Basic Information

Assembly acc GCF_003391415.1
Acc NZ_CP025779.1
OriID ORI97208128
Organism Mycobacterium marinum
Topology Circular
Lineage Bacteria ; Bacillati ; Actinomycetota ; Actinomycetes ; Mycobacteriales ; Mycobacteriaceae ; Mycobacterium ; Mycobacterium marinum
Assembly Level Complete
Literature linkage Not linked
Chromosome size 6467358 nt
Chromosome GC content 65.70%
Indicator genes
  • dnaA      25... 1557nt
  • dnaN      2098... 3306nt
  • hemB      947567... 948550nt
  • hemE      2376256... 2377317nt
  • rpmH      6466709... 6466852nt
OriC location
  • 1558 ... 2097 nt
OriC Length
  • 540 nt
OriC AT Content
  • 0.4444

Comparative Sequence Support

Recurrence category Cross-taxon
Sequence cluster BC-OH000337
Cluster members 26
Distinct accessions 26
Species / genera 5 / 1
Literature-linked members 0

Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.

Top 10 most similar Ori IDs

Rank Ori ID Accession Organism Identity Reciprocal coverage Literature linkage
1 ORI97016700 NZ_HG917972.2 Mycobacterium marinum E11 100.00% 100.00% Not linked
2 ORI92310402 NC_010612.1 Mycobacterium marinum M 99.60% 100.00% Not linked
3 ORI97209107 NZ_CP058277.1 Mycobacterium marinum 98.10% 100.00% Not linked
4 ORI97262288 NZ_CP118910.1 Mycobacterium marinum 98.10% 100.00% Not linked
5 ORI97209660 NZ_CP083741.1 Mycobacterium ulcerans 97.90% 100.00% Not linked
6 ORI97227661 NC_020133.1 Mycobacterium liflandii 128FXT 97.90% 100.00% Not linked
7 ORI97249165 NZ_AP018410.1 Mycobacterium pseudoshottsii JCM 15466 97.90% 100.00% Not linked
8 ORI97252346 NZ_CP155055.1 Mycobacterium pseudoshottsii 97.90% 100.00% Not linked
9 ORI97255827 NZ_CP023138.1 Mycobacterium liflandii 97.90% 100.00% Not linked
10 ORI97294046 NZ_CM165904.1 Mycobacterium pseudoshottsii 97.90% 100.00% Not linked

The interactive Z-curves rotated at the maximum of the GC disparity.

RIP Sequence-Similarity Network

Bacteria Chromosomes 1,537 RIP sequence subfamilies from 66,403 proteins (Complete/Chromosome only) Accession: NZ_CP025779.1
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Replication Initiation Protein Information

Gene Start Gene End Translation
25 1557 MTNDPGSGFAAVWNAVVAEL...

