ORI97283834 | DoriC 14.0: an updated database of prokaryotic replication origins with significantly expanded plasmid oriV annotations

Basic Information

Assembly acc	`GCF_050917375.1`
Acc	`NZ_CP155806.1`
OriID	ORI97283834
Organism	Mycobacterium lepromatosis
Topology	Circular
Lineage	Bacteria ; Bacillati ; Actinomycetota ; Actinomycetes ; Mycobacteriales ; Mycobacteriaceae ; Mycobacterium ; Mycobacterium lepromatosis
Assembly Level	Complete
Literature linkage	Not linked
Chromosome size	3259657 nt
Chromosome GC content	57.89%
Indicator genes	dnaN 870351... 871550nt dnaA 872065... 873573nt rpmH 874176... 874319nt hemB 1229694... 1230683nt hemE 2528779... 2529852nt
OriC location	871550 ... 872064 nt
OriC Length	514 nt
OriC AT Content	0.5331

Comparative Sequence Support

Recurrence category Multi-accession

Sequence cluster BC-OH001385

Cluster members 5

Distinct accessions 5

Species / genera 2 / 1

Literature-linked members 0

Comparative Sequence Support describes recurrence of similar candidate sequences, not the reliability of the original prediction. Cross-taxon describes representation across source taxa, not experimentally measured host range; Singleton denotes one origin record under the current dataset and thresholds, not biological novelty. Accession counts do not establish independence of biological samples. Literature linkage is reported separately. The four origin categories are clustered independently.

Top 10 most similar Ori IDs

Rank	Ori ID	Accession	Organism	Identity	Reciprocal coverage	Literature linkage
1	`ORI97209654`	`NZ_CP083405.1`	Mycobacterium lepromatosis	100.00%	100.00%	Not linked
2	`ORI10010013`	`NC_002677.1`	Mycobacterium leprae TN	82.30%	100.00%	Not linked
3	`ORI97024466`	`NZ_AP014567.1`	Mycobacterium leprae Kyoto-2	82.30%	100.00%	Not linked
4	`ORI97030558`	`NZ_CP029543.1`	Mycobacterium leprae	82.30%	100.00%	Not linked
5	`ORI97011763`	`NZ_CP011883.2`	Mycobacterium haemophilum DSM 44634	77.70%	98.80%	Not linked

The interactive Z-curves rotated at the maximum of the GC disparity.

RIP Sequence-Similarity Network

Replication Initiation Protein Information

Gene Start	Gene End	Translation
872065	873573	MTDDPGLSFTTVWNAVVSEL...

OriC Visualization

OriC map

OriC sequences

dnaNGGCGCCCCTTCACCTAAAAATCGTTGAAATCCAACGGCTAGCCTCCCCTGCTAGCGTGGGTCCACTCTAACGAACGCCGATGACACACAGTGCACAACGACGTCCGTAACAGTAGTCGAAGAACAAACGTAGATCTTCGAGCGCCAACATAAAAGTTCGGTGTCAGCGGTGACAGCTGAGGTTGCCGTCTCATCAGGGCGACCGTATCCCCAGTGTTTTTTCAAATGTGAATATAGAGGAATTTTCATAGTGTCAGTATTAAAGGGTGTGGATCTTGGGGACAACCGGATTTTGTTGAGCTAGGAGAGCTGTTGAGGTGTGGATATCGGTGTTGATAATGAAAATTCTGAGATTTGTCGCTGTGGATCGATTGTGGGAGTGCACTAAATAGAAAATTTTTGCACATCAGCATACCTGGTTTGTCCACAGAAATACACACACCTTGGAGGTGTGACTGGTGTGACATAAGTGCAAGAAATTTTTTCTGACGGAGCTACGTGGTGTGCATTGAAAGdnaA

dnanGGCGCCCCTTCACCTAAAAATCGTTGAAATCCAACGGCTAGCCTCCCCTGCTAGCGTGGGTCCACTCTAACGAACGCCGATGACACACAGTGCACAACGACGTCCGTAACAGTAGTCGAAGAACAAACGTAGATCTTCGAGCGCCAACATAAAAGTTCGGTGTCAGCGGTGACAGCTGAGGTTGCCGTCTCATCAGGGCGACCGTATCCCCAGTGTTTTTTCAAATGTGAATATAGAGGAATTTTCATAGTGTCAGTATTAAAGGGTGTGGATCTTGGGGACAACCGGATTTTGTTGAGCTAGGAGAGCTGTTGAGGTGTGGATATCGGTGTTGATAATGAAAATTCTGAGATTTGTCGCTGTGGATCGATTGTGGGAGTGCACTAAATAGAAAATTTTTGCACATCAGCATACCTGGTTTGTCCACAGAAATACACACACCTTGGAGGTGTGACTGGTGTGACATAAGTGCAAGAAATTTTTTCTGACGGAGCTACGTGGTGTGCATTGAAAGdnaa

5'-DnaA box-3' 3'-DnaA box-5' Spacer DnaA-trio ATP-DnaA box
AT-rich region GATC CtrA binding motif Fis binding site IHF binding site

BLAST Results

Subject ID	Identity (%)	Length	Mismatches	Gaps	Query Start	Query End	Subject Start	Subject End	E-value	Bit Score
ORI92710483	82.50%	520	79	7	1	514	514	1	0.0	446.0
ORI10010013	82.50%	520	79	7	1	514	514	1	0.0	446.0

Found 2 BLAST matches

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