTCGTGGCGGAGCCCCGTGCTAGCGGGGGGAGGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
5'-DnaA box-3'    3'-DnaA box-5'   Spacer   DnaA-trio   ATP-DnaA box
AT-rich region   GATC   CtrA binding motif   Fis binding site   IHF binding site

BLAST Results

Subject ID Identity (%) Length Mismatches Gaps Query Start Query End Subject Start Subject End E-value Bit Score
ORI60040082 82.96% 528 71 16 19 536 51 569 0.0 459.0
ORI10040011 82.73% 521 71 16 26 536 58 569 0.0 446.0
Found 2 BLAST matches
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