Basic Information

Assembly acc GCF_000340435.2
Acc NZ_CP011883.2
OriID ORI97011763
Organism Mycobacterium haemophilum DSM 44634
Topology Circular
Lineage Bacteria ; Bacillati ; Actinomycetota ; Actinomycetes ; Mycobacteriales ; Mycobacteriaceae ; Mycobacterium ; Mycobacterium haemophilum
Assembly Level Complete
Literature linkage Not linked
Chromosome size 4235765 nt
Chromosome GC content 63.95%
Indicator genes
  • dnaA      1... 1527nt
  • dnaN      2058... 3257nt
  • hemB      613793... 614776nt
  • hemB      816854... 817837nt
  • hemE      1656076... 1657137nt
  • rpmH      4235018... 4235161nt
OriC location
  • 1528 ... 2057 nt
OriC Length
  • 530 nt
OriC AT Content
  • 0.4509

Comparative Sequence Support

Recurrence category Singleton
Sequence cluster BC-OH004937
Cluster members 1
Distinct accessions 1
Species / genera 1 / 1
Literature-linked members 0

Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.

Top 10 most similar Ori IDs

Rank Ori ID Accession Organism Identity Reciprocal coverage Literature linkage
1 ORI10010013 NC_002677.1 Mycobacterium leprae TN 78.10% 99.60% Not linked
2 ORI97024466 NZ_AP014567.1 Mycobacterium leprae Kyoto-2 78.10% 99.60% Not linked
3 ORI97030558 NZ_CP029543.1 Mycobacterium leprae 78.10% 99.60% Not linked
4 ORI97209654 NZ_CP083405.1 Mycobacterium lepromatosis 77.70% 98.80% Not linked
5 ORI97283834 NZ_CP155806.1 Mycobacterium lepromatosis 77.70% 98.80% Not linked
6 ORI97261467 NZ_CP113529.1 Mycobacterium sp. Aquia_216 70.00% 94.30% Not linked
7 ORI92310402 NC_010612.1 Mycobacterium marinum M 70.20% 64.00% Not linked
8 ORI97016700 NZ_HG917972.2 Mycobacterium marinum E11 70.20% 64.00% Not linked
9 ORI97208128 NZ_CP025779.1 Mycobacterium marinum 70.20% 64.00% Not linked
10 ORI97034092 NZ_AP022619.1 Mycobacterium paraseoulense 73.30% 59.00% Not linked

The interactive Z-curves rotated at the maximum of the GC disparity.

RIP Sequence-Similarity Network

Bacteria Chromosomes 1,537 RIP sequence subfamilies from 66,403 proteins (Complete/Chromosome only) Accession: NZ_CP011883.2
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Replication Initiation Protein Information

Gene Start Gene End Translation
1 1527 MTDDPGLGFTTVWNAVVSEL...