OriC Visualization

OriC map
OriC sequences
dnaATCCGCGGCCAGCTCCAGTAATTTCTGCAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACGCCGGTGTGTGTGGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTCCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGACCACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGATGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTCCACAGCGCCGCATCGCAGCGCGTGTCGGCTGGCTTGTCGTCACTGACAGCGAGCTTTCAAGTTCGGGCTTGAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTAGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGCTTTACGGATTTTGAACTCATTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCAGCTCCAGTAATTTCTGCAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACGCCGGTGTGTGTGGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTCCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGACCACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGATGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTCCACAGCGCCGCATCGCAGCGCGTGTCGGCTGGCTTGTCGTCACTGACAGCGAGCTTTCAAGTTCGGGCTTGAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTAGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGCTTTACGGATTTTGAACTCATTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCAGCTCCAGTAATTTCTGCAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACGCCGGTGTGTGTGGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTCCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGACCACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGATGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTCCACAGCGCCGCATCGCAGCGCGTGTCGGCTGGCTTGTCGTCACTGACAGCGAGCTTTCAAGTTCGGGCTTGAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTAGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGCTTTACGGATTTTGAACTCATTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCAGCTCCAGTAATTTCTGCAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACGCCGGTGTGTGTGGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTCCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGACCACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGATGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTCCACAGCGCCGCATCGCAGCGCGTGTCGGCTGGCTTGTCGTCACTGACAGCGAGCTTTCAAGTTCGGGCTTGAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTAGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGCTTTACGGATTTTGAACTCATTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCAGCTCCAGTAATTTCTGCAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACGCCGGTGTGTGTGGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTCCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGACCACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGATGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTCCACAGCGCCGCATCGCAGCGCGTGTCGGCTGGCTTGTCGTCACTGACAGCGAGCTTTCAAGTTCGGGCTTGAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTAGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGCTTTACGGATTTTGAACTCATTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCAGCTCCAGTAATTTCTGCAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACGCCGGTGTGTGTGGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTCCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGACCACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGATGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTCCACAGCGCCGCATCGCAGCGCGTGTCGGCTGGCTTGTCGTCACTGACAGCGAGCTTTCAAGTTCGGGCTTGAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTAGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGCTTTACGGATTTTGAACTCATTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCAGCTCCAGTAATTTCTGCAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACGCCGGTGTGTGTGGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTCCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGACCACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGATGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTCCACAGCGCCGCATCGCAGCGCGTGTCGGCTGGCTTGTCGTCACTGACAGCGAGCTTTCAAGTTCGGGCTTGAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTAGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGCTTTACGGATTTTGAACTCATTGTTAGGTGAAGGGACGCAdnaN
dnaaTCCGCGGCCAGCTCCAGTAATTTCTGCAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACGCCGGTGTGTGTGGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTCCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGACCACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGATGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTCCACAGCGCCGCATCGCAGCGCGTGTCGGCTGGCTTGTCGTCACTGACAGCGAGCTTTCAAGTTCGGGCTTGAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTAGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGCTTTACGGATTTTGAACTCATTGTTAGGTGAAGGGACGCAdnan
dnaATCCGCGGCCAGCTCCAGTAATTTCTGCAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACGCCGGTGTGTGTGGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTCCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGACCACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGATGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTCCACAGCGCCGCATCGCAGCGCGTGTCGGCTGGCTTGTCGTCACTGACAGCGAGCTTTCAAGTTCGGGCTTGAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTAGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGCTTTACGGATTTTGAACTCATTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCAGCTCCAGTAATTTCTGCAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACGCCGGTGTGTGTGGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTCCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGACCACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGATGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTCCACAGCGCCGCATCGCAGCGCGTGTCGGCTGGCTTGTCGTCACTGACAGCGAGCTTTCAAGTTCGGGCTTGAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTAGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGCTTTACGGATTTTGAACTCATTGTTAGGTGAAGGGACGCAdnaN
dnaATCCGCGGCCAGCTCCAGTAATTTCTGCAAAAAACTTCTCTCACGTTAGTCACACGAGTTACACGACGCCGGTGTGTGTGGTCCTGTGCACAAACGGCTGCAGACATTCATGTAATTTCCGGACTGGAGTGCACACCGCCCGTCCCATCCCCAACAGGCCAACACAGACCACACAGCCACCCGCAGCCTGATCCACAGCCCCACCGGTCCTCTAGCTGCGTCAAGACCCGGCTGTCCCCAGAATTAACACCCCTTATTACTGTTATTGAGATCTCTTCGATGTTTGTTCTTTGAAGAACAGCGTTGGGGACATCCGCTCCACAGCGCCGCATCGCAGCGCGTGTCGGCTGGCTTGTCGTCACTGACAGCGAGCTTTCAAGTTCGGGCTTGAAGCTCTACGGTTGGTGTTCGACTGTCGTTGCGGACGTCTTAGGTGTAACTACACGCCACTGACGTACGAAGCGGTCAGTCCCACCTGCCGGCGGCAAAGTCGGCTCATGGCTTTACGGATTTTGAACTCATTGTTAGGTGAAGGGACGCAdnaN
5'-DnaA box-3'    3'-DnaA box-5'   Spacer   DnaA-trio   ATP-DnaA box
AT-rich region   GATC   CtrA binding motif   Fis binding site   IHF binding site

BLAST Results

Subject ID Identity (%) Length Mismatches Gaps Query Start Query End Subject Start Subject End E-value Bit Score
ORI92310402 99.63% 540 2 0 1 540 1 540 0.0 987.0
ORI60010254 97.41% 540 12 2 1 540 1 538 0.0 918.0
Found 2 BLAST matches
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