Basic Information

Assembly acc GCF_002148175.1
Acc NZ_CP015964.1
OriID ORI97227757
Organism Mycobacterium intracellulare subsp. yongonense
Topology Circular
Lineage Bacteria ; Bacillati ; Actinomycetota ; Actinomycetes ; Mycobacteriales ; Mycobacteriaceae ; Mycobacterium ; Mycobacterium intracellulare
Assembly Level Complete
Literature linkage Not linked
Chromosome size 5445538 nt
Chromosome GC content 68.02%
Indicator genes
  • dnaA      19... 1554nt
  • dnaN      2090... 3289nt
  • hemE      3626272... 3627345nt
  • hemB      4726540... 4727520nt
  • rpmH      5444813... 5444956nt
OriC location
  • 1555 ... 2089 nt
OriC Length
  • 535 nt
OriC AT Content
  • 0.3794

Comparative Sequence Support

Recurrence category Cross-taxon
Sequence cluster BC-OH000082
Cluster members 132
Distinct accessions 132
Species / genera 7 / 1
Literature-linked members 0

Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.

Top 10 most similar Ori IDs

Rank Ori ID Accession Organism Identity Reciprocal coverage Literature linkage
1 ORI97245258 NC_021715.1 Mycobacterium intracellulare subsp. yongonense 05-1390 100.00% 100.00% Not linked
2 ORI97247531 NZ_CP015965.1 Mycobacterium intracellulare subsp. yongonense 100.00% 99.40% Not linked
3 ORI97207486 NZ_AP024245.1 Mycobacterium intracellulare 98.60% 100.00% Not linked
4 ORI97207508 NZ_AP024260.1 Mycobacterium intracellulare 98.60% 100.00% Not linked
5 ORI97207512 NZ_AP024264.1 Mycobacterium intracellulare 98.60% 100.00% Not linked
6 ORI97227745 NZ_CP015267.1 Mycobacterium intracellulare subsp. chimaera 98.60% 100.00% Not linked
7 ORI97227807 NZ_CP022223.1 Mycobacterium intracellulare subsp. chimaera 98.60% 100.00% Not linked
8 ORI97227813 NZ_CP023151.1 Mycobacterium intracellulare subsp. chimaera 98.60% 100.00% Not linked
9 ORI97207846 NZ_CP012885.2 Mycobacterium intracellulare subsp. chimaera 98.50% 100.00% Not linked
10 ORI97208872 NZ_CP045963.1 Mycobacterium intracellulare subsp. chimaera 98.50% 100.00% Not linked

The interactive Z-curves rotated at the maximum of the GC disparity.

RIP Sequence-Similarity Network

Bacteria Chromosomes 1,537 RIP sequence subfamilies from 66,403 proteins (Complete/Chromosome only) Accession: NZ_CP015964.1
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Replication Initiation Protein Information

Gene Start Gene End Translation
19 1554 MTDDPGSGFTTVWNAVVSEL...

OriC Visualization

OriC map
OriC sequences
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCTAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCGGTGCAGTACCGGGCGTTCCGTGCACACCCGTCGTTCGTCCCCACGGGACCAACACCTGACTCACAGGCGACGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGCAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCTAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCGGTGCAGTACCGGGCGTTCCGTGCACACCCGTCGTTCGTCCCCACGGGACCAACACCTGACTCACAGGCGACGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGCAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCTAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCGGTGCAGTACCGGGCGTTCCGTGCACACCCGTCGTTCGTCCCCACGGGACCAACACCTGACTCACAGGCGACGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGCAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCTAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCGGTGCAGTACCGGGCGTTCCGTGCACACCCGTCGTTCGTCCCCACGGGACCAACACCTGACTCACAGGCGACGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGCAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCTAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCGGTGCAGTACCGGGCGTTCCGTGCACACCCGTCGTTCGTCCCCACGGGACCAACACCTGACTCACAGGCGACGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGCAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCTAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCGGTGCAGTACCGGGCGTTCCGTGCACACCCGTCGTTCGTCCCCACGGGACCAACACCTGACTCACAGGCGACGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGCAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCTAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCGGTGCAGTACCGGGCGTTCCGTGCACACCCGTCGTTCGTCCCCACGGGACCAACACCTGACTCACAGGCGACGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGCAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaaATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCTAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCGGTGCAGTACCGGGCGTTCCGTGCACACCCGTCGTTCGTCCCCACGGGACCAACACCTGACTCACAGGCGACGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGCAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnan
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCTAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCGGTGCAGTACCGGGCGTTCCGTGCACACCCGTCGTTCGTCCCCACGGGACCAACACCTGACTCACAGGCGACGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGCAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCTAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCGGTGCAGTACCGGGCGTTCCGTGCACACCCGTCGTTCGTCCCCACGGGACCAACACCTGACTCACAGGCGACGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGCAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
dnaAATCCCGGGTTTTCGGCGCCCCTGCGCGCAATTTTTTCGAGAAACTTCTCGCGCGTCCGTCACATCCGCAACACCTAGGGCATGTGCGCAGCCCTGTGCACACAGCCTTCAAACTCCGGTGCAGTACCGGGCGTTCCGTGCACACCCGTCGTTCGTCCCCACGGGACCAACACCTGACTCACAGGCGACGCCGCGACGATCCACATCCCGATCGTCGCGCTAGCTGGGCCGGGGCGACGCTGTCCCCAGAATGCACAGGCCTTAATACTGTTACTGAGATCTCTACATCGGTTCTTCTTGGCAATACAGGCCTGGGGACGTTCGGTGCACACCCCTCGCCGAGGCCGTCGTCAGATCGTTTTGTCGGCCTTCGCGATTAGCTTTCAAGATGGCCCCGGAGGATCTACGGTTGTTCTTCGACTGCCGTTACGGTCGTCGTCGGCGCGTTGCGTCGCCGGCGCTCGTGGCGGGGCCCCGTGCTAGCGGGGGGAGGCTAGCCACAATGGATTCGAAAACGCTGAAGGTGAAGGGACGCTdnaN
5'-DnaA box-3'    3'-DnaA box-5'   Spacer   DnaA-trio   ATP-DnaA box
AT-rich region   GATC   CtrA binding motif   Fis binding site   IHF binding site

BLAST Results

Subject ID Identity (%) Length Mismatches Gaps Query Start Query End Subject Start Subject End E-value Bit Score
ORI60040082 82.92% 527 72 15 19 535 51 569 0.0 459.0
ORI10040011 82.69% 520 72 15 26 535 58 569 0.0 446.0
Found 2 BLAST matches
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