OriC Visualization

OriC map
OriC sequences
dnaACTCTCGGTGCACAACACGTGCATCCTTCGGAAAAAACTTCTTGCACGCACGTCACACCAGCCACATCCCCAAGGTGTGTGCACTTCTGTGGACAAACTAGGTATACCGACGTGCACCAATCCCCGATTCCGTGCACACCCATAGTTGATCCACAGCGGCGGATCACAGACCCTGCAGTTATCAACACCGACATCCACACTTCAACAGCTCTTCTAGCTGCAATAAGACCTGGTTGTCCCCAAAATTCACACCCCTTAATACTGATACCGAGATCTCTCCGTTATTTCTTGTTTGAAGAACGGCACTGGGGATGTTGCGTTGCACAGGACGCCTTGACGTGACCGCAACCGTGGTTGTCACCGTCGTCGCCTAGCTTTTAAGTTGGCGCTCGAAGATCTACGGTTGTTCTTCGACTGCCGTTGCGGGCGTCGTGGCGCACTGCGTGTCACCGGCGTTCGTTGCGGTGGGCCCCACGCTAGCGGGGGAGGCTAGCCACTGGATTTCAACTGATTCTTAGGTGAAGGGACGCCdnaN
dnaACTCTCGGTGCACAACACGTGCATCCTTCGGAAAAAACTTCTTGCACGCACGTCACACCAGCCACATCCCCAAGGTGTGTGCACTTCTGTGGACAAACTAGGTATACCGACGTGCACCAATCCCCGATTCCGTGCACACCCATAGTTGATCCACAGCGGCGGATCACAGACCCTGCAGTTATCAACACCGACATCCACACTTCAACAGCTCTTCTAGCTGCAATAAGACCTGGTTGTCCCCAAAATTCACACCCCTTAATACTGATACCGAGATCTCTCCGTTATTTCTTGTTTGAAGAACGGCACTGGGGATGTTGCGTTGCACAGGACGCCTTGACGTGACCGCAACCGTGGTTGTCACCGTCGTCGCCTAGCTTTTAAGTTGGCGCTCGAAGATCTACGGTTGTTCTTCGACTGCCGTTGCGGGCGTCGTGGCGCACTGCGTGTCACCGGCGTTCGTTGCGGTGGGCCCCACGCTAGCGGGGGAGGCTAGCCACTGGATTTCAACTGATTCTTAGGTGAAGGGACGCCdnaN
dnaACTCTCGGTGCACAACACGTGCATCCTTCGGAAAAAACTTCTTGCACGCACGTCACACCAGCCACATCCCCAAGGTGTGTGCACTTCTGTGGACAAACTAGGTATACCGACGTGCACCAATCCCCGATTCCGTGCACACCCATAGTTGATCCACAGCGGCGGATCACAGACCCTGCAGTTATCAACACCGACATCCACACTTCAACAGCTCTTCTAGCTGCAATAAGACCTGGTTGTCCCCAAAATTCACACCCCTTAATACTGATACCGAGATCTCTCCGTTATTTCTTGTTTGAAGAACGGCACTGGGGATGTTGCGTTGCACAGGACGCCTTGACGTGACCGCAACCGTGGTTGTCACCGTCGTCGCCTAGCTTTTAAGTTGGCGCTCGAAGATCTACGGTTGTTCTTCGACTGCCGTTGCGGGCGTCGTGGCGCACTGCGTGTCACCGGCGTTCGTTGCGGTGGGCCCCACGCTAGCGGGGGAGGCTAGCCACTGGATTTCAACTGATTCTTAGGTGAAGGGACGCCdnaN
dnaACTCTCGGTGCACAACACGTGCATCCTTCGGAAAAAACTTCTTGCACGCACGTCACACCAGCCACATCCCCAAGGTGTGTGCACTTCTGTGGACAAACTAGGTATACCGACGTGCACCAATCCCCGATTCCGTGCACACCCATAGTTGATCCACAGCGGCGGATCACAGACCCTGCAGTTATCAACACCGACATCCACACTTCAACAGCTCTTCTAGCTGCAATAAGACCTGGTTGTCCCCAAAATTCACACCCCTTAATACTGATACCGAGATCTCTCCGTTATTTCTTGTTTGAAGAACGGCACTGGGGATGTTGCGTTGCACAGGACGCCTTGACGTGACCGCAACCGTGGTTGTCACCGTCGTCGCCTAGCTTTTAAGTTGGCGCTCGAAGATCTACGGTTGTTCTTCGACTGCCGTTGCGGGCGTCGTGGCGCACTGCGTGTCACCGGCGTTCGTTGCGGTGGGCCCCACGCTAGCGGGGGAGGCTAGCCACTGGATTTCAACTGATTCTTAGGTGAAGGGACGCCdnaN
dnaACTCTCGGTGCACAACACGTGCATCCTTCGGAAAAAACTTCTTGCACGCACGTCACACCAGCCACATCCCCAAGGTGTGTGCACTTCTGTGGACAAACTAGGTATACCGACGTGCACCAATCCCCGATTCCGTGCACACCCATAGTTGATCCACAGCGGCGGATCACAGACCCTGCAGTTATCAACACCGACATCCACACTTCAACAGCTCTTCTAGCTGCAATAAGACCTGGTTGTCCCCAAAATTCACACCCCTTAATACTGATACCGAGATCTCTCCGTTATTTCTTGTTTGAAGAACGGCACTGGGGATGTTGCGTTGCACAGGACGCCTTGACGTGACCGCAACCGTGGTTGTCACCGTCGTCGCCTAGCTTTTAAGTTGGCGCTCGAAGATCTACGGTTGTTCTTCGACTGCCGTTGCGGGCGTCGTGGCGCACTGCGTGTCACCGGCGTTCGTTGCGGTGGGCCCCACGCTAGCGGGGGAGGCTAGCCACTGGATTTCAACTGATTCTTAGGTGAAGGGACGCCdnaN
dnaACTCTCGGTGCACAACACGTGCATCCTTCGGAAAAAACTTCTTGCACGCACGTCACACCAGCCACATCCCCAAGGTGTGTGCACTTCTGTGGACAAACTAGGTATACCGACGTGCACCAATCCCCGATTCCGTGCACACCCATAGTTGATCCACAGCGGCGGATCACAGACCCTGCAGTTATCAACACCGACATCCACACTTCAACAGCTCTTCTAGCTGCAATAAGACCTGGTTGTCCCCAAAATTCACACCCCTTAATACTGATACCGAGATCTCTCCGTTATTTCTTGTTTGAAGAACGGCACTGGGGATGTTGCGTTGCACAGGACGCCTTGACGTGACCGCAACCGTGGTTGTCACCGTCGTCGCCTAGCTTTTAAGTTGGCGCTCGAAGATCTACGGTTGTTCTTCGACTGCCGTTGCGGGCGTCGTGGCGCACTGCGTGTCACCGGCGTTCGTTGCGGTGGGCCCCACGCTAGCGGGGGAGGCTAGCCACTGGATTTCAACTGATTCTTAGGTGAAGGGACGCCdnaN
dnaACTCTCGGTGCACAACACGTGCATCCTTCGGAAAAAACTTCTTGCACGCACGTCACACCAGCCACATCCCCAAGGTGTGTGCACTTCTGTGGACAAACTAGGTATACCGACGTGCACCAATCCCCGATTCCGTGCACACCCATAGTTGATCCACAGCGGCGGATCACAGACCCTGCAGTTATCAACACCGACATCCACACTTCAACAGCTCTTCTAGCTGCAATAAGACCTGGTTGTCCCCAAAATTCACACCCCTTAATACTGATACCGAGATCTCTCCGTTATTTCTTGTTTGAAGAACGGCACTGGGGATGTTGCGTTGCACAGGACGCCTTGACGTGACCGCAACCGTGGTTGTCACCGTCGTCGCCTAGCTTTTAAGTTGGCGCTCGAAGATCTACGGTTGTTCTTCGACTGCCGTTGCGGGCGTCGTGGCGCACTGCGTGTCACCGGCGTTCGTTGCGGTGGGCCCCACGCTAGCGGGGGAGGCTAGCCACTGGATTTCAACTGATTCTTAGGTGAAGGGACGCCdnaN
dnaaCTCTCGGTGCACAACACGTGCATCCTTCGGAAAAAACTTCTTGCACGCACGTCACACCAGCCACATCCCCAAGGTGTGTGCACTTCTGTGGACAAACTAGGTATACCGACGTGCACCAATCCCCGATTCCGTGCACACCCATAGTTGATCCACAGCGGCGGATCACAGACCCTGCAGTTATCAACACCGACATCCACACTTCAACAGCTCTTCTAGCTGCAATAAGACCTGGTTGTCCCCAAAATTCACACCCCTTAATACTGATACCGAGATCTCTCCGTTATTTCTTGTTTGAAGAACGGCACTGGGGATGTTGCGTTGCACAGGACGCCTTGACGTGACCGCAACCGTGGTTGTCACCGTCGTCGCCTAGCTTTTAAGTTGGCGCTCGAAGATCTACGGTTGTTCTTCGACTGCCGTTGCGGGCGTCGTGGCGCACTGCGTGTCACCGGCGTTCGTTGCGGTGGGCCCCACGCTAGCGGGGGAGGCTAGCCACTGGATTTCAACTGATTCTTAGGTGAAGGGACGCCdnan
dnaACTCTCGGTGCACAACACGTGCATCCTTCGGAAAAAACTTCTTGCACGCACGTCACACCAGCCACATCCCCAAGGTGTGTGCACTTCTGTGGACAAACTAGGTATACCGACGTGCACCAATCCCCGATTCCGTGCACACCCATAGTTGATCCACAGCGGCGGATCACAGACCCTGCAGTTATCAACACCGACATCCACACTTCAACAGCTCTTCTAGCTGCAATAAGACCTGGTTGTCCCCAAAATTCACACCCCTTAATACTGATACCGAGATCTCTCCGTTATTTCTTGTTTGAAGAACGGCACTGGGGATGTTGCGTTGCACAGGACGCCTTGACGTGACCGCAACCGTGGTTGTCACCGTCGTCGCCTAGCTTTTAAGTTGGCGCTCGAAGATCTACGGTTGTTCTTCGACTGCCGTTGCGGGCGTCGTGGCGCACTGCGTGTCACCGGCGTTCGTTGCGGTGGGCCCCACGCTAGCGGGGGAGGCTAGCCACTGGATTTCAACTGATTCTTAGGTGAAGGGACGCCdnaN
dnaACTCTCGGTGCACAACACGTGCATCCTTCGGAAAAAACTTCTTGCACGCACGTCACACCAGCCACATCCCCAAGGTGTGTGCACTTCTGTGGACAAACTAGGTATACCGACGTGCACCAATCCCCGATTCCGTGCACACCCATAGTTGATCCACAGCGGCGGATCACAGACCCTGCAGTTATCAACACCGACATCCACACTTCAACAGCTCTTCTAGCTGCAATAAGACCTGGTTGTCCCCAAAATTCACACCCCTTAATACTGATACCGAGATCTCTCCGTTATTTCTTGTTTGAAGAACGGCACTGGGGATGTTGCGTTGCACAGGACGCCTTGACGTGACCGCAACCGTGGTTGTCACCGTCGTCGCCTAGCTTTTAAGTTGGCGCTCGAAGATCTACGGTTGTTCTTCGACTGCCGTTGCGGGCGTCGTGGCGCACTGCGTGTCACCGGCGTTCGTTGCGGTGGGCCCCACGCTAGCGGGGGAGGCTAGCCACTGGATTTCAACTGATTCTTAGGTGAAGGGACGCCdnaN
dnaACTCTCGGTGCACAACACGTGCATCCTTCGGAAAAAACTTCTTGCACGCACGTCACACCAGCCACATCCCCAAGGTGTGTGCACTTCTGTGGACAAACTAGGTATACCGACGTGCACCAATCCCCGATTCCGTGCACACCCATAGTTGATCCACAGCGGCGGATCACAGACCCTGCAGTTATCAACACCGACATCCACACTTCAACAGCTCTTCTAGCTGCAATAAGACCTGGTTGTCCCCAAAATTCACACCCCTTAATACTGATACCGAGATCTCTCCGTTATTTCTTGTTTGAAGAACGGCACTGGGGATGTTGCGTTGCACAGGACGCCTTGACGTGACCGCAACCGTGGTTGTCACCGTCGTCGCCTAGCTTTTAAGTTGGCGCTCGAAGATCTACGGTTGTTCTTCGACTGCCGTTGCGGGCGTCGTGGCGCACTGCGTGTCACCGGCGTTCGTTGCGGTGGGCCCCACGCTAGCGGGGGAGGCTAGCCACTGGATTTCAACTGATTCTTAGGTGAAGGGACGCCdnaN
5'-DnaA box-3'    3'-DnaA box-5'   Spacer   DnaA-trio   ATP-DnaA box
AT-rich region   GATC   CtrA binding motif   Fis binding site   IHF binding site

BLAST Results

Subject ID Identity (%) Length Mismatches Gaps Query Start Query End Subject Start Subject End E-value Bit Score
ORI10040011 76.07% 305 54 15 234 529 274 568 0.0 141.0
ORI60040082 75.08% 305 57 15 234 529 274 568 0.0 124.0
Found 2 BLAST matches
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